prot_E-siliculosus-1a_M_contig94.17447.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17447.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17447.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length182
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17447.1 vs. uniprot
Match: A0A6H5KPM9_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPM9_9PHAE)

HSP 1 Score: 339 bits (869), Expect = 1.830e-117
Identity = 174/181 (96.13%), Postives = 178/181 (98.34%), Query Frame = 0
Query:    1 MVLLRNVAVLVVLSLSAAVVSAFVPGGNPGGMAKAAAVKLEGGGTKTPIRAITHPRTNVKEIASVSNTEEFESLLGLARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLTNNLVVVSVDVNQVAQVPQRQKIKDLPTIQFFVDGGVVGSYVANDRGEAFYANMEKHLRAALGEDVE 181
            MVL RNVAVLVVLSLSAAV SAFVPGGNPGGMAKAAAV+LEGGGTKTPIRAITHPRTNVKEIASVSNTEEFESLL LARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYL+NNLVVVS+DVNQVAQVPQRQKIKDLPTIQFFVDGG+VGSYVANDRGEAFYANMEKHLRAALGEDVE
Sbjct:    1 MVLSRNVAVLVVLSLSAAVASAFVPGGNPGGMAKAAAVQLEGGGTKTPIRAITHPRTNVKEIASVSNTEEFESLLRLARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLSNNLVVVSIDVNQVAQVPQRQKIKDLPTIQFFVDGGMVGSYVANDRGEAFYANMEKHLRAALGEDVE 181          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17447.1 vs. uniprot
Match: B7ZGM8_9PHAE (Thioredoxin-like 5 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGM8_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 5.280e-66
Identity = 104/149 (69.80%), Postives = 123/149 (82.55%), Query Frame = 0
Query:   33 AKAAAVKLEGGGTKTPIRAITHPRTNVKEIASVSNTEEFESLLGLARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLTNNLVVVSVDVNQVAQVPQRQKIKDLPTIQFFVDGGVVGSYVANDRGEAFYANMEKHLRAALGEDVE 181
            A A   + + GGT+TPI AI  P T  KEI +V N EEF+ ++  ARPKQVVA+WF ASWCRKCKYIG+RL+RLDEHLPAYLTNNLV+VS+DVN+VA+VPQRQKIKDLPTIQFFV+G  VGSYVA D+GEAFY+NME+HLRAA  +  E
Sbjct:   45 AVATGARRDVGGTRTPISAIASPVTT-KEIQTVGNVEEFDRIV--ARPKQVVAVWFQASWCRKCKYIGSRLRRLDEHLPAYLTNNLVLVSIDVNKVAEVPQRQKIKDLPTIQFFVEGKEVGSYVATDKGEAFYSNMERHLRAAQEDTTE 190          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17447.1 vs. uniprot
Match: A0A6T6LFR0_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A6T6LFR0_9RHOD)

HSP 1 Score: 70.1 bits (170), Expect = 7.520e-12
Identity = 31/69 (44.93%), Postives = 48/69 (69.57%), Query Frame = 0
Query:   81 KQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLTNNLVVVSVDVNQVAQVPQRQKIKDLPTIQFFVDG 149
            K +VAI FHA+WCRKC ++  ++++L    P     N++   VD+N VA++P+RQ+I ++PTIQ F DG
Sbjct:   79 KSIVAIAFHAAWCRKCIWLIPKIEKLAVEYP-----NILFAKVDINTVAEIPRRQEIHNIPTIQIFQDG 142          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17447.1 vs. uniprot
Match: A0A5D3DCH1_CUCME (Thioredoxin H1-like n=3 Tax=Benincaseae TaxID=1003877 RepID=A0A5D3DCH1_CUCME)

HSP 1 Score: 53.5 bits (127), Expect = 4.270e-6
Identity = 29/101 (28.71%), Postives = 54/101 (53.47%), Query Frame = 0
Query:   72 ESLLGLARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLTNNLVVVSVDVNQVAQVPQRQKIKDLPTIQFFVDGGVVGSYVANDRGEAFYANMEKHL 172
            + LL   +  ++V + F A+WC  C+ +   LK L   +    +NN++V+ VDV+++  V     +  LP+ QFF +G +V  +V   R +  +  + KH+
Sbjct:   18 QQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKM----SNNVIVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGA-RKDVLHKTVSKHV 113          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17447.1 vs. uniprot
Match: A0A7C6LS03_9CLOT (Thioredoxin n=2 Tax=Clostridiaceae bacterium TaxID=1898204 RepID=A0A7C6LS03_9CLOT)

HSP 1 Score: 52.0 bits (123), Expect = 1.330e-5
Identity = 24/85 (28.24%), Postives = 44/85 (51.76%), Query Frame = 0
Query:   88 FHASWCRKCKYIGTRLKRLDEHLPAYLTNNLVVVSVDVNQVAQVPQRQKIKDLPTIQFFVDGGVVGSYVANDRGEAFYANMEKHL 172
            F A WC  C+ +G  +++L EH        L +  V+V+  A++ +R ++ ++PT+  F DG +V   V     E     ++KH+
Sbjct:   25 FWAPWCAPCRLVGPSVEKLKEHYKG----KLEIGKVNVDDEAELAERYRVMNIPTLYLFKDGEIVDKMVGARPFEDLVRTVDKHI 105          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17447.1 vs. uniprot
Match: A0A5A7U8S0_CUCME (Thioredoxin H1-like n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7U8S0_CUCME)

HSP 1 Score: 53.5 bits (127), Expect = 1.700e-5
Identity = 29/101 (28.71%), Postives = 54/101 (53.47%), Query Frame = 0
Query:   72 ESLLGLARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLTNNLVVVSVDVNQVAQVPQRQKIKDLPTIQFFVDGGVVGSYVANDRGEAFYANMEKHL 172
            + LL   +  ++V + F A+WC  C+ +   LK L   +    +NN++V+ VDV+++  V     +  LP+ QFF +G +V  +V   R +  +  + KH+
Sbjct:   18 QQLLKAKQYNKLVVVNFTATWCAPCRGMAPVLKDLANKM----SNNVIVLKVDVDELMSVANEYGVGALPSFQFFKNGKLVDKFVGA-RKDVLHKTVSKHV 113          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17447.1 vs. uniprot
Match: A0A0F7UN03_TOXGV (Thioredoxin n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=A0A0F7UN03_TOXGV)

HSP 1 Score: 50.1 bits (118), Expect = 7.100e-5
Identity = 30/111 (27.03%), Postives = 57/111 (51.35%), Query Frame = 0
Query:   62 IASVSNTEEFESLLGLARPKQVVAIWFHASWCRKCKYIGTRLKRLDEHLPAYLTNNLVVVSVDVNQVAQVPQRQKIKDLPTIQFFVDGGVVGSYVANDRGEAFYANMEKHL 172
            +  V+   +F+SL+      ++V + F+A WC  C+ +   ++ + E  P Y    +  V +DV+++A V +R++I  +PT + F  G  V + V     E     ++KHL
Sbjct:    3 VHHVTTEAQFKSLI---EENEMVLVDFYAVWCGPCRQVAPLVEAMSEK-PEYA--KVKFVKIDVDELADVAEREEINAMPTFKLFKQGKAVDT-VLGANAERVEEMVKKHL 106          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5KPM9_9PHAE1.830e-11796.13Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
B7ZGM8_9PHAE5.280e-6669.80Thioredoxin-like 5 n=1 Tax=Laminaria digitata TaxI... [more]
A0A6T6LFR0_9RHOD7.520e-1244.93Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5D3DCH1_CUCME4.270e-628.71Thioredoxin H1-like n=3 Tax=Benincaseae TaxID=1003... [more]
A0A7C6LS03_9CLOT1.330e-528.24Thioredoxin n=2 Tax=Clostridiaceae bacterium TaxID... [more]
A0A5A7U8S0_CUCME1.700e-528.71Thioredoxin H1-like n=1 Tax=Cucumis melo var. maku... [more]
A0A0F7UN03_TOXGV7.100e-527.03Thioredoxin n=15 Tax=Toxoplasma gondii TaxID=5811 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 66..169
e-value: 1.4E-14
score: 53.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 43..177
score: 9.927
NoneNo IPR availableGENE3D3.40.30.10coord: 51..176
e-value: 1.8E-18
score: 68.4
NoneNo IPR availablePANTHERPTHR10438THIOREDOXINcoord: 63..157
NoneNo IPR availablePANTHERPTHR10438:SF391THIOREDOXINcoord: 63..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..22
score: 0.921
NoneNo IPR availableTMHMMTMhelixcoord: 7..26
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 59..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:521155..523998 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17447.1mRNA_E-siliculosus-1a_M_contig94.17447.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 521063..525203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17447.1 ID=prot_E-siliculosus-1a_M_contig94.17447.1|Name=mRNA_E-siliculosus-1a_M_contig94.17447.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=182bp
MVLLRNVAVLVVLSLSAAVVSAFVPGGNPGGMAKAAAVKLEGGGTKTPIR
AITHPRTNVKEIASVSNTEEFESLLGLARPKQVVAIWFHASWCRKCKYIG
TRLKRLDEHLPAYLTNNLVVVSVDVNQVAQVPQRQKIKDLPTIQFFVDGG
VVGSYVANDRGEAFYANMEKHLRAALGEDVE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR013766Thioredoxin_domain