mRNA_E-siliculosus-1a_M_contig95.17494.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: D7G1T8_ECTSI (Thioredoxin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T8_ECTSI) HSP 1 Score: 443 bits (1140), Expect = 6.280e-148 Identity = 246/275 (89.45%), Postives = 248/275 (90.18%), Query Frame = 3
Query: 516 PTGAAYAQAREQEKQRKKAIRDQRRAAEAATREEDAELAAQMKASARLNGEVDSEDEEXXXXXXXDVDSDDELLAGLDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRDAPEGTGPREQGGYTGAIRAGLNDGEFSDEDG 1340
PTGAAYAQAREQEKQRKKAIRDQRRAAEAATREEDAELAAQMKAS XXXXXXX DELLAGLDADPEICRIRESRLRE+KRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQ VKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRDAPEGTGPREQGGYTGAIRAGLNDG+FSDEDG
Sbjct: 52 PTGAAYAQAREQEKQRKKAIRDQRRAAEAATREEDAELAAQMKASXXXXXXXXXXXXXXXXXXXXXXXXXDELLAGLDADPEICRIRESRLRELKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQ---------VKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRDAPEGTGPREQGGYTGAIRAGLNDGDFSDEDG 317
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: A0A835YQ77_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ77_9STRA) HSP 1 Score: 239 bits (611), Expect = 2.200e-69 Identity = 137/274 (50.00%), Postives = 173/274 (63.14%), Query Frame = 3
Query: 516 PTGAAYAQAREQEKQRKKAIRDQRRAAEAATREEDAELAAQMKASARLNGEVDSEDEEXXXXXXXDVDSDDELLAGLDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRDAPEGTGPREQGGYTGAIRAGLNDGEFSDED 1337
PTG AY + +E+ +R AI+ Q A +A E+ EL Q++A L+ + D DDE L GLD DPE+ RIRE+RL ++K H+AR+ N+AKGHG+YRE+ QDEFLPEVTSS +VV HFYH DFQRCK+MDM L LAP HLE KF++I+AEKAPFFVQKLQ V++LP V+ F DG++V I GF+GL DEWP NLA+ LALAKAI Y+ DA + + +G IRAG D E SDED
Sbjct: 71 PTGLAYQREKEENAKRAAAIKSQEDALKAEQDAEEQELQQQLQAHRLLD----------------ESDDDDEYLEGLDDDPELERIREARLAQLKAAHDARSSNLAKGHGRYREVTQDEFLPEVTSSARVVAHFYHNDFQRCKIMDMHLERLAPAHLEAKFIKINAEKAPFFVQKLQ---------VRVLPCVVIFRDGISVAQIQGFEGLNEEQEKGTEDEWPTGNLAKRLALAKAIDYTASDALD---QMRKAQVSGVIRAGFGDAELSDED 316
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: A0A6G0X4T8_9STRA (Thioredoxin domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X4T8_9STRA) HSP 1 Score: 186 bits (472), Expect = 6.450e-50 Identity = 98/178 (55.06%), Postives = 126/178 (70.79%), Query Frame = 3
Query: 717 DSDDELLAGLDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHN-IIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRD 1247
D DDE L LD DP+ R+RE RL++++ ++ + EN+AKGHG+YREIVQDEFL EVTSS +V+VHFYH+DF+RCK+ DM L ++A RH+E K L+IDAEKAPFFV KL V++LPT+I F +GVA N IIGF+GLT G+ DE+P NLAR LA AI + D
Sbjct: 91 DDDDEFLDELDQDPDFMRLREMRLKQLQDQYKIKQENLAKGHGEYREIVQDEFLKEVTSSPRVIVHFYHRDFERCKITDMHLAKIAKRHIECKVLKIDAEKAPFFVSKLV---------VRVLPTIILFEEGVANSNRIIGFEGLTDGVRAGAEDEFPTGNLARRLAKIGAIDSADDD 259
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: A0A7S2RBF7_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBF7_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.220e-49 Identity = 113/253 (44.66%), Postives = 154/253 (60.87%), Query Frame = 3
Query: 498 DLVVPKPTGAAYAQAREQEKQRKKAIRDQRRAAEAATREEDAELAAQMKASA-RLNGEVDSEDEEXXXXXXXDVDSDDELLAGLDA--DPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAV--HNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQ 1241
D V +PTGAAY A QE+ R++A+RDQ +AA A + DA+ A+++A +G D EDE +VDSD LL L++ DPE+ IR R++++K H A+ ENI KGHG EIVQDEFLP +TS+ + V HFYH DF RCK+MD L LA HLET FL+I+A+KAPFF +KL +++LPTV+CF DG ++IGF GL D+ D+WP + L +L I Y++
Sbjct: 58 DASVDRPTGAAYTAAAAQERDRRRALRDQEQAAAYAADQADAQREAEVRAHFFAQSGNSDEEDE----GGDEEVDSDXXLLDELESSEDPELLAIRNLRMQQLKSEHTAKMENIRKGHGSLTEIVQDEFLPRITSAARAVCHFYHNDFHRCKIMDKHLSILAQTHLETLFLKINADKAPFFCEKLN---------IRVLPTVVCFFDGKTKPEQHVIGFSGLAQEADTDQ-DDWPTTRLEAKLGEIGVIDYTK 296
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: A0A024ULN7_9STRA (Thioredoxin domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024ULN7_9STRA) HSP 1 Score: 181 bits (459), Expect = 4.700e-48 Identity = 99/207 (47.83%), Postives = 136/207 (65.70%), Query Frame = 3
Query: 717 DSDDELLAGLDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHN-IIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRDAPEGTGPREQGGYTGAIRAGLNDGEFSDE 1334
D +D LD DP+ R+RE RL++++ ++ +AEN+AKGHG YREIVQDEFL EVTSS +V+VHFYH+DF+RCK++DM LG A RH+E K L+IDAEKAPFF+ KL V++LPT+I F +G+A + I+GF+GLT +P DE+P NLAR LA A+ + D R+ +I+ GLN G +D+
Sbjct: 92 DDEDXFDXDLDQDPDFIRLREIRLKQLQEQYKLKAENLAKGHGDYREIVQDEFLKEVTSSARVLVHFYHRDFERCKIIDMHLGRFAKRHVEVKVLKIDAEKAPFFISKLV---------VRVLPTIIFFENGIANDDRIVGFEGLTDDVPLGHEDEFPTVNLARRLAKIGALNSADDDXXXXXXGRKD--KRSSIQQGLNRGYDADD 287
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: W4G8Q5_9STRA (Thioredoxin domain-containing protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G8Q5_9STRA) HSP 1 Score: 181 bits (459), Expect = 5.720e-48 Identity = 99/200 (49.50%), Postives = 135/200 (67.50%), Query Frame = 3
Query: 744 LDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHN-IIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRD--APEGTGPREQGGYTGAIRAGLNDGEFSDE 1334
LD DP+ R+RE RL++++ ++ +AEN+AKGHG YREI+QDEFL EVTSS +V+VHFYH+DF+RCKVMDM LG +A RH+E K L+IDAEKAPFFV KL V++LPT+I F +G+A ++GF+GL LP + DE+P NLAR LA A+ S +D A + G + +I+ GLN +D+
Sbjct: 104 LDQDPDFMRLREVRLKQLQEQYKLKAENLAKGHGDYREILQDEFLKEVTSSARVLVHFYHRDFERCKVMDMHLGRIAKRHVEVKVLKIDAEKAPFFVAKLV---------VRVLPTIILFENGIANDTRVVGFEGLADDLPLGREDEFPTVNLARRLAKMGALNSSDQDEDAEDHDGSCRRQDNKPSIQQGLNRSYDADD 294
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: A0A4D9DBW2_9STRA (Thioredoxin domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBW2_9STRA) HSP 1 Score: 181 bits (459), Expect = 1.020e-47 Identity = 117/271 (43.17%), Postives = 154/271 (56.83%), Query Frame = 3
Query: 465 RERTNERTN---------ERDLVVPKPTGAAYAQA----REQEKQRKKAIRDQRRAAEAATREEDAELAAQMKASARLNGEVDSEDEEXXXXXXXDVDSDDELLAGLDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHNIIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYS 1238
R++ +ERT + D V PTG+AY Q R Q+ + + IR + A A R+E E+ +++ S L+ E D E E+ DPE IRE RL +K H+ +A+N++KGHGQYREI QDEFLPEVT S +V+VHFYHKDF RCK+MD L LAP H+ETKFL+I+AEKAPFFV KL VKILPTVI F D +A + GF+GL G + DE+P + +A L +AI Y+
Sbjct: 36 RQKNDERTAALQSGASVPDEDASVDGPTGSAYRQVEARKRAQQHRAQARIRKSKEQAVDAARQE--EIVQKLQESHLLSDEEDDEAEDSL-------------------DPEFKLIRERRLAALKAQHQEKADNMSKGHGQYREITQDEFLPEVTGSRRVLVHFYHKDFMRCKIMDKHLASLAPTHIETKFLKINAEKAPFFVGKLH---------VKILPTVIFFKDSIAEERLQGFEGLADGQSKGQEDEFPTARVAARLGKLEAIDYT 276
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: A0A067CJU1_SAPPC (Thioredoxin domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CJU1_SAPPC) HSP 1 Score: 180 bits (456), Expect = 1.070e-47 Identity = 98/207 (47.34%), Postives = 135/207 (65.22%), Query Frame = 3
Query: 717 DSDDELLAGLDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHN-IIGFDGLTAGLPPDKLDEWPLSNLARELALAKAIIYSQRDAPEGTGPREQGGYTGAIRAGLNDGEFSDE 1334
+ DD+ DP+ R+RE R+++++ + + EN+AKGHG YREIVQDEFL EVTSS +VVVHFYH+DF+RCK++DM + ++A RH+E KFL++DAEKAPFFV KL V++LPTVI F DG+A + I+GF+GLT GL K DE+P NLAR LA AI + +A ++ +I+ + G SDE
Sbjct: 90 EDDDDFEXXXXXDPDFLRLRELRMKQLQEQYRVKQENLAKGHGDYREIVQDEFLKEVTSSPRVVVHFYHRDFERCKIIDMHMAKVAKRHIECKFLKLDAEKAPFFVTKLV---------VRVLPTVIYFKDGIASDDRIVGFEGLTDGLRAGKEDEFPTVNLARRLAKIGAIDVADDEAEPTHSAKKS-----SIQVAYHSGYDSDE 282
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: K3X9E1_GLOUD (Thioredoxin domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9E1_GLOUD) HSP 1 Score: 174 bits (442), Expect = 1.180e-45 Identity = 97/192 (50.52%), Postives = 129/192 (67.19%), Query Frame = 3
Query: 711 DVDSDDE-LLAGLDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHN-IIGFDGLTAGLPPDKL-----------DEWPLSNLARELALAKAIIYSQRD 1247
D DSDD+ LL+ LD DPE+ R+R++R+ ++K+ +E + E +AKGHG+YREI QDEFL EVTSS VVVHFYH DF+RCK+MDM LG LA H+E KFL+++AEKAPFFV+KL V++LPTV+CF DG+A + +IGFDGLTA ++ D +P LAR+L I + D
Sbjct: 103 DDDSDDDALLSELDHDPELERLRQARMNQLKQAYEQKQELLAKGHGEYREITQDEFLKEVTSSPLVVVHFYHNDFERCKIMDMHLGRLAKTHIECKFLKLNAEKAPFFVEKLM---------VRVLPTVVCFKDGIAFPSRVIGFDGLTADDEEEQSTFGSRGHLTSSDTFPTIALARKLVDIGVINHHDAD 285
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Match: A0A1V9ZHU8_9STRA (Thioredoxin n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZHU8_9STRA) HSP 1 Score: 173 bits (438), Expect = 3.310e-45 Identity = 95/192 (49.48%), Postives = 126/192 (65.62%), Query Frame = 3
Query: 657 LNGEVDSEDEEXXXXXXXDVDSDDELLAGLDADPEICRIRESRLREMKRVHEARAENIAKGHGQYREIVQDEFLPEVTSSEKVVVHFYHKDFQRCKVMDMRLGELAPRHLETKFLRIDAEKAPFFVQKLQARGSFSKFEVKILPTVICFIDGVAVHN-IIGFDGLTAGLPPDKLDEWPLSNLARELALAKAI 1229
+N V E E + + DD+ + D E R+RE RL++++ + + EN+AKGHG YREI QDEFL EVTSS +VVVHFYH+DF+RCKV+DM L ++A RH+E KFL++DAEKAPFFV KL V++LPT+I F +G+A + IIGF+ LT G+ K DE+P NLAR LA AI
Sbjct: 67 INETVKPEHYENEQLQKKNEEDDDDFEXXXEEDAEFLRLRELRLKQLQEQYRVKQENLAKGHGDYREITQDEFLKEVTSSVRVVVHFYHRDFERCKVIDMHLSKIAKRHIECKFLKLDAEKAPFFVNKLV---------VRVLPTIIYFKEGIASDDRIIGFEELTQGVGVGKEDEFPTVNLARRLAKIGAI 249 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17494.1 >prot_E-siliculosus-1a_M_contig95.17494.1 ID=prot_E-siliculosus-1a_M_contig95.17494.1|Name=mRNA_E-siliculosus-1a_M_contig95.17494.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=340bp MHASRDPPELILPHSGLTPTSPPCFHQPTQPPTRPSPPSTIFFCNTQRERback to top mRNA from alignment at E-siliculosus-1a_M_contig95:257046..263468+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17494.1 ID=mRNA_E-siliculosus-1a_M_contig95.17494.1|Name=mRNA_E-siliculosus-1a_M_contig95.17494.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6423bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:257046..263468+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:257046..263468+ >mRNA_E-siliculosus-1a_M_contig95.17494.1 ID=mRNA_E-siliculosus-1a_M_contig95.17494.1|Name=mRNA_E-siliculosus-1a_M_contig95.17494.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2040bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:257046..263468+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |