mRNA_E-siliculosus-1a_M_contig95.17488.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig95.17488.1 vs. uniprot
Match: A0A6H5KEL6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEL6_9PHAE) HSP 1 Score: 1179 bits (3050), Expect = 0.000e+0 Identity = 652/723 (90.18%), Postives = 667/723 (92.25%), Query Frame = 1
Query: 109 MVKKDRAKKAALQVNPQVLEFIDAAAIGDTKTVKKIAKAGKIEVDDDADGVTALMRACGNGHLKTVEELLLHGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYFMEEVGLDDLAVNKGAGRSGRKTALDYALDAGFNLDEGAKDRKALVLAYLHEKGAKHGEGVTDPETVFNGAARGDVNYVHYCLEANGSIIKSSHGAEGSSLLHVACNTGNIDLTQSLISHGADLEARNAVEGTPLISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRDCPAAAPGSDDGAIVGAILEGEPCMLCYRATAPEHQPPARILSPHELLVMKNKAGHTPVIKAFAGGVHVAVIRYVVGVQDGNVDPIKCGVAGADLPSLLSRQLATDGIALNPXXXXXXXXXXXXXXKEKSGGLFTCGEDNADEDVEPVDSPRELEQETKNQDNFFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVFVLTKPAVLAQSYMPTFKEAQEHHLLEPMSSLPPAAKVLYVSHRWAGIGEPDTQDAHAFMQVQRYLKEHSGDNIQYIWIDVSCMDVGNRDNVRYEQYMSNVVTVLARSTHMLAVPPCKTLDPRALVRDMTVARLVDKQTAEGKSPEYLKMLPTTTSKALGSGFASAAPSLANGXXXXXXXXXXXXXGGRKTKGDEAVTKAIEEEVDAAILSRQLSHPDKWSSLVVDS 2277
M KKDRAK AALQV+PQVLEFIDAAAIGDT TVKKIAKAGKIEVDDDADGVTALMRACGNGHLKTVEELLLHGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYF+EEVGLDDLA+NK AGRSGRKTALDYALDAG NLDEGAKDRKALVLAYLHE GA+HGEGVTDPETVFNGAA GDVNYVHYCLEANGSIIKSSHGAE SSLLHVACNTGNIDLTQ+LISHGADLEARNAVE TPLI+A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX L+RDCPAAAPGSDDGAIVGAILEG+ APEHQPPARILSPHELLVMKNKAGHTPVIKAFAGGVHVAVIRYVVGVQDGNVDPIKCGV GADLPSLLSRQLATDGIALNP KEKSGGLFTCGEDNAD DVEPV+SPRELEQETK+QD+FFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVFVLTKPAVLAQSYMPTFKEAQE HLLEPMSSL PAAKVLYVSHRWAGIGEPDTQDAHA +QVQRYLKEHSGDNIQYIWIDVSCMDVGNRDNVRYEQYMSNVVTVLARSTHMLAVPPCKTLDPRALVRDMTVARLV+KQTAEGKSPEYLKMLPTTTS A+GSGFASAAP LANG GGRKTKG+EAV KAIEEEVDAAILSRQLSHPDKWSSLVVDS
Sbjct: 1 MGKKDRAKNAALQVSPQVLEFIDAAAIGDTNTVKKIAKAGKIEVDDDADGVTALMRACGNGHLKTVEELLLHGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYFVEEVGLDDLAINKAAGRSGRKTALDYALDAGINLDEGAKDRKALVLAYLHENGAEHGEGVTDPETVFNGAAHGDVNYVHYCLEANGSIIKSSHGAERSSLLHVACNTGNIDLTQNLISHGADLEARNAVERTPLITAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLARDCPAAAPGSDDGAIVGAILEGD---------APEHQPPARILSPHELLVMKNKAGHTPVIKAFAGGVHVAVIRYVVGVQDGNVDPIKCGVLGADLPSLLSRQLATDGIALNPPPTPPPGEEGEET-KEKSGGLFTCGEDNAD-DVEPVNSPRELEQETKDQDHFFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVFVLTKPAVLAQSYMPTFKEAQERHLLEPMSSLHPAAKVLYVSHRWAGIGEPDTQDAHALLQVQRYLKEHSGDNIQYIWIDVSCMDVGNRDNVRYEQYMSNVVTVLARSTHMLAVPPCKTLDPRALVRDMTVARLVEKQTAEGKSPEYLKMLPTTTSNAVGSGFASAAPFLANGGGGPAPSTTIGSGGGRKTKGNEAVAKAIEEEVDAAILSRQLSHPDKWSSLVVDS 712
BLAST of mRNA_E-siliculosus-1a_M_contig95.17488.1 vs. uniprot
Match: D7G1T1_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1T1_ECTSI) HSP 1 Score: 1153 bits (2982), Expect = 0.000e+0 Identity = 655/727 (90.10%), Postives = 668/727 (91.88%), Query Frame = 1
Query: 109 MVKKDRAKKAALQVNPQVLEFIDAAAIGDTKTVKKIAKAGKIEVDDDADGVTALMRACGNGHLKTVEELLLHGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYFMEEVGLDDLAVNKGAGRSGRKTALDYALDAGFNLDEGAKDRKALVLAYLHEKGAKHGEGVTDPETVFNGAARGDVNYVHYCLEANGSIIKSSHGAEGSSLLHVACNTGNIDLTQSLISHGADLEARNAVEGTPLISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRDCPAAAPGSDDGAIVGAILEGEPCMLCYRATAPEHQPPARILSPHELLVMKNKAGHTPVIKAFAGGVHVAVIRYVVGVQDGNVDPIKCGVAGADLPSLLSRQLATDGIALNPXXXXXXXXXXXXXXKEKSGGLFTCGEDNADEDVEPVDSPRELEQETKNQDNFFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVFVLTKPAVLAQSYMPTFKEAQEHHLLEPMSSLPPAAKVLYVSHRWAGIGEPDTQDAHAFMQVQRYLKEHSGDNIQYIWIDVSCMDVGNRDNVRYEQYMSNVVTVLARSTHMLAVPPCKTLDPRALVRDMTVARLVDKQTAEGKSPEYLKMLPTTTSKALGSGFASAAPSLANGXXXXXXXXXXXXXGGRKTKGDEAVTKAIEEEVDAAILSRQLSHPDKWSSLVVDSSDGG 2289
M KKDRAKKAAL+VNP VLEFIDAA IGDTKTVKKIAKAGKIEVDDDADGVTALMRACGNGHLKTVEELL+HGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYF+EEVGLDDLAVNKGAGRSGRKTALDYALDAGFNLDE AKDRKALVLAYLHE GA+HGEGVTDPETVF+GAARGDVNYVHYCLEANGSIIK SHGAEGSSLLHVACNTGN DLTQSLISHGADLEARNAVEGTPLISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL+RDCPAAAPGSDDGAIVGAILEGE APEHQPPARILSPHELLVMKNKAGHTPVIKAFAGGVHVAVIRYVVGVQDGNVDP+KCGV GADLPSLLSRQLATDGIALNPXXXXXXXXXXXXX KEKSGGLFTCGEDNADEDVEPVDSPRELEQETKNQ+NFFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVF+LTKPAVLAQSYMPTFKEAQEHHLLEPMSSLPPAAKVLYVSHRW GIGEPDTQDAHAFMQVQRYLKEHSGDNIQYIWIDVSCMDVGNRDNVRYEQYMSNVVTVLARSTHMLAVPPCKTLDPRALVRDMTVARLV+KQTAEGKSP+YL GRKTKGDEAV+KAIEEEVDAAILSRQLSHP+KWSSL VDSSDGG
Sbjct: 1 MGKKDRAKKAALEVNPLVLEFIDAATIGDTKTVKKIAKAGKIEVDDDADGVTALMRACGNGHLKTVEELLVHGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYFIEEVGLDDLAVNKGAGRSGRKTALDYALDAGFNLDEEAKDRKALVLAYLHENGAEHGEGVTDPETVFDGAARGDVNYVHYCLEANGSIIKLSHGAEGSSLLHVACNTGNTDLTQSLISHGADLEARNAVEGTPLISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLARDCPAAAPGSDDGAIVGAILEGE---------APEHQPPARILSPHELLVMKNKAGHTPVIKAFAGGVHVAVIRYVVGVQDGNVDPVKCGVPGADLPSLLSRQLATDGIALNPXXXXXXXXXXXXX-KEKSGGLFTCGEDNADEDVEPVDSPRELEQETKNQENFFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVFLLTKPAVLAQSYMPTFKEAQEHHLLEPMSSLPPAAKVLYVSHRWTGIGEPDTQDAHAFMQVQRYLKEHSGDNIQYIWIDVSCMDVGNRDNVRYEQYMSNVVTVLARSTHMLAVPPCKTLDPRALVRDMTVARLVEKQTAEGKSPDYLGXXX-----------------------------------GRKTKGDEAVSKAIEEEVDAAILSRQLSHPEKWSSLAVDSSDGG 682
BLAST of mRNA_E-siliculosus-1a_M_contig95.17488.1 vs. uniprot
Match: A0A836CGH2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGH2_9STRA) HSP 1 Score: 147 bits (371), Expect = 1.040e-32 Identity = 191/639 (29.89%), Postives = 274/639 (42.88%), Query Frame = 1
Query: 199 KTVKKIAKAGKIEVDDDADGVTALMRACGNGHLKTVEELLLHGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYFMEEVGLDDLAVNKGAGRSGRKTALDYALDAGFNLDEGAKDRKALVLAYLHEKGAKHGEGVTDPETVFNGAARGDVNYVHYCLEANGSIIKSSHGAEGSSLLHVACNTGNIDLTQSLISHGADLEARNAVEGTPLISAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRDCPAAAPGSDDGAIV------GAILEGEPCMLCYRATAPEHQPPARILSPHELLVMKNKAGHTPVIKAFAGGVHVAVIRYVVGVQDGNVDPIKCGVAGADLPSLLSRQLATDGIALNPXXXXXXXXXXXXXXKEKSGGLFTCGEDNADEDVEPVDSPRELEQETKNQDNFFASNGVPYPVFVPPGPSSQGHRRMARFVDTMKNAVWGFDPEQVFVLTKPAVLAQSYMPTFKEAQEHHLLEPMSSLPPAAKVLYVSHRWAGIGEPDTQDAHAFMQVQRYLK-------------EHSGDN------------IQYIWIDVSC---------MDVGNRDNVRYEQYMS------------------NVVTVLARSTHMLAVP 1941
+TVKK+A +D D +GVT LM+AC GH V L+ GA GP+ DP F WAA HG+L+I+R+F+EE G D + GR RKTALDY L + DPE + +A +I+ + G E +LLHVA + DL + L+++G +AR+A T L XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX G L +L A+ E + + ++ +L M + +G T V AF GG H+ VIRY V D + A +R + A P G + + D+D P++ + N + + V S+ R+ARF+ +K VWG+D +VFV+T+ A+L+ +P+F +A L P++++ A VLYVSH+WA +PD A F+QV+++L+ +G I Y+W+D +C +D + + + S N +T L R+TH LA+P
Sbjct: 2 RTVKKLAADKSFGIDTDVNGVTGLMKACAYGHKAIVLHLVAAGAVNGWTGPSEDPHNAFCWAAEHGQLEIVRWFVEESGGDFEVMCTNQGRHKRKTALDYVLQS------------------------------IDPEEQPHASAE--------------NIVALTAGKERHTLLHVAATGNHGDLAKVLLANGIKRDARSAEGLTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAQWHASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGHLSTCRVLLSRAASKVEVEMASTAMA--TVLKMPDASGDTAVTLAFKGGPHIPVIRYFEEVLDSTPAEAQGSALAAXXXXXXARNVPALRHASMPSL----------------GNVAMFDTADNDDDEMPLERLISESETAPNAPHIRTLSEGEESVTDEVDLWSEQPPRVARFLRALKPTVWGYDLARVFVITRGALLSHGKLPSFAQAHAKGALVPLTAVLGEANVLYVSHKWASADDPDP-GAETFVQVKKFLETKCRPTPPPEPPLSETGSRTGPMEPEEPLPIIDYVWVDCACVPAPTDADALDAKVKQAASLDAHASRAASDYLPRIADAEAARANTITALLRATHFLAIP 577
BLAST of mRNA_E-siliculosus-1a_M_contig95.17488.1 vs. uniprot
Match: A0A0G4HK84_9ALVE (DAC domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HK84_9ALVE) HSP 1 Score: 67.8 bits (164), Expect = 7.970e-8 Identity = 64/239 (26.78%), Postives = 110/239 (46.03%), Query Frame = 1
Query: 94 SALPIMVKKDRAKKAALQV-NPQVLE----FIDAAAIGDTKTVKKIAKAGKIEVDDDA--DGVTALMRACGNGHLKTVEELLLHGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYFMEEVGLDDLAVNKGAGRSGRKTALDYALDAGFNLDEGAKDRKALVLAYLHEKGAKHGEGVTDPETVFNGAARGDVNYVHYCLEANGSIIKSSHGAEGSSLLHVACNTGNIDLTQSLISHGADL 789
S + ++++K ++V +PQV + +A+ GD + V + G +D+ A DG T L A G L+ V+ LL HGA M + + K+PF A HG+++I+R+F+E G+ D + KT L A + G K+ ++L Y A D +T A+ V V L+ ++ S+G+E S L+ A ++ +SL+ +G D+
Sbjct: 905 SVVELLLQKGAKDCLNMEVLHPQVFKCGTALFEASQRGDQEIVALLLSYGVDTIDESATDDGETPLYAAAG-ASLEVVQLLLNHGATM-PPNESREQKSPFFNAVRHGKVEIVRFFLERAGIVDTNLKNRHHPDYGKTFLHVASERGH------KEVVEILLRYNATADALSHPLGGDGQTALYYASGATVEVVQLLLKEGATL--PSNGSEQKSPLNRAVENHQFEIVKSLLENGVDV 1133
BLAST of mRNA_E-siliculosus-1a_M_contig95.17488.1 vs. uniprot
Match: A0A370CFJ6_9COXI (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Aquirickettsiella gammari TaxID=2016198 RepID=A0A370CFJ6_9COXI) HSP 1 Score: 58.5 bits (140), Expect = 4.990e-5 Identity = 47/197 (23.86%), Postives = 81/197 (41.12%), Query Frame = 1
Query: 247 DADGVTALMRACGNGHLKTVEELLLHGAGMWCAGPTSDPKTPFMWAAHHGRLDIIRYFMEEVGLDDLAVNKGAGRSGRKTALDYALDAGFNLDEGAKDRKALVLAYLHEKGA--KHGEGVTDPETVFNGAARGDVNYVHYCLEANGSIIKSSHGAEGSSLLHVACNTGNIDLTQSLISHGADLEARNAVEGTPLISA 831
D++G T L NGH L+ GA + D A H L +++Y + E GLD N+ +G+ L A + ++ YL +GA + + D T+ G ++ V Y + G + + + G LH+A ++G +D+ + L+ GADL + + +PL A
Sbjct: 115 DSNGWTPLHSVAANGHXXXXXXLIHQGADLSATDNIGDSTLDKAIKASH--LHVVKYLINEQGLDVNTPNRLSGQ--------------IPLHLAATSGRLEIIKYLISQGADLSAADNIGD-STMDKTIKAGHLHVVKYLINEQGLDVNTPNRLSGQIPLHLAADSGRLDIIRYLLDQGADLSTTDTISESPLDKA 294 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig95.17488.1 >prot_E-siliculosus-1a_M_contig95.17488.1 ID=prot_E-siliculosus-1a_M_contig95.17488.1|Name=mRNA_E-siliculosus-1a_M_contig95.17488.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=784bp AQQRATPAAAEPRKEKEEGRAERERERKERGSALPIMVKKDRAKKAALQVback to top mRNA from alignment at E-siliculosus-1a_M_contig95:204272..217306+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig95.17488.1 ID=mRNA_E-siliculosus-1a_M_contig95.17488.1|Name=mRNA_E-siliculosus-1a_M_contig95.17488.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=13035bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:204272..217306+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig95:204272..217306+ >mRNA_E-siliculosus-1a_M_contig95.17488.1 ID=mRNA_E-siliculosus-1a_M_contig95.17488.1|Name=mRNA_E-siliculosus-1a_M_contig95.17488.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4704bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig95:204272..217306+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |