prot_E-siliculosus-1a_M_contig95.17470.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17470.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17470.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length101
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig95.17470.1 vs. uniprot
Match: D7G8M0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M0_ECTSI)

HSP 1 Score: 167 bits (424), Expect = 1.100e-47
Identity = 86/100 (86.00%), Postives = 89/100 (89.00%), Query Frame = 0 
Query:    1 MVARASAPSWELSSSEKVVAAAATTAVTHLDHPSETGRGSRTAPRPPTARDVSTLPENPKRTVAGMPLEKWAVRGRQGSGAEVRAGPGLCLVLTWKSCLP 100
            M ARASAPSWELSSSEK + AAATTAVTHLDHPSETGRGSRT PRP TARDVSTLPE+ KR VAGMPLEK A RGRQGSG  +RAGPGLCLVLTWKSCLP
Sbjct:  406 MAARASAPSWELSSSEKAMEAAATTAVTHLDHPSETGRGSRTTPRPQTARDVSTLPEHQKRKVAGMPLEKRAARGRQGSGTGIRAGPGLCLVLTWKSCLP 505
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17470.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8M0_ECTSI1.100e-4786.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:43834..44136 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17470.1mRNA_E-siliculosus-1a_M_contig95.17470.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 42791..44345 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17470.1 ID=prot_E-siliculosus-1a_M_contig95.17470.1|Name=mRNA_E-siliculosus-1a_M_contig95.17470.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=101bp
MVARASAPSWELSSSEKVVAAAATTAVTHLDHPSETGRGSRTAPRPPTAR
DVSTLPENPKRTVAGMPLEKWAVRGRQGSGAEVRAGPGLCLVLTWKSCLP
*
back to top