prot_E-siliculosus-1a_M_contig95.17491.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig95.17491.1
Unique Nameprot_E-siliculosus-1a_M_contig95.17491.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length114
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig95.17491.1 vs. uniprot
Match: A0A6H5KL80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL80_9PHAE)

HSP 1 Score: 126 bits (316), Expect = 1.980e-32
Identity = 92/102 (90.20%), Postives = 94/102 (92.16%), Query Frame = 0 
Query:   16 AVALVAALLPFDRARVQAAAPGASPEGRQGAGAAKRHKGSRKRXXXXXXXXXXXX---RPEDARFNGTRHDNGTDAGAAAAGAEDTDGTAEVDVAVVRSDRT 114
            AVALVAALLPFDRARVQA APGASP+GRQGAGAAKRHKGSRKRXXXXXXXXXXXX   RPE ARFNGTR+DN TDAGAA  GAEDTDGTAEVDVAVVRSDRT
Sbjct:   22 AVALVAALLPFDRARVQATAPGASPKGRQGAGAAKRHKGSRKRXXXXXXXXXXXXXXXRPERARFNGTRYDNDTDAGAA--GAEDTDGTAEVDVAVVRSDRT 121
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig95.17491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KL80_9PHAE1.980e-3290.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..114
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..33
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..33
score: 0.569

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig95contigE-siliculosus-1a_M_contig95:232371..236365 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig95.17491.1mRNA_E-siliculosus-1a_M_contig95.17491.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig95 232249..236365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig95.17491.1 ID=prot_E-siliculosus-1a_M_contig95.17491.1|Name=mRNA_E-siliculosus-1a_M_contig95.17491.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=114bp
MPTTAGSRRCRSAAAAVALVAALLPFDRARVQAAAPGASPEGRQGAGAAK
RHKGSRKRSGGGGGGGGGGGRPEDARFNGTRHDNGTDAGAAAAGAEDTDG
TAEVDVAVVRSDRT
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