prot_E-siliculosus-1a_M_contig95.17473.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17473.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17473.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length461
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17473.1 vs. uniprot
Match: D7G139_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G139_ECTSI)

HSP 1 Score: 523 bits (1346), Expect = 3.110e-182
Identity = 374/392 (95.41%), Postives = 374/392 (95.41%), Query Frame = 0 
Query:    1 MNGRGPMPCRFGVDCHRKDCWYAHPAGRSIDAGGXXXXXXXXXXYGAMPNGSNGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNECRYGFQCKREDCHFSHPFGRAIDGDGXXXXXXXXXXXXXRRPALNRGTSNNSVGSVTRGMSELSFGSYPPANATDDEQDLRDTWFPKARDCTCCKGFVYGCTADICDSMGQCTCSIEEADLDGSSDVASNISRTDSPHLGMVSNGSPMGPGEGWTQPPQPPTEXXXXXXXXXXXXXXXXXXX-RPSAGRGAGGGPECRYGTGCKRANCSFGHPRGRKMDSDGVTFGDFGGXXXXXXXXXXXXXXXXXXXXXRGAGARSTAQQDLMDTWYPDCRECSCCKGF 391
            MNGRGPMPCRFGVDCHRKDCWYAHPAGRSIDAGGXXXXXXXXXXYGAMPNGSNGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  NECRYGFQCKREDCHFSHPFGRAIDGDGXXXXXXXXX    RRPALNRGTSNNS  SVTRGMSELSFGSYPPANATDDEQDLRDTWFPKARDCTCCKGFVYGCTADICDSMGQCTCSIEEADLDGSSDVASNISRTDSPHLGM SNGSPMGPGEGWTQPPQPPT XXXXXXXXXXXXXXXXXXX RPSAGRGAGGGPECRYGTGCKRANCSFGHPRGRKMDSDGVTFGDFGGXXXXXXXXXXXXXXXX     RGAGARSTAQQDLMDTWYPDCRECSCCK  
Sbjct:    1 MNGRGPMPCRFGVDCHRKDCWYAHPAGRSIDAGGXXXXXXXXXXYGAMPNGSNGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--NECRYGFQCKREDCHFSHPFGRAIDGDGXXXXXXXXX----RRPALNRGTSNNSAVSVTRGMSELSFGSYPPANATDDEQDLRDTWFPKARDCTCCKGFVYGCTADICDSMGQCTCSIEEADLDGSSDVASNISRTDSPHLGMASNGSPMGPGEGWTQPPQPPTXXXXXXXXXXXXXXXXXXXXXRPSAGRGAGGGPECRYGTGCKRANCSFGHPRGRKMDSDGVTFGDFGGXXXXXXXXXXXXXXXX-----RGAGARSTAQQDLMDTWYPDCRECSCCKSL 381
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17473.1 vs. uniprot
Match: A0A836CHD1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD1_9STRA)

HSP 1 Score: 109 bits (272), Expect = 7.540e-24
Identity = 78/240 (32.50%), Postives = 103/240 (42.92%), Query Frame = 0 
Query:    4 RGPMPCRFGVDCHRKDCWYAHPAGRSID--AGGXXXXXXXXXXYGA--------MPNGSNGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNECRYGFQCKREDCHFSHPFGRAIDGDGXXXXXXXXXXXXXRRPALNRGTSNNSVGSVTRGMSELSFGSYPPANATDDEQDLRDTWFPKARDCTCCKGFVYGCTADICDSMGQCTCSIEEADLD 233
            +G   CRF   C R+DC++AHP GR ID  +GG           G         M NG+ G                                                         CR+ + C+R DC+F+HP GRAID  G  XXXXXXXXXXX                                 A + +Q+L DTWFP++RDCTCC+GFVYGC  DIC ++G+CTC++EE+D++
Sbjct:    2 QGRQVCRFDTACSRQDCYFAHPNGRMIDGSSGGNGMVMVMPMHAGGGGMGAPGGMANGTGGGGSQ---------------------------------------------------KPCRFAWDCRRPDCYFAHPTGRAIDAAGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XXXMAAAEQDQELADTWFPRSRDCTCCRGFVYGCAGDICAALGKCTCAVEESDME 186
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig95.17473.1 vs. uniprot
Match: A0A7S0MWD6_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0MWD6_9CHLO)

HSP 1 Score: 97.4 bits (241), Expect = 2.820e-18
Identity = 64/223 (28.70%), Postives = 80/223 (35.87%), Query Frame = 0 
Query:    4 RGPMPCRFGVDCHRKDCWYAHPAGRSIDAGGXXXXXXXXXXYGAMPNGSNGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNECRYGFQCKREDCHFSHPFGRAIDGDGXXXXXXXXXXXXXRRPALNRGTSNNSVGSVTRGMSELSFGSYPPANATDDEQDLRDTWFPKARDCTCCKGFVYGCTADICDSMGQCTCS 226
            RGP PCRFG  C R DC+++HP GR+I   G            AMP G                                                            CR+G  C R+DC+F+HP GR IDG                R A            + + MS L              Q  ++TW+  AR+CTCCKGFVYGCT   C +  +CTCS
Sbjct:   19 RGPTPCRFGYSCRRPDCYFSHPEGRAIGVAGAPGAPVIPP---AMPGG---------------------------------FVPRGPPVPAYHPPAPAPGGGAGNKRACRFGQGCTRQDCYFAHPEGRTIDGSAKPGGGGG-------RSAPQYRPMQPHYQPIQQAMSAL--------------QIKKETWYANARNCTCCKGFVYGCTTPACAAQEECTCS 184
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G139_ECTSI3.110e-18295.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CHD1_9STRA7.540e-2432.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0MWD6_9CHLO2.820e-1828.70Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14608zf-CCCH_2coord: 307..323
e-value: 9.5E-4
score: 19.6
coord: 8..25
e-value: 0.04
score: 14.4
coord: 112..128
e-value: 5.3E-4
score: 20.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:61202..68309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17473.1mRNA_E-siliculosus-1a_M_contig95.17473.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 60280..68309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17473.1 ID=prot_E-siliculosus-1a_M_contig95.17473.1|Name=mRNA_E-siliculosus-1a_M_contig95.17473.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=461bp
MNGRGPMPCRFGVDCHRKDCWYAHPAGRSIDAGGGGGAGAGSSSYGAMPN
GSNGASGPPGGTVGGGGGGGGGARPGMVPGGMMPHASPRQAGGGGRGGRG
GGGGGGGGNNECRYGFQCKREDCHFSHPFGRAIDGDGGGGGGGGGGGGGG
RRPALNRGTSNNSVGSVTRGMSELSFGSYPPANATDDEQDLRDTWFPKAR
DCTCCKGFVYGCTADICDSMGQCTCSIEEADLDGSSDVASNISRTDSPHL
GMVSNGSPMGPGEGWTQPPQPPTEAALAAAAAAPPAPAGGGGGRPSAGRG
AGGGPECRYGTGCKRANCSFGHPRGRKMDSDGVTFGDFGGGGSSGGGGGG
GGGGGGGGGGGRGAGARSTAQQDLMDTWYPDCRECSCCKGFKHGCKTPAC
ESAGLCACSSGGGPVVPISSVAGPPSAGGGGSAAKEAAAADATRTGAGGE
ATPPSPQTTA*
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