mRNA_E-siliculosus-1a_M_contig94.17451.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Match: A0A6H5KPG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPG0_9PHAE) HSP 1 Score: 584 bits (1505), Expect = 2.380e-199 Identity = 496/619 (80.13%), Postives = 506/619 (81.74%), Query Frame = 1
Query: 388 MLAARRSSTSAVGVPSQESPRLQQPGSSSLEKTGGLKIANFRSSRRVSSSSKHSILPVIPLPPRLTNRTVGDDVSRRATARVRAASITRGRRTPPQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNDGEEPARSRDISALSTAGEAQVAPGAATAVAAAERQRTSRQQQRQGSAPLHTSSDREKPSHV--NRGRRASGSVAMVSAGASTAAXXXXXXXXXXXXXXXXAGRTEGISMHSDDGGAGRYRRVVTRRSSDTARPAMDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTAXXXXXXXXXXXXXXXXXSPCVSSVTPPPLQPRQRHRPSRPSQSLTPPPAIREAPTITSRPP--------------------------------------PRTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKCRSDSGSSCPDSSAIAGPTAAPRGFPAESEDGRGXXXXXXXXXXXXXXXX-----NAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVPSTRSDRHVHAV 2109
MLAARRSSTSAVGVPSQES RLQQPGSSS+EKTGGLKIANFRSSRRVSSSSKH VGDDVSR+ATA+VRAASITRGRRTPP+AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX ARSR+ SA+STAG Q APGAATAV AAERQR SRQ QRQGSA LH SS R+ PS V NRGRRAS SV MVSAGASTAA XXXXXXXXXXXXXXX GRTEGISMHSDDGGAGRYRRVV RRSSDTARPA+DLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWAD SPSGDSVGTA XXXXXXXXXXXXXX SP VSSVTPPPLQ RQRHRPSRPSQSLTPPPA REAP ITSRPP RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVK RSDSGSSCPDS A+AGP AAPRGFPAESED R XXXXXXXXXXXXXXXX NA TVSPSRRCCVEGRLEVMERNV AVLRRLDELEKRKSKGGNDDRSV STRSDRHVHA+
Sbjct: 1 MLAARRSSTSAVGVPSQESSRLQQPGSSSVEKTGGLKIANFRSSRRVSSSSKHR---------------VGDDVSRQATAQVRAASITRGRRTPPKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSAPTKXXXXXXXXXXXXXXXXXXXXXXXS----------ARSRNNSAVSTAGVGQAAPGAATAVVAAERQRASRQHQRQGSAHLHMSSGRKNPSRVLENRGRRASRSVTMVSAGASTAACXXXXXXXXXXXXXXXXGRTEGISMHSDDGGAGRYRRVVMRRSSDTARPAVDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADGSPSGDSVGTASXXXXXXXXXXXXXXRSSPYVSSVTPPPLQSRQRHRPSRPSQSLTPPPATREAPIITSRPPRLANDYDEEDSDSTPRAGARPAGXXXXXTAAPVLLSRSERTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKSRSDSGSSCPDSPAVAGPMAAPRGFPAESEDRRXXXXXXXXXXXXXXXXXXXXXXNAETVSPSRRCCVEGRLEVMERNVKAVLRRLDELEKRKSKGGNDDRSVQSTRSDRHVHAI 594
BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Match: D7FU32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU32_ECTSI) HSP 1 Score: 278 bits (710), Expect = 1.360e-85 Identity = 205/323 (63.47%), Postives = 207/323 (64.09%), Query Frame = 1
Query: 1141 MVSAGASTAAXXXXXXXXXXXXXXXXAGRTEGISMHSDDGGAGRYRRVVTRRSSDTARPAMDLGQKEQAWKRERAQLLTVIKLQHRQLMMRPSSSSSCSWADASPSGDSVGTAXXXXXXXXXXXXXXXXXSPCVSSVTPPPLQPRQRHRPSRPSQSLTPPPAIREAPTITSRPPPRTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKCRSDSGSSCPDSSAIAGPTAAPRGFPAESEDGRGXXXXXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVPSTRSDRHVHAV 2109
MVSAGASTAA XXXXXXXXXXAG TEGISMHSDDGGAGRYRRVVTRRSSDTARPA+DLGQKEQAWKR RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVK RSDSGSSCPDSSA+AGPTAAPRGFPAESEDGR XXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSV STRSDRHVHAV
Sbjct: 1 MVSAGASTAACPAAGTXXXXXXXXXXAGWTEGISMHSDDGGAGRYRRVVTRRSSDTARPAVDLGQKEQAWKRSE-----------------------------------------------------------------------------------------------------RTHLLGRVELQREKAAARGVGRLQAGRGRGLASAGSVKSRSDSGSSCPDSSAVAGPTAAPRGFPAESEDGR-RGGXXXXXXXXXXXXXNAVTVSPSRRCCVEGRLEVMERNVTAVLRRLDELEKRKSKGGNDDRSVHSTRSDRHVHAV 221 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17451.1 >prot_E-siliculosus-1a_M_contig94.17451.1 ID=prot_E-siliculosus-1a_M_contig94.17451.1|Name=mRNA_E-siliculosus-1a_M_contig94.17451.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=704bp MSAELYERQMAWKQFISQRSDERGRAIVSDVYRSSMPDRWQVDPEENQGRback to top mRNA from alignment at E-siliculosus-1a_M_contig94:561940..567294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig94.17451.1 ID=mRNA_E-siliculosus-1a_M_contig94.17451.1|Name=mRNA_E-siliculosus-1a_M_contig94.17451.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5355bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:561940..567294- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:561940..567294- >mRNA_E-siliculosus-1a_M_contig94.17451.1 ID=mRNA_E-siliculosus-1a_M_contig94.17451.1|Name=mRNA_E-siliculosus-1a_M_contig94.17451.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4224bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:561940..567294- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |