mRNA_E-siliculosus-1a_M_contig95.17509.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17509.1
Unique NamemRNA_E-siliculosus-1a_M_contig95.17509.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: D7G1V1_ECTSI (HSPC140 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1V1_ECTSI)

HSP 1 Score: 652 bits (1681), Expect = 3.180e-233
Identity = 334/342 (97.66%), Postives = 337/342 (98.54%), Query Frame = 1
Query:    1 MPGQGETMQNGSSGAADGGDQYINEDASEQYDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQGLSDPMDMEFPSLEEASAAEWSTLKDRWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAVIESALEKNGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTGEAKMFRAPRKAKA 1026
            MPGQ ETMQNGSSGAADGGDQYINEDASEQYDRQIRLWGVEAQQRMSGSRVLFSGINGVT EGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQ LSDPMDMEFPS+EEASAA+WS+LKDRWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAVIESALE NGLPPDFLGEAGPVAGGAAASLCATA AEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTGEAKMFRAPRKAKA
Sbjct:    1 MPGQDETMQNGSSGAADGGDQYINEDASEQYDRQIRLWGVEAQQRMSGSRVLFSGINGVTVEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQILSDPMDMEFPSVEEASAAQWSSLKDRWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAVIESALENNGLPPDFLGEAGPVAGGAAASLCATATAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTGEAKMFRAPRKAKA 342          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: A0A836CJW8_9STRA (ThiF domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJW8_9STRA)

HSP 1 Score: 309 bits (792), Expect = 1.010e-98
Identity = 165/329 (50.15%), Postives = 215/329 (65.35%), Query Frame = 1
Query:   43 AADGGDQYINEDASEQYDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQ--GLSDPMDMEFPSLEEASAAEWSTLKDRWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAVIESALEKNGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTGEAKMFRAPRKAK 1023
            AAD     +N+  SE YDRQIRLWGV+AQ+RMS S+VL++G  GV AE  KNL+LAG+ AT+QD  +A  +D+G NF L+ +DVGKNRA +     ++LN LA V +E R LEEL D +FK F  + LSGA   Q++R+  +CR      Y VE+FG+ G+L  DLG    YR+E+G+  GLSDP+ + FPS+EEA  A WSTLK+RWGP  K +  AQ++  F+EK GRRP  +D     +V +  L++NGLP DF      +A    A LCA A  E++PVCA+LGGILGQEVIKA+S KG PA N     G T E K+   P  AK
Sbjct:    3 AADPSSDALNDQESELYDRQIRLWGVQAQKRMSSSKVLYAGFTGVCAEAAKNLVLAGIHATIQDHRAATYADLGTNFFLTAEDVGKNRAASCQARLQQLNNLAKVDAEERSLEELEDAYFKQFTCICLSGAPLHQQKRIDGICRSAGVFLYVVESFGFYGYLMLDLGQGFSYRKELGENKGLSDPIPVAFPSIEEAVGAPWSTLKNRWGPVSKVYALAQLMLEFEEKHGRRPGASDGDTMTSVAQQCLKRNGLPTDF------IASDETAVLCAQAQVEINPVCAVLGGILGQEVIKALSQKGTPAHNVFLFDGTTSEGKVMLTPPAAK 325          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: A0A7S2UZW6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZW6_9STRA)

HSP 1 Score: 245 bits (625), Expect = 1.770e-73
Identity = 149/344 (43.31%), Postives = 196/344 (56.98%), Query Frame = 1
Query:   67 INEDASEQYDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQGLSD-------------------PMDM-EFPSLEEASAAEWSTLKDRWGPP----PKPFVTAQVVALFQEKFGRRPLPA----DTPECAAVIESALEKNGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTGEAKMFRAPR 1014
            ++E  ++ YDRQIRLWG+EAQQRM  SRVL  G+  + AE CKNL+LAGV+  LQD    + +D   N  +S +D GKNRAEA    A+ELN L +V  ET+PLE+L D FF AF VV +SGA+     R+ T+CR+    FY    FGYDG LFCDLGP+H + RE G   +                    P ++  +PSL++A   +WS L  R        PKPFV  QV+   +E+ GR P+      D  E   +    L+ N +PPDFL E           LC+ A  E+SPVCAI+GGI GQEV+KAIS KG P  N    +G++ E K+ R P+
Sbjct:    8 MDEVENQVYDRQIRLWGLEAQQRMRSSRVLICGMGCLNAELCKNLVLAGVNVCLQDHLPVEANDNAGNIFVSAEDNGKNRAEACVVRAKELNGLVNVDCETKPLEDLDDSFFTAFTVVCVSGASRKNMLRLDTICREAGTFFYAGTAFGYDGVLFCDLGPRHHFEREGGPKTAPAAPAPXXXXXXXXXGAQAAPGEVASYPSLQDALGTKWSVLTHRRRGKVYMAPKPFVLLQVLEELEEQMGR-PVKGMQEGDLNELVQISTRLLQDNEMPPDFLTEDD------LRILCSVANTEISPVCAIVGGIWGQEVLKAISRKGEPVNNFFVFSGISSEGKVIRLPK 344          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: W2NHS1_PHYPR (ThiF domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2NHS1_PHYPR)

HSP 1 Score: 226 bits (577), Expect = 1.160e-66
Identity = 135/307 (43.97%), Postives = 182/307 (59.28%), Query Frame = 1
Query:   91 YDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRRE-IG--QGLSDPMDMEFPSLEEASAAEWSTLKD---RWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAV--IESALEKNGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTG 987
            YDRQ+RLWGVEAQ+R+  SRVL SG+  + +E  KNL+LAG+  TL D  +  P+ I   F LS +D+GKNRAEA     +ELN L  VSSET+PL+EL D+FFK F VV L GA      R+ TLCR    AFY+  +FG+DG +F DLG +H +RR  +G     SDP+ ++FP+LEEA   +WS+L+    R    P+ FV  Q++  ++   G   +  D  E   +       + NGL  D+L            +L   A A++ P+CAI+ GI+GQEVIKAIS K  P CN     G+TG
Sbjct:   16 YDRQMRLWGVEAQKRLQNSRVLVSGLTALGSELVKNLVLAGMGVTLHDSQAVTPAAIATQFFLSEEDIGKNRAEACLPRVQELNPLVQVSSETKPLDELTDEFFKQFTVVCLIGAEQVTEFRLDTLCRSLGIAFYSARSFGFDGIIFADLG-EHTFRRNAVGADSAPSDPITVKFPTLEEAQKIQWSSLQSARKRAPQLPQVFVKNQLLQGYKSLKGMTKI-TDNQEVEFIHYAREQFQANGLEEDYLSP------DELQALLRVADADLVPICAIVAGIMGQEVIKAISQKDEPICNFFCFDGVTG 314          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: A0A7S2MAE5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MAE5_9STRA)

HSP 1 Score: 222 bits (565), Expect = 1.280e-64
Identity = 124/316 (39.24%), Postives = 177/316 (56.01%), Query Frame = 1
Query:   82 SEQYDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQGLS----DPMDMEFPSLEEASAAEWSTLKDRWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAVIESALEKNGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTGEAKMFRAPRK 1017
            SE YDRQIRLWGVEAQ+RM  S++L  G+ G+ AE  KNL+LAG+SAT+ D  +    D+ +NF L   D+GK RA A+    RELN   +V S    ++ LPDD  ++  ++V++ A   Q++R++T+ R    A+Y  + FG++G    DL  +H Y  E G G S     P  +E+PSL++     W+ L++RWGP    FV   ++  F+   GR P   D+ +   +    L +         +        A  L      ++SPVCAILGG++GQEV+K ISGKGAP  N   L  M  E K+FRAP K
Sbjct:   14 SELYDRQIRLWGVEAQKRMQSSKLLLVGLGGLGAEVLKNLILAGISATVVDGVTVTEGDLASNFFLDANDIGKPRATAALSRIRELNSFVTVESHVESVDNLPDDLIQSHNLIVVTQATLDQQKRLNTIARANKMAYYAADVFGFEGICLVDLC-RHEYHVESGTGESIKVDGPFQIEYPSLDDMLQTRWTALRNRWGPVSMVFVRYCILTQFRHTHGRTPTAQDSSQLEEIGHKILTEQAADGVTFNKED------AECLAGQQGVDLSPVCAILGGVIGQEVVKFISGKGAPIENIFVLNAMDSEGKVFRAPPK 322          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: A0A2P4Y9J7_9STRA (SUMO-activating enzyme (SAE) (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y9J7_9STRA)

HSP 1 Score: 221 bits (564), Expect = 6.560e-64
Identity = 139/334 (41.62%), Postives = 185/334 (55.39%), Query Frame = 1
Query:   91 YDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQGL--SDPMDMEFPSLEEASAAEWSTLKD---RWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAVIESALEK---NGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTGEAKM--------------FRAPRKAKA 1026
            YDRQ+RLWGVEAQ+R+  SRVL SG++ + +E  KNL+LAG+S TL D  S   +     F L+ +DVG+NRAEA     +ELN L  VSSET+PL +LPD+FFK F VV L GA  A   R+  +CR F  AF+   +FG+DG +F DLG     R  +G     SDPM + FPSLEEA   +WS+L+    R    P+ FV  Q++  ++   G + +  +       I+ A EK   NGL   +             +L   A  ++ P+CAI+ GILGQEVIKAIS K  P CN     G+TG  +               FR PRK +A
Sbjct:   13 YDRQMRLWGVEAQKRLQNSRVLVSGLSALGSELVKNLVLAGMSVTLHDTQSVTSTAAATQFFLTEEDVGRNRAEACLPRVQELNPLVQVSSETKPLSDLPDEFFKQFTVVCLVGAELATELRLDAVCRSFGTAFFAARSFGFDGIVFADLGDHTFRRNAVGADAVPSDPMTVTFPSLEEAQKIQWSSLQSARKRAPQLPQVFVKNQLLQGYKNLKGVKEITKNHE--VTFIQYAREKFQANGLDESYFSP------DELQALVRVADTDLVPICAIVAGILGQEVIKAISQKDEPICNYFCFDGVTGTVRRIGSVIYEEALRENDFRMPRKKRA 338          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: D0NVS3_PHYIT (SUMO-activating enzyme (SAE), putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NVS3_PHYIT)

HSP 1 Score: 219 bits (558), Expect = 6.890e-64
Identity = 136/308 (44.16%), Postives = 177/308 (57.47%), Query Frame = 1
Query:   91 YDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRRE---IGQGLSDPMDMEFPSLEEASAAEWSTL---KDRWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAVIESALEK---NGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTG 987
            YDRQ+RLWGVEAQ+R+  SRVL SG+  + +E  KNL+LAG+S TL D  +  P+ I   F LS +DV KNRAEA     +ELN L  VSSE +PL EL D FFK F VV L GA      R+  LCR    AFY+  TFG+DG LF DLG  H +RR    +    SDP+ ++FP+L+EA   +WS+L   + R    P  FV  Q++  ++     + L  +       I+ A E+   NGL  D+L            +L   A A++ PVCAI+ GI+GQEVIKAIS K AP CN     G+ G
Sbjct:   13 YDRQMRLWGVEAQKRLQNSRVLVSGLTALGSELVKNLVLAGMSVTLHDSQTVTPTAIATQFFLSDEDVDKNRAEACLPRVQELNPLVQVSSEIKPLNELSDAFFKQFTVVCLVGANQVTELRLDALCRSLGIAFYSARTFGFDGILFADLGD-HTFRRNTVGVDSAPSDPVTVKFPTLQEAQKVQWSSLNSARKRAPQLPPVFVKNQLLQGYKSHKDVKELTDN--HAVDFIQYAREQFQANGLDEDYLSP------DELQTLLRVADADLVPVCAIVAGIMGQEVIKAISQKDAPVCNFFCFDGVLG 311          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: H3GSN7_PHYRM (ThiF domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSN7_PHYRM)

HSP 1 Score: 213 bits (541), Expect = 1.400e-61
Identity = 129/303 (42.57%), Postives = 174/303 (57.43%), Query Frame = 1
Query:  103 IRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQGL--SDPMDMEFPSLEEASAAEWSTLKD---RWGPPPKPFVTAQVVALFQEKFGRRPLPADTPECAAVIESALEK---NGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTG 987
            +RLWGVEAQ+R+  SRVL SG++ + +E  KNL+LAG+  TL D   A  + +   F LS  D+GKNRAEA     +ELN L  VSSET+PL +LPD+FFK F VV L GA      R+  LCR F  AF+   +FG+DG +F DLG     R  +G     SDP+ ++FP+LEEA   +WS+L+    R    P+ FV  Q++  F+ K G + +  +       I+ A E+   NGL  D+L            +L   A A++ P+CAI+ GI+GQE IKAIS K  P CN     G TG
Sbjct:    1 MRLWGVEAQKRLQSSRVLVSGLSALGSELVKNLVLAGMGVTLHDTQPATSTAVATQFFLSEDDIGKNRAEACLARVQELNPLVQVSSETKPLADLPDEFFKQFTVVCLVGAELDAELRLDALCRSFGTAFFAARSFGFDGVVFADLGDHTFRRNAVGADAAPSDPVTVQFPTLEEAQKVQWSSLQSTRKRAPQLPQVFVKNQLLQGFKSKEGIKEITDN--HVVDFIQYAREQFRANGLDEDYLSPDD------LQTLVRVADADLVPICAIVAGIMGQEAIKAISQKDEPICNYFCFDGTTG 295          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: A0A3R7KPL9_9STRA (ThiF domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KPL9_9STRA)

HSP 1 Score: 212 bits (540), Expect = 3.340e-61
Identity = 128/305 (41.97%), Postives = 171/305 (56.07%), Query Frame = 1
Query:   91 YDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQGL--SDPMDMEFPSLEEASAAEWSTLKD---RWGPPPKPFVTAQVVALFQEKFGRRPLPAD-TPECAAVIESALEKNGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTG 987
            YDRQ+RLWGVEAQ+R+  SRVL SG++ + +E  KNL+LAG+  TL D      ++    F LS +DVGKNRAEA     +ELN L  VS ET+PL  LPDDFFK F VV L GA  +   R+  LCR F  AF+   +FG+DG +F DLG     R  IG     SDP+ M FP+LEEA   +WS+L+    R    P+ FV  Q++  ++ +     + ++   +      +  E  GL  D+L             L      ++ P+CAI+ GI+GQEVIKAIS K  P CN     G+TG
Sbjct:   15 YDRQMRLWGVEAQKRLQNSRVLVSGLSALGSELVKNLVLAGMGVTLHDDQLTNSANGSTQFFLSVEDVGKNRAEACLAQVQELNPLVQVSCETKPLSALPDDFFKKFTVVCLVGADQSSELRLDQLCRSFGTAFFAARSFGFDGIMFADLGAHTFRRNPIGADTAPSDPITMIFPTLEEAQKVQWSSLQSARKRAPQLPQVFVKNQLLQGYKTEKNVTSIGSEHVVDFIQFARAQFEVQGLDEDYLSP------DELQMLVRVVDTDLVPICAIVAGIMGQEVIKAISQKDEPICNYFCFDGVTG 313          
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Match: A0A0P1AQD9_PLAHL (Sumo-activating enzyme subunit 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AQD9_PLAHL)

HSP 1 Score: 212 bits (539), Expect = 5.910e-61
Identity = 134/308 (43.51%), Postives = 177/308 (57.47%), Query Frame = 1
Query:   91 YDRQIRLWGVEAQQRMSGSRVLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGKNRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQRRRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRRE-IGQGL--SDPMDMEFPSLEEASAAEWSTLKD---RWGPPPKPFVTAQVVALFQEKFGRRPLPAD-TPECAAVIESALEKNGLPPDF--LGEAGPVAGGAAASLCATAAAEVSPVCAILGGILGQEVIKAISGKGAPACNCVALTGMTG 987
            YDRQ+RLWGVEAQ+R+  S VL SG++ + +E  KNL+LAG++ TL D      +     FLLS  DVGKNRAEA     +ELN LA V  ET+ LE+  DD+FK F VV L GAA +   R+  LCR    AFY   TFG+DG +F DLG  + +RR+ IG  +  SDP+ + FP+LE+A   +WS+L+    R    PK FV  Q++  ++   G + +  D   +         EKNGL  D+  L E           L   A  ++ PVCAI+ GILGQEVIKAIS K  P CN     G++G
Sbjct:   23 YDRQMRLWGVEAQKRLQNSHVLISGLSALGSELVKNLVLAGINVTLHDLKITTHAAASIQFLLSDDDVGKNRAEACLPRVQELNPLAKVLCETKALEDYSDDYFKQFTVVCLIGAAQSTELRLDVLCRSLGIAFYAARTFGFDGIVFADLG-NYTFRRDAIGTDVATSDPIPVTFPTLEQAQKIKWSSLQSARKRAPQLPKVFVKNQLLQGYKSVKGIQKITEDLVVDFIRYAREEFEKNGLGDDYMTLDEL--------QQLLRAADIDLVPVCAIVAGILGQEVIKAISQKDEPICNYFCFDGVSG 321          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1V1_ECTSI3.180e-23397.66HSPC140 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1V1... [more]
A0A836CJW8_9STRA1.010e-9850.15ThiF domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2UZW6_9STRA1.770e-7343.31Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
W2NHS1_PHYPR1.160e-6643.97ThiF domain-containing protein n=8 Tax=Phytophthor... [more]
A0A7S2MAE5_9STRA1.280e-6439.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2P4Y9J7_9STRA6.560e-6441.62SUMO-activating enzyme (SAE) (Fragment) n=1 Tax=Ph... [more]
D0NVS3_PHYIT6.890e-6444.16SUMO-activating enzyme (SAE), putative n=1 Tax=Phy... [more]
H3GSN7_PHYRM1.400e-6142.57ThiF domain-containing protein n=1 Tax=Phytophthor... [more]
A0A3R7KPL9_9STRA3.340e-6141.97ThiF domain-containing protein n=4 Tax=Phytophthor... [more]
A0A0P1AQD9_PLAHL5.910e-6143.51Sumo-activating enzyme subunit 1 n=1 Tax=Plasmopar... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:406172..415077 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1029
Model size1494
Exons9
Ec32 orthologEc-07_004020.1
Ec32 ortholog descriptionUbiquitin/SUMO-activating enzyme E1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko00002,ko01000,ko01003,ko04121
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
CAZyGT58
COG Functional cat.H
EC2.4.1.258,6.2.1.45
EggNOG OGsCOG0476@1,KOG2014@2759
EggNOG free text desc.SUMO activating enzyme activity
GOsGO:0003674,GO:0003824,GO:0004839,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006464,GO:0006807,GO:0008022,GO:0008047,GO:0008150,GO:0008152,GO:0008641,GO:0009987,GO:0016567,GO:0016874,GO:0016877,GO:0016925,GO:0018193,GO:0018205,GO:0019538,GO:0019899,GO:0019948,GO:0030234,GO:0031510,GO:0031974,GO:0031981,GO:0032446,GO:0032991,GO:0036211,GO:0043008,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044388,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046982,GO:0046983,GO:0050790,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0071704,GO:0098772,GO:1901564,GO:1902494
KEGG ModuleM00055
KEGG Pathwayko00510,ko00513,ko01100,ko04120,ko05010,map00510,map00513,map01100,map04120,map05010
KEGG ReactionR06258
KEGG koko:K03845,ko:K04532,ko:K10684
Preferred nameAOS1
Seed eggNOG ortholog2880.D7G1V1
Seed ortholog evalue1.2e-186
Seed ortholog score659.1
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17509.1prot_E-siliculosus-1a_M_contig95.17509.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig95 406172..414612 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936518.2931383-CDS-E-siliculosus-1a_M_contig95:406171..4062341622936518.2931383-CDS-E-siliculosus-1a_M_contig95:406171..406234Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 406172..406234 +
1696251113.9371376-CDS-E-siliculosus-1a_M_contig95:406171..4062341696251113.9371376-CDS-E-siliculosus-1a_M_contig95:406171..406234Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 406172..406234 +
1622936518.3099961-CDS-E-siliculosus-1a_M_contig95:407454..4075651622936518.3099961-CDS-E-siliculosus-1a_M_contig95:407454..407565Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 407455..407565 +
1696251113.9590445-CDS-E-siliculosus-1a_M_contig95:407454..4075651696251113.9590445-CDS-E-siliculosus-1a_M_contig95:407454..407565Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 407455..407565 +
1622936518.3260822-CDS-E-siliculosus-1a_M_contig95:408227..4083561622936518.3260822-CDS-E-siliculosus-1a_M_contig95:408227..408356Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 408228..408356 +
1696251113.97279-CDS-E-siliculosus-1a_M_contig95:408227..4083561696251113.97279-CDS-E-siliculosus-1a_M_contig95:408227..408356Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 408228..408356 +
1622936518.3406672-CDS-E-siliculosus-1a_M_contig95:409175..4092851622936518.3406672-CDS-E-siliculosus-1a_M_contig95:409175..409285Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 409176..409285 +
1696251113.984448-CDS-E-siliculosus-1a_M_contig95:409175..4092851696251113.984448-CDS-E-siliculosus-1a_M_contig95:409175..409285Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 409176..409285 +
1622936518.3580484-CDS-E-siliculosus-1a_M_contig95:409887..4099951622936518.3580484-CDS-E-siliculosus-1a_M_contig95:409887..409995Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 409888..409995 +
1696251113.994578-CDS-E-siliculosus-1a_M_contig95:409887..4099951696251113.994578-CDS-E-siliculosus-1a_M_contig95:409887..409995Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 409888..409995 +
1622936518.378376-CDS-E-siliculosus-1a_M_contig95:410658..4107041622936518.378376-CDS-E-siliculosus-1a_M_contig95:410658..410704Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 410659..410704 +
1696251114.0047305-CDS-E-siliculosus-1a_M_contig95:410658..4107041696251114.0047305-CDS-E-siliculosus-1a_M_contig95:410658..410704Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 410659..410704 +
1622936518.39504-CDS-E-siliculosus-1a_M_contig95:411643..4117701622936518.39504-CDS-E-siliculosus-1a_M_contig95:411643..411770Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 411644..411770 +
1696251114.0197551-CDS-E-siliculosus-1a_M_contig95:411643..4117701696251114.0197551-CDS-E-siliculosus-1a_M_contig95:411643..411770Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 411644..411770 +
1622936518.4116325-CDS-E-siliculosus-1a_M_contig95:413399..4136231622936518.4116325-CDS-E-siliculosus-1a_M_contig95:413399..413623Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 413400..413623 +
1696251114.033348-CDS-E-siliculosus-1a_M_contig95:413399..4136231696251114.033348-CDS-E-siliculosus-1a_M_contig95:413399..413623Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 413400..413623 +
1622936518.4258509-CDS-E-siliculosus-1a_M_contig95:414501..4146121622936518.4258509-CDS-E-siliculosus-1a_M_contig95:414501..414612Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 414502..414612 +
1696251114.0481057-CDS-E-siliculosus-1a_M_contig95:414501..4146121696251114.0481057-CDS-E-siliculosus-1a_M_contig95:414501..414612Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig95 414502..414612 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936518.4398935-UTR-E-siliculosus-1a_M_contig95:414612..4150771622936518.4398935-UTR-E-siliculosus-1a_M_contig95:414612..415077Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig95 414613..415077 +
1696251114.0619743-UTR-E-siliculosus-1a_M_contig95:414612..4150771696251114.0619743-UTR-E-siliculosus-1a_M_contig95:414612..415077Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig95 414613..415077 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig95.17509.1

>prot_E-siliculosus-1a_M_contig95.17509.1 ID=prot_E-siliculosus-1a_M_contig95.17509.1|Name=mRNA_E-siliculosus-1a_M_contig95.17509.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=343bp
MPGQGETMQNGSSGAADGGDQYINEDASEQYDRQIRLWGVEAQQRMSGSR
VLFSGINGVTAEGCKNLLLAGVSATLQDQASAQPSDIGANFLLSGQDVGK
NRAEASADNARELNRLASVSSETRPLEELPDDFFKAFRVVVLSGAAPAQR
RRVSTLCRKFNAAFYTVETFGYDGFLFCDLGPKHVYRREIGQGLSDPMDM
EFPSLEEASAAEWSTLKDRWGPPPKPFVTAQVVALFQEKFGRRPLPADTP
ECAAVIESALEKNGLPPDFLGEAGPVAGGAAASLCATAAAEVSPVCAILG
GILGQEVIKAISGKGAPACNCVALTGMTGEAKMFRAPRKAKA*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig95:406172..415077+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig95.17509.1 ID=mRNA_E-siliculosus-1a_M_contig95.17509.1|Name=mRNA_E-siliculosus-1a_M_contig95.17509.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=8906bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:406172..415077+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCAGGGCAAGGCGAAACTATGCAGAACGGATCGTCAGGAGCTGCTGA TGGTGGAGATCAGGTATCGGGGGGTTGCTACGTAGCTCGTAGCCCGGTGT ATCCAACACCATTTTTTGAATTAGACGCTACTGCTGTGGTACTGTACAGC AGTGGGTGTACCAACCAAACCGCAGTATCATGACCACCACTCCCTTGCCT CTGCAGTCTTTCATCTCTGTTGTGCGTGTCAAGTGCGAAGATTGGCTCTA CCTGAACGCTTTTAGTGCCCTAAGAATATTTCAAAAAATGTTGTTGTCGG GAGGCCGGGAGATTGGATCGAAGACACATGTGCCTCCAACACATGCCGTT TTGGAGCATCGGTATGGCGTCCCCTGGACAGATTCATAGGACTCACAGAC CAATCGGACGTTCCGGACACGGGAAGACCGACCGCTATTTTTCTGGTTGG ACTGCGCCCTGACCCGTATTGCAGGAGATATAAGATATCACTAAAGTGAC GAATGTACAGGCAGCCATGTCACGGGAAGACGTGCTGCCCTGCTGCACGG TCCGCACCTCTCGGTTTAAATATTAGCTTCACCTCGTATAGAGGGCGTAG GTGGCATCATTACTGTAGATATCACACACCCGGACAAAGGTGCAAGAGTG CCGGGGCCAAGCAACACGTGAAGTAACCGCCTGACCCGCCAGACCTAAAC GTGGTAACCATGTGTCATGAGCTACTGTTTTCTTCTGCGTGTACCACACC GTGAGGTCACTTCATAAGCACATTAGCACCGCCGTAGAGAGCATTCGAGC ACGTAACCTCGACTGTTGCAGATCAGCTTGTTGCCGTGTCACTGGTGCGG AAGCCTGTCGTGGTCGCATGCTAATAGGCAACCCCAAGAGGGTACACCGT TCAAGCAAATATAACGGACCGAGAAGAATCAACGCTTGCGCGCGATAGTC TACGTTGTAAAACCACGTGTATCGTGAAAAGCACCACTCACCCTGAGTCA TACCTGAAACAATGATAACCCTTCAAAGTTATTCCCCTCGGACACACCCA CGAGTTTCTACAGGGTTTCATGAACCCCCCACAAAAACAGCAGTACGTGA TAATTGGACCATCGAGCTGCAAGGCCGGACCACCGACCCCGCTGTGTATG TAGTTGTCAGTCCCGGGCACAATTCCAGACTATATTCCAGGTTCAAGCAA AGCATCCCCTCCCCGCCAGGTGCACTGAACTGGAACCTCTGAATGTTTAT GTCGATTCTGCCCCCCCTCTTTCTCTTGCGCAGTACATAAACGAAGACGC TTCGGAGCAGTACGATCGCCAGATTCGTCTGTGGGGAGTGGAGGCGCAGC AGCGAATGAGCGGCTCGAGGGTGCTATTTTCGGGCATCAACGGGGTGGGC CATTTTTCCTCGTGTGTGGTTTGCGGGGGCGGGGCGCGGGGGGGGGGGGG TCGCGAAACCTTTCCCTGTCCGCACCAGTATGATGTGAGCGGTGCCAGCT GGTGCCGGGCGCGCGTGCTGGCGGAAGTAAGGGTTAGCTGGTGTAGCGGA CAGGATGGAACCCGACCATGAGACGTCGTGGACGAAAGATGTACCGTTGT CGTGTAATGTTTCTTGTTTTTGGGCTGGTTCGCATTTTGCTCCGTCTTCC GAAAGAAGGCTTATCGACATTCCGGGCGCAAGTATTGCAGCGGTTCAGAA CGGGGGCAGATTCAATGCTGGGTATTGATCGGCTGTAGAATCCGAGCTTC AGGAGCACTCCTCGCTGCTACCAACGCCACCCTGCGTCCTGGCTTCCGAA CCCTTGCGAGATTGTCGCGTGGAGACGTATTTCCTGGTTCTCAACCCCCC CCCCGAACCCCGAAGGTCGCTCACCCCGGCCAGCTCTATGACAACCCAAC CCCAACCGGTTGCCCGCGCTCCCTGCCCCCGGGCATGGGAATACGTGCCA CGCCCGCCAAGCGTTTTCCTTCGTGTGTGCCGAGCGCGGCCTTAACTCTC GTTCCCACCTCTTTTGCTTGCTCCCTCCCCTTCCGGTTGTTTTCGTCGCT TCGCAGGTGACCGCGGAGGGATGCAAGAACCTTCTCCTGGCGGGAGTTAG CGCCACCCTCCAGGACCAAGCCTCGGCGCAACCGAGCGACATCGGCGCCA ACTTCTTGCTCAGCGGCCAAGACGTGGGCAAGAACGTGAGACAGGTTTCA CTACTGTTGTGGTCGATGAATGTAGTAGCATTAAGAGGAAAAGATATTTT TAAGACGGGCGCAATGCTGGATGGCAGACGCGCAATGCTCAGCACTCGTA GTCATGAGCACGAAAGGTAGCGTGGTGGCTACGGCATTGTAACAGCGACG CAAGAGTGATGAGCAAAGCAGCAAGAATTTTCGGGCGCGTGGGGGTACAG TTGAGCGTAGGATAGCGTACCGCAACGTTGCAGCAACCAGCTAAGCCTCG GCTAACACTTCGGACCGATCTACAAGAATAGGAGGGGGCGACCAACCCCG CACCCTCGACGCGTTCCCCTGCGGTAGTCCAGCAGTGCACCAGAGAAATA TCGCGTGCTACGTGTGTGTAGAACGCTGTGGGCGGGCCGTCTTCCTTTCA CGCAAAGGCAAGTGCGCCCGTCCAGCATCTTATCCCGCCACGCGCTGCCC TCTGTATGCCACGCGCGTGGTGCACAGCAGTAGGCGATCACGGAGTGTAC CTCTCAAAGTCTGGGTCGCGGGTGTGTACGTGCCCGTAGTTGCACGTGTC GACCCCGGGGTTGCCCGGGACATGTTTCTGCGGGCAACCTAGGACGCCCA CTGCGACAAAGCAAGAAAACGACCGCCCGTTCTATTCCTCCAGCGAACCC CTCTGCGTTTTTCCCCTCAGGGGGCACAGACAACCGCCGATTGCTTGCCC CTGCCCCCCCCCTCCCCAACGGCCAGTGCACTAAAATGGTGAGAGGTACA TGGACACAACCTCATGCCCCAACCCCCACCTCTGTTGTGAATTGATTGAA AAAGCGCGCGGAGGCTAGCGCGGACAACGCGAGGGAACTGAACCGGCTGG CGAGCGTGTCGAGCGAGACCAGGCCGCTGGAAGAACTGCCGGACGACTTC TTCAAAGCTTTCCGGTAGGGTAGAGGAGAAGTGTTGCGGGGGATATGTTC TTGTCGTTGTATTTTCTTACAACGGAGGTAGATGGTGAACACTTGCAGCG GTAGTAGTCTTCGTCTGCGGGAGGATTGAGGAGGTGTGTGTGTTGTGCCG CCCGGGCCGCGAGTTGCCTGTTGCCTGGACGAATTCCTTCCTCCTTGATT TTCCCACCTTCTACAACATATTGCGCGATGAAACGACCTTCCTTCTGCTC CACTCGGGGGACCGGGGGTCAGGAACCTACCTCAAAGGCGGGGGGGGGGG GGCTTGTCTGAGGCTCCACCCCACCCCTCCCCCCTCACTCCATGGAACCC AGCTCAAGCGCCAATGGCTGTGTTAATTATTTTTTGTTGAGTTGCTGTGT GAAGCGAACTGGTGACCCCAAGGTGGGAAGACGTAGACGAAATACATGCG TGCTCTTTTTTTGGCCACGTGACGTTTATTCGGAATCGGCGGCGCCCGTA CGACGTGGTCGTCCGGTGCGATTCCGAATGGTCGCAAGTCTTCTGTTCGG CGTTGTTGACTACTGTGTGCATGTGTTCGGTGTGCGGGTCTCTGATTTTT CGGATGTACTCGGCAGGGTGGTGGTGCTGAGCGGCGCGGCGCCGGCACAG CGGCGGCGAGTCTCAACGTTGTGCCGGAAATTCAACGCGGCGTTCTACAC GGTGGAGACGTTCGGCTACGACGGGTAAGCAGAGACGACGACACGTGTTT CTTCTCTTTCCGTTTTGAAAGTAGTTGTGTCGCGGTCCATCTCGCTGCCG TTTTGTTTTTTCGGGGGTGGGGTATGCTTTTGATGCGCTGTAATAACACG CGAAGAGGCTGAGAGAGATGGTAGCCTGACGCTGCTCGAGAGCGGAACTA TCTGTTGTTCTCGCTATCAATGGCGCCTTGCTTCCGCGGGAAGTTGCGGT TCGCGCACGCCGCCATCGCCGGAAGTCTTGCCAGTCGCGGTGCCCCTCGT CCCCAAGCAAGCACAGTCCGTAGGTGTTGTGTTGTCATACCCCCTCCATA CCTACTGCGCACCCCCCACACGGCGAACGCCGTCCTATCAACTGTTAGAT ATGCACTTTCCTGGTGATGGGTTGCGCGGCATTGTGCGTCGTTGTACTTT CGGAGGCATCGCGACCGACATGGGTGTCTGTGTTTTTCTGCAGCCGCGTG TCCCCACGCCCCGCGAACCGTCGAGGCTGTCGCATAGTGCAGTCAATGCT CGTTGCCGATTGCTTTTGTGACATGCACCGCTGTTGACATGGGCATTGTG TTCGGCTCCTTTGCTGCTGCTGCTGTTGCTGCTGCCGCTGCTGATTCCAC GGGGCCCACGTGGTTTCACGGTGTTTTTGTTTGGCAGGTTTCTGTTCTGT GATCTGGGTCCGAAACACGTCTATCGCAGAGAGGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTCACGTCGAACTTGTAACACTGGCCGAGCTGG CCGGCTATGTAGTGCGTTGACGTCCGTCTCACTACGGGATAATGATATGT GTGCGTGTGAGATGGTGCTTGCAATAGCGAGGGCGGGAAAGGGGGCAAGA CAGGAAGACAGATAGACAGACAGACGAAGACACAGCACGGGGGAATTTGA CAGAAGTAGTACATGTGGGTCACAGCGGCGTACACCAGATCAGAACGTAT CACACTTGACCCCACCAGGCAACACGAGCCCTCATTTCTGGCATTTATGT CAGCAGGACCAGCTTCGATGTACCCCTCCCTCCAATTTTTTTCGCTGGCA AACAGGAACTCCCCGTCAAAACTCAGACCAACCTCTGTCATGAGAGCAAA CCGAAATCAGACCTGCTGCCGTTGGGGGGTTGCAGCGACAATAGCTTCTT CGAACAACGGCTACTGCTCCGCTGTCTCGCTGTTCCTTTGTGAACGGTGG TGACGGTGGTGGTAGGCAAAGCACCGGCATGGCGGATAGACCAGAGAGCT ATAATAGCGAATTCCTCCCGGAATACGTTGAACCGGATGATCGGGTCTTT GTGCTGAGCTGGAGTGCCAAGCCTACCTTCCCACTTGCCGGACTCTGGTG TTTTCCTCCATTGGTCTCTCTCTGCGGATGAAAGCGAGGTGGCGGCGGAG GCGTGTTTGTACGGAGCAGGTATTCGCGACCGGATGGGAGAGCAAACGGC GTGGAACGAGCGATCTGCTCTCGTCGTGCGAATCACCGTACAGACGGTCT GCAAAACTGTGGACGACTTCATTGCTTTGTGCTGATTCCACCTCGTTTCT TTCCTCATTGTGTATTGCCTGTTTTTGATTGGTGTGAACGAACGATGGTT GGTGGGGGGGGGGGGTCTACAGATCGGACAGGGCCTGAGCGACCCCATGG ACATGGAGTTCCCGAGTCTAGAGGAGGCGTCCGCGGCCGAGTGGAGTACC CTCAAGGACCGATGGGGCCCGCCCCCAAAGCCGTTCGTCACGGCACAAGG TGTGTCGCTCTACGTAGTGTATTTTTTTTTCAGCCAACGTGTGCGCGTCA ACTTGTTCTTTTTTATTTTCGCGCTTGCCTGGATCGGGTATGTTTGTTTC TGTGTGTTTGGGTAGTACTTCACTTGGTCTCGATACCGCTTGTGGAGCTG AACCACGACGAGTGAAAAATGATTGGGTGGGAGTGCATCATGGTACCGCC GGGCTTCGGGTGATACGCTGCCCCCGCCCCGTGCGGCAGGTACTCGCGGC CCACGAGGTGAGTTGGGGGCGGAAACACTCAACCACGCGCTCGTAGTGAC GCCTCGGAAGGACGTCAGGTCATGCTGGAACCGAATTAGCTGACATCAAC ACCGCGAACATGCATCGAGCAACCCAGCAGTTAGAAGTCCGCACGTGTGT TGCTTCTCGACGACAGCGTCAGCCGCCCCCTGGCCGTAGCCATCGCAAGT GTAACGCTATCCCGCCTCCACAATGCGTGGCCCTTGCAATGCCCAGGAGT AACCTCCACAGAAGACGCGCACTTTTGGTGATTTTTGCACGAGGAAGTCG GAAGATTGGGCCGTCGGCGATGTCCATTGTCGCAGAGCAGGACCCGTCCG TCAGATCTCCCAAGTCTCCGTTTTTCTTGTAGTGTGCGCGTGGGTCCCAT CTACACCCTGACCCCGAGTCTACACACAAACCTTTCGGTGTATATGTGTA TGTATGTGTTCGATGCATCAACCAGTGTCACACAAGAACGGAGCTTTCGT TGGGTTTTTTTGTGTTGTTGTATTACCCCGCATTTCCTCGTGCGGCGCTT GCCTCAGTTTTTTTCGCGGGAAGATTTCAGCTATCCCGTTCCCTCGGCAA CCGTCAAGTCGAAGTGCGTAATGCACACTCGCGAAAGAAATCGTTCTTCC ACGCGAATTTTCACTTTCCACTCCACAGAAAGAGAGTCCAACTCACAAAC TGCTGCTGGTATCTGTACGGCGGTTTTACCGCTAGACCACAAGGGGTGAC CGGGCTGTCGTGCTCGTGCAGAAAGGCGTGGCACGAATGAGATGGACCAA AAGGTTGCGACGGCGCCCTCCACAGATCGGCGTTCGCGGTGACGAACGGT CTTGCGCCTTCCATGCGGGTCGATGTGCACCTCGGCCTCTGGTTGCGGTT GGACGCGAACCGGCCTACTTCCTCTTTCTCTGCCCCCTGGGGCACCCGGC AGAAAATTGCAGCCCCTCCTTCCCGCCGAAACGAAGAGGAAATGGAACAC GACTAGTCGTTATAACGTCGTTTGCTTGCAAGAACGGCGGAGAAGCCGTG GCAGGGGTGTTGGCTGTGGTTATGACCAACGGAGTGGTGCTGCCTACGTC TTGAAGAGTAGCCATGGGAGGGAAAAACAGATGCACCCACGTCGCAACCA CCCATGTCTGTGCACAACCGCTGCAGTTTGGGTTTGTTACTTCATTTTTC TTGGTAGCGCGGACGGCCGTAGCCGTCTGACCGCTCGGACGCCTTGGAGG ATAGCGGGCGTTGCAGTTCCCGTTTCTTTGTCTATGTATGTGTTGCTTTG TCCTCATCGGTGTTGCTGTTGCTGCCACGGCTGTTTCTGTTGCTTTTTCG CGACGGCGGCATTCTCTCTCTCTCTCAGTCGTCGCCCTGTTCCAGGAAAA GTTCGGCAGACGGCCCCTCCCCGCGGACACGCCGGAGTGCGCGGCCGTCA TCGAAAGCGCCCTGGAGAAGAACGGCCTGCCTCCGGACTTCTTGGGAGAA GCGGGGCCCGTTGCGGGCGGGGCGGCGGCCTCCTTGTGCGCCACGGCCGC GGCCGAGGTCTCTCCCGTGTGCGCCATCTTGGGGGGCATTTTGGGGCAGG AGGTAAGCAAGCGAGCAGTGGCCTTGGCAGGATTTTTCGATCACGTACAT GTAAAACATGTTGGATAAAGCATACAATCGGGTAAGTTGGGTTAGGGTTA GGGTTAGGGAATAGGGTCTGCGTCGCCCCCTCCCCGTTCTGTTTCCTCAT GGACGTATTCATCTCGCGAAGGCGGCCCCAAGCGAGGTGAAGGTACGCGG GTGTGCCGGGCAGGGGTTGGGGTTCCTGTCGCTCGGTTGCGCAACTGAAG CCGCGATATACATAGCCCGAAAAATGAAATTGACAAGAGGCGAGGACACT CTCGCGACGGCAGAAAACTATTGATAGATAACACGCGTGGATTTTTTTTT TTGTGGTAGGCAGGTGACGGCGTTGTCCTCATCGGGGGTAGCGACAAATG CTGATACTGCCACACTTGTCTTGCCTGTCGGGACAGCAGCGTGCGTGGAA ACGACGTTCCATAGATCTTGCACAACGGGTTGCCGTGCCGCAGGGCCTTT GTGGGAGCACAGCACACGTATGAATACAAAGCACGCCTAGAGGTCCCATG TGGGCGCCTGTGGGTACTGACGCATTCCTGCTTATTTTATTTTTTTTTGC TTCTACGTTGGATACTTCATGAACGGTGACCCCGAGACATTTATACAAGC AATCAACCGTTTCGTGTCAACAAGTCGCTCTTGGGTTGGGGCAAGTCATC GTTCGTGTTGTCCACCTGTACAGCAGTAGTAGTAGCGTCTACAACAATCG ATACAAATATCTCCCAATATCGTCATGCCTTCTGTGTGTCTCAGGCAAAA CCCTTTTGGTCAAGACACCAAGCCAAATTGTGATCACACCTTGTCCGCTG TACTCGCACTGCGTGTTTGGGGTCATGCAGGTCATCAAGGCTATTTCCGG CAAGGGTGCGCCTGCTTGCAACTGCGTGGCTCTGACAGGGATGACCGGAG AGGCCAAGATGTTCAGAGCCCCCAGAAAGGCAAAGGCCTAGTCGTCACAA CCTATAATAGAGTCTTCTTTCTCCAATGGTACCCTTTAACTACTGCTGTG ATGTGGTGAAAAGGAATGGCAGCGAGGCAATTTTGGGTCGCCTGGGGGGA GTTGTACCAAGGTGGATCGCTTCTTGCGGACGGAGTCGCGGGAGTTGAAG GCGCCCAGCATGGATCTCGGCGAGCAACGACTGACTTTTAGCATCTATCT CGCTTGCGCACGGGGATGGCTGGTGTGTGGCTAGATCAATGCTTGCGAGA AAGAAGGAGTGTGCGAGGTGCAAGAGAAAGAAGTGGGTGCAGCAGCACCA GCCGGACCATTGACAAGCTGACAAGAGGCCGAAGGTGTCGTGCTGTCGAA CATTTGATTTTAAACGGTCACAGCGGACCGCAGTCGAATTTGTTTCAATG CAAGCGATTTTGGCCTGTGGTGCGCGGAGAACATCAAATAAATGCTGATT CTGGGC
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:406172..415077+

>mRNA_E-siliculosus-1a_M_contig95.17509.1 ID=mRNA_E-siliculosus-1a_M_contig95.17509.1|Name=mRNA_E-siliculosus-1a_M_contig95.17509.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2058bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:406172..415077+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCCAGGGCAAGGCGAAACTATGCAGAACGGATCGTCAGGAGCTGCTGA
TGGTGGAGATCAGATGCCAGGGCAAGGCGAAACTATGCAGAACGGATCGT
CAGGAGCTGCTGATGGTGGAGATCAGTACATAAACGAAGACGCTTCGGAG
CAGTACGATCGCCAGATTCGTCTGTGGGGAGTGGAGGCGCAGCAGCGAAT
GAGCGGCTCGAGGGTGCTATTTTCGGGCATCAACGGGTACATAAACGAAG
ACGCTTCGGAGCAGTACGATCGCCAGATTCGTCTGTGGGGAGTGGAGGCG
CAGCAGCGAATGAGCGGCTCGAGGGTGCTATTTTCGGGCATCAACGGGGT
GACCGCGGAGGGATGCAAGAACCTTCTCCTGGCGGGAGTTAGCGCCACCC
TCCAGGACCAAGCCTCGGCGCAACCGAGCGACATCGGCGCCAACTTCTTG
CTCAGCGGCCAAGACGTGGGCAAGAACGTGACCGCGGAGGGATGCAAGAA
CCTTCTCCTGGCGGGAGTTAGCGCCACCCTCCAGGACCAAGCCTCGGCGC
AACCGAGCGACATCGGCGCCAACTTCTTGCTCAGCGGCCAAGACGTGGGC
AAGAACCGCGCGGAGGCTAGCGCGGACAACGCGAGGGAACTGAACCGGCT
GGCGAGCGTGTCGAGCGAGACCAGGCCGCTGGAAGAACTGCCGGACGACT
TCTTCAAAGCTTTCCGCGCGCGGAGGCTAGCGCGGACAACGCGAGGGAAC
TGAACCGGCTGGCGAGCGTGTCGAGCGAGACCAGGCCGCTGGAAGAACTG
CCGGACGACTTCTTCAAAGCTTTCCGGGTGGTGGTGCTGAGCGGCGCGGC
GCCGGCACAGCGGCGGCGAGTCTCAACGTTGTGCCGGAAATTCAACGCGG
CGTTCTACACGGTGGAGACGTTCGGCTACGACGGGGTGGTGGTGCTGAGC
GGCGCGGCGCCGGCACAGCGGCGGCGAGTCTCAACGTTGTGCCGGAAATT
CAACGCGGCGTTCTACACGGTGGAGACGTTCGGCTACGACGGGTTTCTGT
TCTGTGATCTGGGTCCGAAACACGTCTATCGCAGAGAGGTTTCTGTTCTG
TGATCTGGGTCCGAAACACGTCTATCGCAGAGAGATCGGACAGGGCCTGA
GCGACCCCATGGACATGGAGTTCCCGAGTCTAGAGGAGGCGTCCGCGGCC
GAGTGGAGTACCCTCAAGGACCGATGGGGCCCGCCCCCAAAGCCGTTCGT
CACGGCACAAGATCGGACAGGGCCTGAGCGACCCCATGGACATGGAGTTC
CCGAGTCTAGAGGAGGCGTCCGCGGCCGAGTGGAGTACCCTCAAGGACCG
ATGGGGCCCGCCCCCAAAGCCGTTCGTCACGGCACAAGTCGTCGCCCTGT
TCCAGGAAAAGTTCGGCAGACGGCCCCTCCCCGCGGACACGCCGGAGTGC
GCGGCCGTCATCGAAAGCGCCCTGGAGAAGAACGGCCTGCCTCCGGACTT
CTTGGGAGAAGCGGGGCCCGTTGCGGGCGGGGCGGCGGCCTCCTTGTGCG
CCACGGCCGCGGCCGAGGTCTCTCCCGTGTGCGCCATCTTGGGGGGCATT
TTGGGGCAGGAGTCGTCGCCCTGTTCCAGGAAAAGTTCGGCAGACGGCCC
CTCCCCGCGGACACGCCGGAGTGCGCGGCCGTCATCGAAAGCGCCCTGGA
GAAGAACGGCCTGCCTCCGGACTTCTTGGGAGAAGCGGGGCCCGTTGCGG
GCGGGGCGGCGGCCTCCTTGTGCGCCACGGCCGCGGCCGAGGTCTCTCCC
GTGTGCGCCATCTTGGGGGGCATTTTGGGGCAGGAGGTCATCAAGGCTAT
TTCCGGCAAGGGTGCGCCTGCTTGCAACTGCGTGGCTCTGACAGGGATGA
CCGGAGAGGCCAAGATGTTCAGAGCCCCCAGAAAGGCAAAGGCCTAGGTC
ATCAAGGCTATTTCCGGCAAGGGTGCGCCTGCTTGCAACTGCGTGGCTCT
GACAGGGATGACCGGAGAGGCCAAGATGTTCAGAGCCCCCAGAAAGGCAA
AGGCCTAG
back to top