mRNA_E-siliculosus-1a_M_contig94.17452.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_M_contig94.17452.1
Unique Name	mRNA_E-siliculosus-1a_M_contig94.17452.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: D7FU31_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU31_ECTSI)

HSP 1 Score: 414 bits (1065), Expect = 1.230e-142
Identity = 207/209 (99.04%), Postives = 207/209 (99.04%), Query Frame = 3

Query:   33 MVQYSKEIEGTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPKKPTRKQVAKTRFVKAGGGVEV 659
            MVQYSKEIEGTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDY GDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVD LYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPKKPTRKQVAKTRFVKAGGGVEV
Sbjct:    1 MVQYSKEIEGTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYMGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDSLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPKKPTRKQVAKTRFVKAGGGVEV 209

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: A0A6V1UCU8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1UCU8_HETAK)

HSP 1 Score: 241 bits (614), Expect = 1.020e-74
Identity = 129/211 (61.14%), Postives = 155/211 (73.46%), Query Frame = 3

Query:   33 MVQYSKEIEGTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPK----KPTRKQVAKTRFVKAGGGV 653
            MV YS + E  KS+KA+GS+LRVHFKHMREVAH IKGMKL+KAK +L+DVL++K+AV FT FTGG+G HAQGKL  A                       PG+KCRWPQKAT+IVLDL+KNAE+NAE K LD++ L + H+Q NRAPKQRRRTYRAHGRINPYMSSPAHIEL+L+E+   V KG+E +    K +RKQ A+ R V  GGGV
Sbjct:    1 MVNYSIKDEPEKSSKAKGSHLRVHFKHMREVAHNIKGMKLAKAKAFLEDVLQFKQAVTFTKFTGGIGHHAQGKLRKA-----------------------PGNKCRWPQKATKIVLDLLKNAEANAEVKGLDIESLVVTHIQTNRAPKQRRRTYRAHGRINPYMSSPAHIELLLAEEGSNVAKGEEEEGKQLKLSRKQAARRR-VTVGGGV 187

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: W7TUF4_9STRA (60s ribosomal protein l17-2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUF4_9STRA)

HSP 1 Score: 239 bits (610), Expect = 3.230e-74
Identity = 127/207 (61.35%), Postives = 149/207 (71.98%), Query Frame = 3

Query:   33 MVQYSKEIEG-TKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPKKPTRKQVAKTRFVKAGGG 650
            MV+YS+EI+   K+AKARGS+LRVHFKH+REV+H I G ++ KAK +L+DVL+YKRAVPFT F GG+GRHAQGKL                          PGS+C WPQKAT+IVLD++ NAESNAE K +D D LYIVH Q NRAPKQRRRTYRAHGRINPYMSSPAH+E+IL+EK V VKK     K TRKQ A+ R    GGG
Sbjct:    1 MVRYSREIDDPNKAAKARGSHLRVHFKHVREVSHTITGWQVGKAKQFLEDVLQYKRAVPFTRFKGGIGRHAQGKL-----------------------LSVPGSQCAWPQKATKIVLDMLTNAESNAEVKGMDTDNLYIVHAQTNRAPKQRRRTYRAHGRINPYMSSPAHLEIILTEKPVPVKKEPGAPKLTRKQAARVRV---GGG 181

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: A0A5D6XKD7_9STRA (Uncharacterized protein n=25 Tax=Oomycota TaxID=4762 RepID=A0A5D6XKD7_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.590e-69
Identity = 126/210 (60.00%), Postives = 148/210 (70.48%), Query Frame = 3

Query:   33 MVQYSKEIEGT-KSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPK--KPTRKQVAKTRFVKAGGGV 653
            M  YS+E E   ++AKARGS+LRVHFKH REV+H IKGM LSKAK +L  VL+YK+AVPFT FTGG GRHAQGKL  A                       PG KC+WPQKAT+I+LDLVKNAE+NAE K LD D LY+ H Q N A KQRRRTYRAHGRI PYM++PAHIELIL+EK   V+K D+ K  K +RK+ A+ R  K+GGGV
Sbjct:    1 MPSYSQEPEDAQRAAKARGSHLRVHFKHCREVSHAIKGMPLSKAKSFLSAVLDYKQAVPFTKFTGGCGRHAQGKLRNA-----------------------PGDKCKWPQKATKIILDLVKNAEANAEVKGLDTDKLYVSHAQANAAIKQRRRTYRAHGRIGPYMANPAHIELILTEKRDNVQKSDDKKEVKVSRKRQAQLRL-KSGGGV 186

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: A0A485L8A8_9STRA (Aste57867_17649 protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A485L8A8_9STRA)

HSP 1 Score: 226 bits (577), Expect = 3.650e-69
Identity = 127/210 (60.48%), Postives = 146/210 (69.52%), Query Frame = 3

Query:   33 MVQYSKEIEG-TKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPK--KPTRKQVAKTRFVKAGGGV 653
            M  YS+E E  T+SAKARG +LRVH+KH REV H IKG  L+KAK +L DVLE K AVPFT +TGG GRHAQGKL                         +PG KCRWPQKATRI+LDLVKNAE+NAE K LDV+ LYI H Q N A KQRRRTYRAHGRI PYM++PAHIELIL+EK+  V K +EPK  K +RK+ A  R  K+GGGV
Sbjct:    1 MPSYSQEPEDQTRSAKARGRHLRVHYKHCREVCHTIKGYSLAKAKKFLGDVLEMKAAVPFTKYTGGPGRHAQGKL-----------------------LNAPGDKCRWPQKATRIILDLVKNAEANAELKGLDVEKLYIAHTQANMAIKQRRRTYRAHGRIGPYMANPAHIELILTEKKENVAKAEEPKAAKVSRKRQAVLRL-KSGGGV 186

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: A0A7S1TQM1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQM1_9STRA)

HSP 1 Score: 225 bits (573), Expect = 1.410e-68
Identity = 124/211 (58.77%), Postives = 147/211 (69.67%), Query Frame = 3

Query:   33 MVQYSKEIE-GTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDE--PKKPTRKQVAKTRFVKAGGGVE 656
            MV+YS + +   KSAKARGS+LRVHFKH REV   I+GMKLSKAK +L+DVLEYK+ VPFT FTGGVGRHAQ K                          +PGSK RWPQKA++IVLDL+ NAE+NAE K LD D LY+ H QCNRAP  RRRTYRAHGRIN YMS PAH+E+IL+E++  V + DE  P K +RK+ A+ R  K GGGVE
Sbjct:    1 MVKYSFDADLPVKSAKARGSHLRVHFKHCREVTTTIRGMKLSKAKAFLEDVLEYKQIVPFTKFTGGVGRHAQAK-----------------------NMKAPGSKGRWPQKASKIVLDLLTNAEANAEVKGLDTDALYVTHTQCNRAPPGRRRTYRAHGRINAYMSQPAHVEIILTEQDDAVARADEEKPLKLSRKRKAQLRL-KQGGGVE 187

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: A0A067CFI1_SAPPC (50S ribosomal protein L22 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CFI1_SAPPC)

HSP 1 Score: 224 bits (572), Expect = 1.980e-68
Identity = 125/210 (59.52%), Postives = 147/210 (70.00%), Query Frame = 3

Query:   33 MVQYSKEIEG-TKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDE--PKKPTRKQVAKTRFVKAGGGV 653
            M  YS+E E  ++SAK+RGS+LRVHFKH REV H IKG+ + KAK +L+ VLE K AVPFT FTGGVGRHAQGK                       T  +PG KCRWPQKAT+I+LDLVKNAE+NAE K LD D LYI H Q N A KQRRRTYRAHGRI PYMS+PAHIELIL+EK+  V K ++  P K +RK+ A+ R  K+GGGV
Sbjct:    1 MPSYSQEPEDQSRSAKSRGSHLRVHFKHCREVCHTIKGLPVGKAKKFLEAVLEKKAAVPFTKFTGGVGRHAQGK-----------------------TLNAPGDKCRWPQKATKIILDLVKNAEANAELKGLDTDKLYIAHTQANAAIKQRRRTYRAHGRIGPYMSNPAHIELILTEKKENVAKAEDAAPAKISRKRNAQLRL-KSGGGV 186

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: A0A7S2WRP5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WRP5_9STRA)

HSP 1 Score: 223 bits (569), Expect = 8.560e-68
Identity = 123/210 (58.57%), Postives = 150/210 (71.43%), Query Frame = 3

Query:   27 TTMVQYSKEI-EGTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKG-DEPKKPTRKQVAKTRFVKAGGG 650
            +TMV+YS ++ E T  +KA+ S+LRVHFKH RE+ H IKGM+L+KA  +L+DVL+YK+AVPFT FTGG+GRHAQ K                          +PGSK RWPQKAT++VLDLVKNAE+NAE+K LD D L++ H Q NRA KQRRRTYRAHGRINPYMSSPAHIELIL+  E  V K  D P+K TR++ A+ R VK GGG
Sbjct:   14 STMVKYSMDMDEATDYSKAKASSLRVHFKHTREIMHTIKGMQLAKALKFLEDVLQYKQAVPFTKFTGGIGRHAQLKQ-----------------------MKAPGSKGRWPQKATKVVLDLVKNAEANAETKGLDTDKLFVKHAQANRAQKQRRRTYRAHGRINPYMSSPAHIELILASIEDPVAKAEDAPQKLTRRRQAQLR-VKVGGG 199

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: A0A7S2FZJ5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZJ5_9STRA)

HSP 1 Score: 223 bits (568), Expect = 1.910e-67
Identity = 123/211 (58.29%), Postives = 148/211 (70.14%), Query Frame = 3

Query:   33 MVQYSKEI--EGTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPKKP---TRKQVAKTRFVKAGGG 650
            MV+YS +   +    +KARGS+LRVHFKH RE+ H IKGM LS+AK +L+DVL+ K+AVPFT FTGG+GRHAQ K                        F +PGSK RWPQKA++I+LDL+KNAE+NAE K LDVD L +VH QCNRA +QRRRTYRAHGRINPYMS PAHIEL+L   +  VKK DE KK    TRKQ A+ R +K+GGG
Sbjct:   28 MVKYSYDQLDDSVDCSKARGSHLRVHFKHCREITHTIKGMSLSRAKQFLEDVLQMKQAVPFTKFTGGIGRHAQLKQ-----------------------FKAPGSKGRWPQKASKIILDLLKNAEANAEFKGLDVDDLEVVHAQCNRAQQQRRRTYRAHGRINPYMSHPAHIELVLENPKNPVKKEDEDKKVPRLTRKQQAQLR-IKSGGG 214

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BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Match: A0A836C7U9_9STRA (Ribosomal protein L22/L17 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7U9_9STRA)

HSP 1 Score: 221 bits (564), Expect = 3.240e-67
Identity = 123/211 (58.29%), Postives = 144/211 (68.25%), Query Frame = 3

Query:   33 MVQYSKEIEG-TKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDVLEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVSPGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQRRRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPKKPTRKQVAKTRF--VKAGGGVE 656
            M +Y+KE E   K++KARG+ LR HFKH+REVAH I+G    +A  +L+DVL++KRAV FT FTGGVGRHAQGKL  A                       PG K RWPQKAT++VL LVKNAESNA +K LDVD L I H+  N AP+QRRRTYRAHGRIN YMS+P H ELIL+EK VQV K  E  K +RKQVA  RF  VK GGG+E
Sbjct:    1 MTRYAKEAENPAKASKARGAYLRCHFKHLREVAHNIRGKSCVEAVRFLEDVLKFKRAVTFTKFTGGVGRHAQGKLVNA-----------------------PGDKVRWPQKATKVVLGLVKNAESNAVTKGLDVDKLVITHIMANHAPQQRRRTYRAHGRINAYMSTPGHFELILAEKAVQVPKAAEAPKLSRKQVAAARFKSVKVGGGLE 188

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig94.17452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FU31_ECTSI	1.230e-142	99.04	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6V1UCU8_HETAK	1.020e-74	61.14	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
W7TUF4_9STRA	3.230e-74	61.35	60s ribosomal protein l17-2 n=2 Tax=Monodopsidacea...	[more]
A0A5D6XKD7_9STRA	2.590e-69	60.00	Uncharacterized protein n=25 Tax=Oomycota TaxID=47...	[more]
A0A485L8A8_9STRA	3.650e-69	60.48	Aste57867_17649 protein n=4 Tax=Aphanomyces TaxID=...	[more]
A0A7S1TQM1_9STRA	1.410e-68	58.77	Hypothetical protein n=2 Tax=Phaeomonas parva TaxI...	[more]
A0A067CFI1_SAPPC	1.980e-68	59.52	50S ribosomal protein L22 n=4 Tax=Saprolegniaceae ...	[more]
A0A7S2WRP5_9STRA	8.560e-68	58.57	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7S2FZJ5_9STRA	1.910e-67	58.29	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A836C7U9_9STRA	3.240e-67	58.29	Ribosomal protein L22/L17 n=1 Tax=Tribonema minus ...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig94	contig	E-siliculosus-1a_M_contig94:568391..574258 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	630
Model size	1316
Exons	8
Ec32 ortholog	Ec-27_001230.1
Ec32 ortholog description	Ribosomal protein L22/L17, eukaryotic/archaeal
Hectar predicted targeting category	other localisation
BRITE	br01610,ko00000,ko00001,ko00002,ko00537,ko01000,ko03011,ko04090,ko04516
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
COG Functional cat.	J
EC	1.1.1.26,1.14.11.8
EggNOG OGs	COG0091@1,KOG3353@2759
EggNOG free text desc.	structural constituent of ribosome
GOs	GO:0000184,GO:0000448,GO:0000460,GO:0000463,GO:0000466,GO:0000469,GO:0000470,GO:0000478,GO:0000479,GO:0000956,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0007154,GO:0007346,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010564,GO:0010605,GO:0010629,GO:0015031,GO:0015833,GO:0015934,GO:0016070,GO:0016071,GO:0016072,GO:0019222,GO:0019439,GO:0019538,GO:0019843,GO:0022613,GO:0022625,GO:0022626,GO:0030016,GO:0030017,GO:0030684,GO:0030687,GO:0031667,GO:0031668,GO:0031669,GO:0031672,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034198,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0042254,GO:0042273,GO:0042594,GO:0042886,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043292,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044449,GO:0044464,GO:0045047,GO:0045184,GO:0045787,GO:0045931,GO:0046483,GO:0046700,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0070180,GO:0070727,GO:0070972,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090068,GO:0090150,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099080,GO:0099081,GO:0099512,GO:1900087,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902806,GO:1902808,GO:1990904,GO:1990928,GO:2000045
KEGG Module	M00177
KEGG Pathway	ko00310,ko00630,ko01100,ko01110,ko01120,ko03010,ko04150,ko04650,map00310,map00630,map01100,map01110,map01120,map03010,map04150,map04650
KEGG Reaction	R00717,R01388,R03451
KEGG ko	ko:K00015,ko:K00474,ko:K02880,ko:K06479,ko:K08267
KEGG rclass	RC00031,RC00042,RC00773
Preferred name	RPL17
Seed eggNOG ortholog	2880.D7FU31
Seed ortholog evalue	1.8e-113
Seed ortholog score	415.2
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig94.17452.1	prot_E-siliculosus-1a_M_contig94.17452.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	polypeptide	E-siliculosus-1a_M_contig94 569045..574226 -

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622936505.8539088-UTR-E-siliculosus-1a_M_contig94:568390..569044	1622936505.8539088-UTR-E-siliculosus-1a_M_contig94:568390..569044	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig94 568391..569044 -
1696251108.7335026-UTR-E-siliculosus-1a_M_contig94:568390..569044	1696251108.7335026-UTR-E-siliculosus-1a_M_contig94:568390..569044	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig94 568391..569044 -
1622936506.0320854-UTR-E-siliculosus-1a_M_contig94:574226..574258	1622936506.0320854-UTR-E-siliculosus-1a_M_contig94:574226..574258	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig94 574227..574258 -
1696251108.8230233-UTR-E-siliculosus-1a_M_contig94:574226..574258	1696251108.8230233-UTR-E-siliculosus-1a_M_contig94:574226..574258	Ectocarpus siliculosus Ec864m_EcPH12_78m male	UTR	E-siliculosus-1a_M_contig94 574227..574258 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_M_contig94:568391..574258-
coding sequence from alignment at E-siliculosus-1a_M_contig94:568391..574258-

protein sequence of mRNA_E-siliculosus-1a_M_contig94.17452.1

>prot_E-siliculosus-1a_M_contig94.17452.1 ID=prot_E-siliculosus-1a_M_contig94.17452.1|Name=mRNA_E-siliculosus-1a_M_contig94.17452.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=210bp
MVQYSKEIEGTKSAKARGSNLRVHFKHMREVAHLIKGMKLSKAKVYLQDV
LEYKRAVPFTMFTGGVGRHAQGKLPIAKDYTGDPSSKTVPGNKHKHTFVS
PGSKCRWPQKATRIVLDLVKNAESNAESKALDVDGLYIVHVQCNRAPKQR
RRTYRAHGRINPYMSSPAHIELILSEKEVQVKKGDEPKKPTRKQVAKTRF
VKAGGGVEV*

mRNA from alignment at E-siliculosus-1a_M_contig94:568391..574258-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_M_contig94.17452.1 ID=mRNA_E-siliculosus-1a_M_contig94.17452.1|Name=mRNA_E-siliculosus-1a_M_contig94.17452.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5868bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:568391..574258- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CGCCACCGTCGTGGGACTTGAGCGGCACCACCATGGTTCAGTACAGGTGA
CCGATACACTCTCTTGCCTTTCTCTAAGAGCTTGCTCCCTTTGCAGTGCA
GGGTGTGATGGGGGCGATGCGATGTGTTGTGGCGAAGGGTAAGATGGAGA
GAGGCAAGGGCTAGAAATGCCCTACCCACAAGACAGGGTTTGTGTGTGTG
TCGCTGCTAGGCGTTGAGGGCGGCAACCACGAAGCCAACCACCAGCACAA
CAACTGCCGTTACCTGTGCATGTTATTCGATGGTAATCCAAGCCTTGATT
GTTGCACGATCCGTCAAACACACCCCTTGTTCTAGCAGCACGGCTAGCAG
CAGCAGCCCTGAAAACAAGGAGGGTGTTGTTGTGAAGGCGGCAACGCCTG
TAGCCGCCACACCACACGCGTTCCTTCTGCTGCTGTCCGTGCTTCCCTCA
CCTCATCCGGGGCGAGGAGGCCCCGGCATACAGCTGCTTTTCAAATCCAT
CTTTTTCTCTCAATCTTCGTCGTCTTCACACGCTCTCTCTCTTTCTCTCT
CCCTTACGCGGCCTGGGCGGCGGAATCGGTGGCGACAACTCGCTTGCGAT
GCAATGATTCGGCGGAGCGTAGCAAGGAGATCGAAGGCACCAAGTGTGAG
TTCCAAATGAATGCGGAAGTTCAAGCTGCGTAACCTGCTGCTGTGTTGTT
TTTCACGTCTTGGCGTGCGTAACTGTCTCTATCTGCACGGCGTGGTCAGG
ACATGCTCCATTTATTCATTGCTGCCTTTGGTTCGAACCCCTGTTGTACG
TACGTGACGTACCACGAAAGCTATACTTATAGGGTACGCAAAAGTACCTG
TGCTGTGTTTCGGCTGCCAGCTTCGGCTGTGGCGCGGCGGTGGTTGAAAG
TCGACAAAACCACCCGAACGGCGTGTGTATGGGAGGCCGAGAACCCCTGT
GTGTCACCAGCACATTCGCAGCCAGCGACCATTTTTGTGGGAACAGCGAA
TCTCTCACGGGAGAATTTACCTAGTTAAACCGTTACGTATGCATGCGGTT
TCGCTCTTTGTAGGTGGGAAATGGAGAGTCAACATGACTTAGTAGACCTT
GGGGGATGGGGCCGTGTGGCGATAACGAAGAGGATTAGTGGTATGCTTCA
TCTACGATGGCACAACAGGTTCAAGGATTGACTTGGAGAAAGGGGGGGGG
GGGGCATCTCTGTGCTCTCTTTCTCACGTGCTGGGCCGGGGTACATGTCT
CTTGGCGTATGAATACAAACTGTCTCGTTGCATGTTTTCGTCCACGTTGT
CCGTTACAGCTGTCTCAAAACTCGGCACAAATGGTAGGTAACGGGCGTGG
TACAGAGCAGTTGTAAGCGTCGTTTGATGCACAAGCTCGAGCGAGTTTCC
TTCACAGTTTCTTGTTCGCCACGTGCAGATGAAGCAGAAAGTAGCTCACT
TGGCGAAACGTGAAATATTAATATTGTCCCCCCTCGCTGCCCCCCCCCCC
AAAAAAAAAACTTGTGCTTGTTGGACCGAAGCACGAGATTTTCTGGTGAG
TGTATTGTCCACGCCCTCTTAACAACCTAGGAGAGTCCCGTTGATGCTTG
AAGCCACAAGTGAAACGTCGATCCATCCGCGAACTTCCAAGCAAATCACC
TTCTCTGCTGTCGCAGATAGTGACCCAAGAGGCTTTTCCTTGCTCCAGAA
ACAGAGGAAGAAGGGCATTCCTCGTCCCACACCGTCATCTTCAGGGACAG
CACCAAAAAACGATTTAGTTTTTTTCCTCTTGTACAATAGAAAACGGAAC
CTAAGGGGCTTGCTGCGTTGGAGGACCCCGCAACCACGTACGCTCATGTT
TGTCCCTCCCATGTCGGTGAAGTCAAGTATACTTCTAGCTTGTCCCTGTC
TTGTCCTCATGCTGTGCCTCTCTCTCTCTCTCGATTCGTCTGTCGGCGTG
TGTCTCTCGTCTGCCGGTCTGCAGCCGCAAAGGCCCGCGGGTCTAACCTG
CGGGTCCACTTCAAGCACATGCGCGAGGTGGCGCACCTGATCAAGGGCAT
GAAGCTGTCCAAGGCGAAGGTGTACCTGCAGGTGAGAATCGCGCAAGTGT
GCCGGTCGATTCAACTCACAGCAGCCGAACCGTGGATGCCTTGCACCCTC
ATCGTCTTCGTGGTCCTGTTTGTTGCACTGTTTGTGTGCCTGTTCCCCAT
TATCTTGAAGCAGTCGAACGTGGATGTCTTGTTGCACCCTCATCTGTGTT
GACCGTCTGCGTGTTCCCCATCTGTTGTTGCATTTGCAACACCCGACCTT
TTTTTGTGTTGAAGCTGGCACAACTGCTGTCCGGCGGGTGCTCCAGCTGG
TCTGCACTACCACTTTTTTAGGCGACATAACGTCGTTGTGGTCGTCGCAA
GAGATCAACCTGCAGGAGGCACTGACTCCAGGCTTCTTTCCCAGACAAAT
TTAGTTTTTTGTTGAGCCCTTCTGTTTCCACCCCTGAACCAAACAAAGGG
AGTTCCCCGTGTTCCTGTTTTTGATAATTCCTCCCATCTAGTTGCAGCTT
CCCGTCACCCCCCGGCCGCTCTTCCAACCGCGTAGTTCCTTGCTTCCGGT
TGCACGTTTTTGGCTGCTACGCTACGTTTTCACCGCCGGCTGACCGGTCT
GTTTCCGTCGCTTTTGCTCGCCCTCGTTTTTTTTAGGACGTACTCGAGTA
CAAGCGCGCGGTGCCCTTCACCATGTTCACCGGCGGCGTCGGCAGGCACG
CTCAGGGCAAGCTGCCTATCGCCAAGGACTACACGGGGGACCCGTCCAGC
AAGACGGTGAGCAAGAAACACGCCGGGAAGCGGGGGGGAGACGTGGGTAA
GGGGGGCTGCCAGCGAGAGTGGTGCGGTGCCTTTCTTATAGTATGTTGGG
GGTCCTGTCTTCATGTGATGTCACCGTGAGAGAAACCTAATGACCTATCT
CGCTCTACGGGTCCGTGACCCCAGATTTTTTCGTGTGGCTCTTCTTTGTC
GGTTAGGTTTTTAATTCCGTGGAAGCTTGCCTCGCAAACACTGGTCTGGC
GTGCCCATCTTGAACCCAACTTTGTGCACCGTTTATGAAGGTCTATTGTG
TCTTATCACGCGCACCCCAGATGATACTTGATCGAGGCGGGGTGAGTGTT
GGCAAGAAACAAAACGTCAATAGTTTCCGAAAGCGCGTGGCGTTTTGTTT
TCATGATCGCGAGAGACGCTAAGGTATCGATGTTCTCTGCGGAGAAACCG
GCCGTGGATGATCGTTGCGGCAGCAAGAAGAGGTGTCGTGTTTGGCATCG
TGGAATAACACATGGTGTAGGTTTTCGTCGAAAGCGTTCGTGAACAGCAG
ACAGTACTTCCTGATGTGTAACGAAGAGCAAGCACCGGAAGATTCTAACG
TTTATCAGGAAGTCGAAGTATGTGTCACTGGTGTACTCTGTCGGTGCTTA
AACATATGTTTGGTCCTCGCCCCGCCTCCCGTGTCTCGCTTTGTGTTTTC
TCAATCATGCCTCATCAACAAGCGATAGAACAAGTTTGCTAACCTGACAC
AATCTTGCTTTTGCCTGAAACACTGTAGGTGCCGGGAAACAAGCACAAGC
ACACCTTCGTGTCTCCAGGAAGCAAGTGCCGCTGGCCTCAGAAGGCGACC
CGCATCGTTCTCGACCTCGTCAAGAACGCCGAGTCTAACGCCGAGGTGAG
AAGAAACAGAGTGGATGAACAGAACGTGCTTCTTTTGTTTATAATTTGTT
TTGCTGTTGCATGGGGAAAATGCAATGAGGATTGTGTTGAGAGCATGGAA
AGTACTTGTTACTGCATAAGGCGATTGGAACTAAGAAATTTGTTTGGGCT
TGTGCCGGATGCGGTTACGTTTTGAGGCCGTAAGAGAGCTGACCCCTGCT
ACTCTCCCCTCTTCTTGTCCCCGCCCCTATCTTTTATAGAGCAAGGCATT
GGACGTGGACGGTCTGTACATCGTACACGTACAATGCAACCGCGCGCCGA
AGCAGAGGCGCCGCACCTACAGGGCCCACGGACGCATCAACCGTGAGTGT
CTTGTCCGTATTGTTCATGGAAGTACATATTTTTTTTCATGTGTCGTATT
TTTCTTGAATTCCATGCCTCATCTACGACCTTGCCCTCAAAGCAAGAGTT
GTTCTTCGAGTACGCCGGTTGTGGGAAGCACGGACATCACAGGCGGTGTT
TGGTGGTAAACGGTGGGCGTATGTGCGACTCTTCTCTACGCGTTTGGCGG
GAGGGTAGGGTAGGAACCCCAAAGGAGTAAGAAGGCGAAGGCTAGTAAAG
GCCGCCTCTATCTTACAGTTGTTGCTGTCTTGGACGAAATCGGACAAGAA
CACGTGGCTGCGGCGCTCGATGCCGTTAGAGATATGTACGGAGTGGATCT
GCTAGTCGTGTTTATTCACTCCACGCATAGATGGATCTACTTTTGCGGTT
CAGTGTTGAAACGCCCGCGCGTGTTCGCGGACTCCGTGTTTATGCGGCAG
AGTTCTCGCCCCCCCACAATTACGCTTTTTAATATTATCGCGTCGCCTCT
GTTCTCCCTGTTTGACGCTTGCGCGTACGTTGAACGCAGCCTACATGTCC
AGCCCCGCACACATCGAGCTCATCCTCTCGGAGAAGGAAGTTCAGGTAAG
CGAGCAGTGAATGGGCTGGTCATGTGTTCGCACTTTTTGGGTATGTTTCC
ATCAGGAAGCGGGGAGGCGCCGTGTATGGCAAGTTTTTGGCTGCTAGTGT
ACATACGCCGACGAGACACCGTTTCATTTGTTCCTGTTATTGTAATGTTT
GTGGAGGGTAGGGTACAGTCGCACTTGCCCTCACAGGGATCAATCCAGCT
GCTAGCTTTTCTCTTTTTTGCGTGCTGTGTCAGTTTTGGTGTCGTTTTTT
GGTATTGCGACACGTGTATGTATTCTGCTGGCATGTGCTCTCAACCAGCA
GGAAGTGGATTGTTGCAACGATTTTCGCGCGGAGAGTCCACCCGTACCGT
GTACGCCAGGTACCATAATTGTGCTCCTATTTTTTTCGCTGCAAGATACC
ATGTTTCTTCGCGTCGTCCGTCATCTAATCCATCTCTCGTGGTTCGCCGT
TTTCGATGGATACATACTGCACAGGTGAAGAAGGGCGACGAGCCCAAGAA
GCCTACCCGCAAGCAGGTGGCCAAGACCCGTTTCGTCAAGGCTGGTGGCG
GTGTAGAGGTCTAAGCTGTAGCCCCTACTCTTGCTGCTGTTGGTTGCTCG
CTGCCGCGGCCGCAACATGAGTGGACTACGGCGTAGGTCCCAAGGAGGGT
TTGGTTTTTCGTCGGGAGTGCGCGTGCGTTTCTCGGGGGAATTTCCGAAA
GCCTTGCTTGCTTGGTAAAGCAAGCGGGTTGTAGCTGCTGCTGCTCTTGC
GTTGTGGCGGTTGCTCGCTTGCCCGAAAGCGCGCCACGCTTGGTGTCGCG
TGGTGCGACTGGTGCCCGGACGGTTATTAAAAACATAAAAAAAACACATG
TTGTGGAGTTTTCTGCACGTTTGTTCCTCGATTGCCGAAAACGGTGGCGG
CATATATATTGTTTCTGTCGCAACCGGGAACTCTGTCAGACCTCAAGCTG
TCAAAGGATCTTGAATGGTGCGTGAATTGCTGCCGTTTGCCACCGCGCTA
CTCTGGGGTTGTTGTCGTTGTGTGGCGATCTCACGCGCGTGCCGCAGTTG
GCGTTCATCCCCCCGCTGCTTGGGCTGACCGCCATACCCCCATGGTCATG
TGATGTTGCTGGTGATTCCGAAAGCTGCTGTCGCTCGCTCTCTCTTCGTG
CAGGGGTCGAACTTGAGGGTGATGCGATGGTAGCTAGGGTGGCCACCTCA
TTTTCATTTTCGTTCACA

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:568391..574258-

>mRNA_E-siliculosus-1a_M_contig94.17452.1 ID=mRNA_E-siliculosus-1a_M_contig94.17452.1|Name=mRNA_E-siliculosus-1a_M_contig94.17452.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1260bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:568391..574258- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGTTCAGTACAGATGGTTCAGTACAGCAAGGAGATCGAAGGCACCAAG
TCAAGGAGATCGAAGGCACCAAGTCCGCAAAGGCCCGCGGGTCTAACCTG
CGGGTCCACTTCAAGCACATGCGCGAGGTGGCGCACCTGATCAAGGGCAT
GAAGCTGTCCAAGGCGAAGGTGTACCTGCAGCCGCAAAGGCCCGCGGGTC
TAACCTGCGGGTCCACTTCAAGCACATGCGCGAGGTGGCGCACCTGATCA
AGGGCATGAAGCTGTCCAAGGCGAAGGTGTACCTGCAGGACGTACTCGAG
TACAAGCGCGCGGTGCCCTTCACCATGTTCACCGGCGGCGTCGGCAGGCA
CGCTCAGGGCAAGCTGCCTATCGCCAAGGACTACACGGGGGACCCGTCCA
GCAAGACGGACGTACTCGAGTACAAGCGCGCGGTGCCCTTCACCATGTTC
ACCGGCGGCGTCGGCAGGCACGCTCAGGGCAAGCTGCCTATCGCCAAGGA
CTACACGGGGGACCCGTCCAGCAAGACGGTGCCGGGAAACAAGCACAAGC
ACACCTTCGTGTCTCCAGGAAGCAAGTGCCGCTGGCCTCAGAAGGCGACC
CGCATCGTTCTCGACCTCGTCAAGAACGCCGAGTCTAACGCCGAGGTGCC
GGGAAACAAGCACAAGCACACCTTCGTGTCTCCAGGAAGCAAGTGCCGCT
GGCCTCAGAAGGCGACCCGCATCGTTCTCGACCTCGTCAAGAACGCCGAG
TCTAACGCCGAGAGCAAGGCATTGGACGTGGACGGTCTGTACATCGTACA
CGTACAATGCAACCGCGCGCCGAAGCAGAGGCGCCGCACCTACAGGGCCC
ACGGACGCATCAACCAGCAAGGCATTGGACGTGGACGGTCTGTACATCGT
ACACGTACAATGCAACCGCGCGCCGAAGCAGAGGCGCCGCACCTACAGGG
CCCACGGACGCATCAACCCCTACATGTCCAGCCCCGCACACATCGAGCTC
ATCCTCTCGGAGAAGGAAGTTCAGCCTACATGTCCAGCCCCGCACACATC
GAGCTCATCCTCTCGGAGAAGGAAGTTCAGGTGAAGAAGGGCGACGAGCC
CAAGAAGCCTACCCGCAAGCAGGTGGCCAAGACCCGTTTCGTCAAGGCTG
GTGGCGGTGTAGAGGTCTAAGTGAAGAAGGGCGACGAGCCCAAGAAGCCT
ACCCGCAAGCAGGTGGCCAAGACCCGTTTCGTCAAGGCTGGTGGCGGTGT
AGAGGTCTAA