mRNA_E-siliculosus-1a_M_contig94.17441.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17441.1
Unique NamemRNA_E-siliculosus-1a_M_contig94.17441.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17441.1 vs. uniprot
Match: D8LN09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN09_ECTSI)

HSP 1 Score: 708 bits (1827), Expect = 3.250e-249
Identity = 444/476 (93.28%), Postives = 444/476 (93.28%), Query Frame = 1 
Query:    1 MQKPRGRPTFALLCYYLGAATTTRTLPTAVSGFHHPCAARRVRRRPAGQALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWRSPGQATAXXXXXLQCAXGDDEDDNYGSADYSEYGYEPEFELQGEEPNADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGDWQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAETLAVAGGGADGPWIEVGLRVQDVRMRCVFEYGSGAGGSVDAEEGGGVPAXXXXXXXXXXGSTSIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLPMEKF 1428
            MQKPRGR TFALLCYYLGAATTTRTLPTAVSGFHHPCAARRVRRRPAGQA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          XXXXX    X      NYGSADYSEYGYEPEFELQGEEPNADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIG WQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAETLAVA GGADGPWIEVGLRVQDVRMRCVFEYG GAGGSVDAE       XXXXXXXXXXGSTSIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLPMEKF
Sbjct:    1 MQKPRGRATFALLCYYLGAATTTRTLPTAVSGFHHPCAARRVRRRPAGQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNYGSADYSEYGYEPEFELQGEEPNADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGSWQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAETLAVAAGGADGPWIEVGLRVQDVRMRCVFEYGPGAGGSVDAEXX--XXXXXXXXXXXXXGSTSIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLPMEKF 474
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17441.1 vs. uniprot
Match: A0A7S4B393_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B393_CHRCT)

HSP 1 Score: 124 bits (312), Expect = 6.480e-27
Identity = 103/314 (32.80%), Postives = 135/314 (42.99%), Query Frame = 1 
Query:  475 DEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGDWQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAETLAVAGGGADGPWIEVGLRVQDVRMRCVFEYGSGAGGSVDAEEGGGVPAXXXXXXXXXXGSTSIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLP 1416
            D E L ++R ++  AN RWQ   +    +G+W G    Y AE   +G          + ++P      ++      +E     +  E      TG + + A+  +           L   SF    G   VG AYT +  L     G  G  IEVGLR +  R+RC F Y        D E  G  PA              + ++ VVRE +       A          G GLYDPP   R+  YFS+Y E GLT+ FP        G  SVDWTAG+ RYQADR F  LDGSL  LE+TEI   DAE +LP
Sbjct:  152 DMELLEKYRRQQWEANSRWQLNVFAQGQLGSWEGVCTPYAAEVSPSGG---------VEMLPQPSAPCSS---HAAVEKNNAVECSE------TGHDARLALNMQ-----------LTPSSFDREKGCMTVGTAYTMSRRLDAEAAG--GLLIEVGLREKAQRVRCKFLY------LPDDESRGSGPAQMLR----------LEKLAVVRENVVGTAAPAASPP-------GGGLYDPPPGDRTN-YFSLYCEDGLTLVFPTTCATDAAGFISVDWTAGAMRYQADRKFHQLDGSLASLELTEISAADAETYLP 410
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17441.1 vs. uniprot
Match: W7TMB2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TMB2_9STRA)

HSP 1 Score: 122 bits (307), Expect = 3.150e-26
Identity = 108/332 (32.53%), Postives = 150/332 (45.18%), Query Frame = 1 
Query:  421 SEYGYEPEFELQGEEPN--ADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGDWQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAETLAVAGGGADGPWIEVGLRVQDVRMRCVFEYGSGAGGSVDAEEGGGVPAXXXXXXXXXXGSTSIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVF 1410
            SEY Y+ E+  Q  E     D+E LAR+R +   +ND+WQ   +     G W G W EY  E  S G + E+ +  M  I  G+          R +   E T +       A GG  +  V  E    P          SFRG  G     N ++ +       G  +    E+ +R  D R R  F Y S              PA           +    +V V +E L +  P    +EPEL+GS+G+G+YDP +  R P  + +   GGL++ FP  +  GQ G   VDWTAG+ R+QADR+FD  DG+L  LEVT+IGTQD+  F
Sbjct:  112 SEYEYQSEYTDQQAEIEYLGDDELLARYRADMQNSNDQWQLNLFLKAQTGIWSGVWSEYTPEPNS-GPNGETVL-RMTNIYKGRH-ECEGDYDARSVWWREVTLLHA-----ADGGPLEPVVVGERRMEPT---------SFRGELGAMAADNVFSCSHVRFK--GATEVFEAEIWIRQGDYRTRVTFVYKSPD------------PAY----------AFQASKVLVKKERLGKEGP--TAEEPELFGSSGRGIYDPNA--RVPGSWVLSLHGGLSLAFPPTLPRGQRGAVIVDWTAGTMRFQADRIFDRPDGTLGSLEVTQIGTQDSLTF 398
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17441.1 vs. uniprot
Match: A0A0M0JC69_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JC69_9EUKA)

HSP 1 Score: 112 bits (279), Expect = 1.220e-22
Identity = 100/329 (30.40%), Postives = 142/329 (43.16%), Query Frame = 1 
Query:  460 EEPNADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGDWQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVET-LFSDSFRGGNGTQVVGNAYTSAETLAVAGG----GADGPWIEVGLRVQDVRMRCVFEYGSGAGGSVDAEEGGGVPAXXXXXXXXXXGSTSIRRVFVVRE--GLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLPMEK 1425
            EE   DE  L ++R ++   N RWQ   +    +G W G  + Y+A+D           G M+      K + +T  +      A +T                G      EA  Q  +E  L   +FR   G   V +A++ +   A  GG      +   +E+ L   + R+RC   Y        D  E   V               SI ++ +VRE  G  +    +A    +L G+ G+GLYDPP   +S  Y S+Y EGG+T+ FP  V  G  GV S+DW AGS RYQ DR + V DGSL  LE+TEI   DAE+  P  +
Sbjct:  140 EEDIEDEALLEQYRQKRWDDNARWQLNTFAQSQLGKWAGHMELYLADDA----------GRML-----PKELKSTACSCEARVCASNTI---------------GLTESLPEAAAQLTLEAELGLAAFRPEVGNMAVASAFSVSRRGADVGGESARAGEPLLLELALGEAERRVRCKLLY------VADRGEAAAVRPY------------SIAQLAIVREVRGGGQFIDGNAGSA-DLDGTPGRGLYDPPPGDKSG-YISLYLEGGMTLAFPTSVAAGAAGVISLDWIAGSMRYQIDRKWKVFDGSLSSLELTEIRKDDAEIVPPSTR 418
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17441.1 vs. uniprot
Match: A0A7S0I494_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I494_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 1.510e-21
Identity = 103/327 (31.50%), Postives = 137/327 (41.90%), Query Frame = 1 
Query:  460 EEPNADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGDWQEYVAEDLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGN-GTQVVGNAYTSAETLAVAGGGADGPWIEVGLRVQDVRMRCVFEYGSGAGGSVDAEEGGGVPAXXXXXXXXXXGSTSIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLSRSPLYFSIYAEGGLTMR----FPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLPMEK 1425
            EE   DEE L   R  K   N RWQ   +  + +G+W G    Y   DL    D           +P     AT+      + S  D+  +  E G     EG+      + A       TL S+SF     G   VGNA+T +     +G G+    +EVGL+    R+R    Y        D +E G  P               +RRV +VRE        DA       G  G GLYD P+  +   Y S+Y EGGLT+      PL  ++   G  S+DWT    RYQADR F VLDGSL   E+TEI + D++ + P  K
Sbjct:  132 EEGLDDEELLEAMRERKWAENARWQLNVFAQEQLGDWQGKCTVY---DLVPAEDG----------VPRLVEAATSACASGAVISGGDSVDWRDELG-----EGEALAAMTTAA-------TLSSESFYPQKQGNMAVGNAFTLS-----SGPGSVPLLLEVGLKEAAERVRAKLVY--------DLDESGAAP------------QMRLRRVAIVREASGA----DAAAADAGLGRPGTGLYDVPAGDKEK-YCSLYCEGGLTLVCPFVLPLAPDDEARGCISLDWTGAKMRYQADRKFGVLDGSLSTFELTEILSTDSQDYTPDFK 403
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17441.1 vs. uniprot
Match: A0A0G4G6Y0_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G6Y0_9ALVE)

HSP 1 Score: 89.4 bits (220), Expect = 3.290e-15
Identity = 100/356 (28.09%), Postives = 145/356 (40.73%), Query Frame = 1 
Query:  472 ADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGDWQEYVAEDLSAGSD--PESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAET-LAVAGGGADGP--------WIEVGLRVQD--VRMRCVFEYGSGAGGSVDAEEGGGVPAXXXXXXXXXXGSTSIRRVFVVREGLDRLPPE-DADK-----EPELYGSA-GKGLYDPPSLSRSPLYFSIYAEGGLTMRFPLRV------EEGQG---------------GVFSVDWTAGSRRYQADRVFDVLDGSLRRLEVTEIGTQDAEVFLP 1416
            +DEE L + R  +   ND WQF  +  +  G+W G  QEY     S   +   E +  + + +  G    ++  I R +  + +                                VE L     R   G Q+VG A+T      + +    DGP          EVG+R +D   R+R + +Y          EE G               S  +R + VVRE   R   E +A +     + +L+ +  GKG+YD P +S  P Y ++   G LT+  PL+V      +  QG               G  SVDWT G  RYQADR FD LDGS+  LE TEI  +DA+V++P
Sbjct:   95 SDEEILEKMRESRQTTNDMWQFLLFA-EMAGDWEGLTQEYRLSSTSGELELVEEEETSSSLRVEGGTDPSSSRLIFRNLFGANQ--------------------------------VEELSPTDCRPQKGKQIVGTAFTLCTCPTSSSERRPDGPEERPPQSHLCEVGIRSKDNKKRIRVILDY------EQKEEESGP--------------SWELRSLKVVREVRVRSANETEASRTFNRMDTDLFWTQPGKGIYDLPPVSSQPEYRTLSVMGRLTVCLPLKVGVSWEKQLRQGATDQVPFREGGTKVVGAISVDWTIGKMRYQADRKFDRLDGSISSLEETEILGEDADVYVP 397
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LN09_ECTSI3.250e-24993.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S4B393_CHRCT6.480e-2732.80Hypothetical protein n=2 Tax=Chrysotila carterae T... [more]
W7TMB2_9STRA3.150e-2632.53Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0M0JC69_9EUKA1.220e-2230.40Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A7S0I494_9EUKA1.510e-2131.50Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A0G4G6Y0_9ALVE3.290e-1528.09Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:476601..483046 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1431
Model size2260
Exons7
Ec32 orthologEc-27_000940.1
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2E86R@1,2SEQ5@2759
Seed eggNOG ortholog2880.D8LN09
Seed ortholog evalue4.7e-202
Seed ortholog score710.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17441.1prot_E-siliculosus-1a_M_contig94.17441.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig94 477430..483046 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936502.3244493-UTR-E-siliculosus-1a_M_contig94:476600..4774291622936502.3244493-UTR-E-siliculosus-1a_M_contig94:476600..477429Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 476601..477429 -
1696251107.54114-UTR-E-siliculosus-1a_M_contig94:476600..4774291696251107.54114-UTR-E-siliculosus-1a_M_contig94:476600..477429Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig94 476601..477429 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936502.3384292-CDS-E-siliculosus-1a_M_contig94:477429..4776101622936502.3384292-CDS-E-siliculosus-1a_M_contig94:477429..477610Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 477430..477610 -
1696251107.5548167-CDS-E-siliculosus-1a_M_contig94:477429..4776101696251107.5548167-CDS-E-siliculosus-1a_M_contig94:477429..477610Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 477430..477610 -
1622936502.3585205-CDS-E-siliculosus-1a_M_contig94:478487..4785911622936502.3585205-CDS-E-siliculosus-1a_M_contig94:478487..478591Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 478488..478591 -
1696251107.5658824-CDS-E-siliculosus-1a_M_contig94:478487..4785911696251107.5658824-CDS-E-siliculosus-1a_M_contig94:478487..478591Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 478488..478591 -
1622936502.3799565-CDS-E-siliculosus-1a_M_contig94:480173..4804581622936502.3799565-CDS-E-siliculosus-1a_M_contig94:480173..480458Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 480174..480458 -
1696251107.577368-CDS-E-siliculosus-1a_M_contig94:480173..4804581696251107.577368-CDS-E-siliculosus-1a_M_contig94:480173..480458Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 480174..480458 -
1622936502.3965306-CDS-E-siliculosus-1a_M_contig94:480920..4810831622936502.3965306-CDS-E-siliculosus-1a_M_contig94:480920..481083Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 480921..481083 -
1696251107.58875-CDS-E-siliculosus-1a_M_contig94:480920..4810831696251107.58875-CDS-E-siliculosus-1a_M_contig94:480920..481083Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 480921..481083 -
1622936502.4142387-CDS-E-siliculosus-1a_M_contig94:481601..4817211622936502.4142387-CDS-E-siliculosus-1a_M_contig94:481601..481721Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 481602..481721 -
1696251107.6056561-CDS-E-siliculosus-1a_M_contig94:481601..4817211696251107.6056561-CDS-E-siliculosus-1a_M_contig94:481601..481721Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 481602..481721 -
1622936502.4365885-CDS-E-siliculosus-1a_M_contig94:482168..4823411622936502.4365885-CDS-E-siliculosus-1a_M_contig94:482168..482341Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 482169..482341 -
1696251107.6178663-CDS-E-siliculosus-1a_M_contig94:482168..4823411696251107.6178663-CDS-E-siliculosus-1a_M_contig94:482168..482341Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 482169..482341 -
1622936502.455213-CDS-E-siliculosus-1a_M_contig94:482641..4830461622936502.455213-CDS-E-siliculosus-1a_M_contig94:482641..483046Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 482642..483046 -
1696251107.6356504-CDS-E-siliculosus-1a_M_contig94:482641..4830461696251107.6356504-CDS-E-siliculosus-1a_M_contig94:482641..483046Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig94 482642..483046 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig94.17441.1

>prot_E-siliculosus-1a_M_contig94.17441.1 ID=prot_E-siliculosus-1a_M_contig94.17441.1|Name=mRNA_E-siliculosus-1a_M_contig94.17441.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=477bp
MQKPRGRPTFALLCYYLGAATTTRTLPTAVSGFHHPCAARRVRRRPAGQA
LSPPPQQQLSNQKRSPRPVEAAQQQARGCGSSLMAGGGSVGGSGSSRSDP
ASHGGGSRWRSPGQATAASSSVLQCAAGDDEDDNYGSADYSEYGYEPEFE
LQGEEPNADEETLARWRLEKLLANDRWQFGKYGTQNVGNWIGDWQEYVAE
DLSAGSDPESDIGAMIGIIPGKKFVATTKITRRVIESAEDTKIFEHEQGQ
ATGGEGQGAVGYESEACPQPVVETLFSDSFRGGNGTQVVGNAYTSAETLA
VAGGGADGPWIEVGLRVQDVRMRCVFEYGSGAGGSVDAEEGGGVPAPEAA
AAAAAAGSTSIRRVFVVREGLDRLPPEDADKEPELYGSAGKGLYDPPSLS
RSPLYFSIYAEGGLTMRFPLRVEEGQGGVFSVDWTAGSRRYQADRVFDVL
DGSLRRLEVTEIGTQDAEVFLPMEKF*
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mRNA from alignment at E-siliculosus-1a_M_contig94:476601..483046-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig94.17441.1 ID=mRNA_E-siliculosus-1a_M_contig94.17441.1|Name=mRNA_E-siliculosus-1a_M_contig94.17441.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6446bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:476601..483046- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCAGAAGCCAAGAGGCAGGCCGACCTTCGCCCTCCTCTGCTACTACCT
GGGAGCAGCAACTACAACAAGAACCCTCCCGACCGCGGTGTCCGGCTTCC
ATCACCCTTGCGCCGCCCGCCGCGTCCGCCGCCGCCCAGCGGGGCAGGCG
CTTAGCCCTCCCCCCCAGCAACAGTTGTCCAACCAAAAAAGGAGCCCCAG
GCCTGTGGAGGCGGCGCAACAGCAAGCCCGGGGCTGCGGGTCAAGCTTGA
TGGCCGGCGGAGGTAGCGTCGGCGGCAGCGGTAGCTCCAGGAGCGATCCC
GCTTCCCACGGTGGCGGGAGCAGGTGGAGATCTCCGGGGCAGGCGACTGC
GGCTTCCTCCTCGGTGCTGCAGTGCGCCGCTGGAGACGACGAAGACGACA
ATTACGTGAGTTTCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGTGTCGGTGGTACTGTAGTGACTTCTGCCTAGATGGGAGGAGGTCTTTT
GGGTACTCATGTGGTTCGGTTGTGGCGTTCGTTTTGTTGTAGTTGGTACA
TGGTTTCGTTAATATATTGTTTCGACCTGCCTGGTTGAGGGGGCGGTCTT
TTTGGTACGCATGTGATTCGGTTTGGTGGCGTTTTCTGTGGGTGTTGGTA
ACTAAGCTCGTTTAATATCTTGTGTCGGCCCTCACTTGCGCGGACGGGGG
CGCAGGGGAGCGCTGACTACTCCGAGTACGGCTACGAGCCGGAGTTCGAG
CTGCAGGGGGAGGAGCCGAACGCAGACGAAGAGACGCTGGCGAGGTGGCG
GTTGGAGAAGCTTCTTGCCAACGACCGGTGGCAGTTCGGCAAGTACGGGA
CGCAAAACGTGGGCAACTGGATCGGTGAGTGAGGGGGTCCGGTGGTGTTG
CGCTTCTTCTTCTTTTAAGCCTCGTTTCTGGAATACGCGGGGTGCAACAC
CAAGTCCGCGATGCCTGTGGAGCGCGACAGCATGTGCGCAGGTCGCCAGT
TGTGCCGATATGTCATTTCGGGTGGGCGGGTGCATGTGTTGCGTGTCCAG
CTATGTTGGACCCGCCTCTCACAGAACCGGGCGCTTCCGTGCTTCAATTC
AAGCACGGCTTGTGAGATCGTTCGCGTGTGCTTGGCCTCTCCTCCTCGAG
ATGAACCGTTAACCTACGCTGGCTCCCCGCCCGTGTGCCGCACCAAAAGT
AGCGAATAGGTCGTCAAGGTTGAGGGGAAACCCGTTTCCCGCAGATGTGT
TGGTTTTTGGCGTGGCTGACTGATTTCGCGAGTGGTCTTGCTTGGGGTCG
CCGTCGCTCGCGTTATTGTAGGGAGCTGGCAGGAGTACGTCGCGGAAGAC
CTCAGCGCGGGGTCAGACCCAGAGAGCGACATCGGGGCCATGATCGGCAT
CATTCCGGGAAAGAAGTTCGTGGCCACCACCAAGATCACCCGCAGGTTTG
TGTGCTTATGCGCGGATGGAAACGCGTTTTTGGCACCCCGTATGTGTTTT
TTTTCTATTTTTGTGCCCAGCACGCAGAGAACTATGACTCTTATGTGTCT
TGTCCGTGTAGTGCATGCATGGCGTTGGGACACACGGCCCTCGTCGTGAG
ACACCAACCGTCTTTTTAGGAAACAAACCGTTTGTCAAGTCGAAGGACTA
CATGGCGCCTATTTCCTGTGCTGAATGTCGTCAAATCGGCACGCACGTCA
TCAGGGCCTGAAATAGAATTCGGTGTAATTTATAGACCAACAGATGTGCT
CACTCGGTACCCACAACGAACACCTCTCCCTCTGGTGCACACGTGTTCAC
CCTCCGATACTGTTATCTGTTTGCCGGCACGACCCATCAACAACAACAAC
AACAACAACAACAACGACGACGACGACGAGAGTCGGGCTCAGCCAACATG
CGCCGGCGGGGTGCCCTCACACGCCCCCGTGTCTCGTGGTGTTCTTACTT
CAACCACGCGCAGGGTTATCGAGTCGGCGGAAGACACCAAGATATTCGAG
CACGAGCAGGGGCAGGCGACGGGGGGGGAAGGGCAGGGGGCGGTGGGATA
CGAATCCGAGGCGTGTCCGCAGCCGGTGGTCGAGACCCTCTTCTCCGACT
CGTTCCGAGGCGGCAACGGCACCCAGGTGCGTGTCTTCAGCGTACCGGAT
TTTTAGGGTCGTGCGTGCTTTCGTTTGGCGAGGGGGGGGGGTCGTAATCA
TATATGACATTATTCTTCCTGTCGGTGTTTTTTTTCCTGTTACGTTGATG
TAGTGGGTAGTGAGGTAGTGGTGTTGGCAGAACGGGGGCTTAGTTCGCCC
TAACGAGAGGTAGAGAGTAATGGATCCTCGTCTGCGATGGCGTGGTCGAT
TACCGTCGTGTCGAGTGTGTGTGTGGGGGGGGGGGTGTTGGTTGACAGCG
GCCTGCCTATCCGGTTGTTGTCGGGTCTTTGACGATACTGCTGTTGTCGC
ACCTCTGCTGCTGCTATTGCTACTGCTGCTCTTGCGCTATCCTTCGACGC
GCGTGCCACAACGGCGTCATCGGCCGCAACCGCCGCCACCACCACCACCA
ACCCGGTCCTCCTTCATCTCACCACGGACGCGAACAAGGTCGTCGGAAAC
GCGTACACCTCGGCGGAAACTCTGGCAGTGGCGGGGGGGGGCGCGGATGG
CCCCTGGATAGAGGTAGGCCTTCGGGTCCAGGACGTCCGAATGCGGTGCG
TTTTCGAGTACGGATCGGGAGCGGGGGGCTCCGTCGACGCAGAGGAGGGG
GGAGGGGTACCGGCACCAGAGGCAGCAGCAGCAGCAGCAGCAGCAGGGTC
GACGAGCATCCGGAGGGTGTTTGTGGTCCGGGAGGGGCTCGACAGACTGC
CGCCGGAGGACGCCGATAAGGAGGTGAAAAGCAAGAGAGGGGGATCGAAC
GCAGAACAATGGAATTTCGGGGGGGGGGGTGTACTCATAGACGTGCATGC
CGTAGTCGTTAGACCATTGCCCTCGTATCCCTATGAAACCGGGACGGAAC
ACGCCGAGATCTCACCGGACCAGGGGGCCAGGGGGTGTGCTCATAGCCGT
GCACGCCGTAGTCGTTAGAACAGGAGCACGCCGAGATCTCGCCGGATCAG
GCTCTCACATCACCAAGCGCGAAGCGCCGTGAGGTATTCGGCGAGTCGCA
TGAAAGGTGCGCTGCATCCTTTGCTAAAGGTGTTCGGCATCTTGTACGTC
CATGCATACGGATGACAGCCGCGAATGACTCTGGTGCTTTCACTTGCAGA
GACAGTTGTAAGCACTGTGTAACTGCCCCCAGAGTGCTTGACCAGTTCAA
CACAACGTGGTGCGATCATCCCCTGTGCGCGGAGTGAGGGTTCTCGACCC
CGCACAACATGATCTACTCGACCACCATCATGGTTACCCCAAGAAAGAGA
AACAGAGTAAAAAAAAAAAAGCGGTAACCTGATGGTGGAGCTCACGAAGC
GACGGGCGTGTTTTACAGCGTGGTTACCAAGCGACGAAAACCCAACCCCA
ATGGCAAACACCGGGGGGTGGGGAGGGGGGGCGTACTCTTATGTTTTACG
TGCCTCAGCGGTTAGACCATTGACCCCGCGTCCTCGAGAGGACGGAGCGT
TTTTCCCACAGGACCGATCACCGATGGCCAATCGTTCCTTCCTACTTTGC
CAAAGGTGGCTCAGGCATGTTTCCCCCAGCCTATCTATCCTATCGATATC
ACTTCCCGCATTTTCAACCCACTTCCTATGTCCCAGTACAGCTACCGTCT
TCTCCTGGCTATTACGTGCCTCAAACATAACCTCCTTGTACTTTTCCCAG
CTCAGTCATGTACACTTCCCTCTCCTTCTTGTACAAGTGTACAAGGGACA
TTCCGCAACTACATGAACGAACCCGGTCTTCGCACTCGGATCCGCATTCA
CGTTTGAAATTGTCGTCTTCATCGTCTATCGTTCAGCAGCTTACAGAACA
CTTTTCCTACTGTGTTCAACTTTGTGATCCCCAATAGGGGGGGGGGTCGT
GTTTCGTCGCGGGGTGTGTATATATGCGGATGTGTATGTGAGGGTGCTTC
CGGGGGAGGGGGGCTTGTCTGTGGATGGTACTCTGCTGCGTGCTTTGGCG
TCGGTCGTTGGACGAATCGATCAACCCGTTCTTCATCTCTTGCGCAACGC
AACAGCAGTACCGCAGTGCAAAAGTGTTCCGTTTCGTTTTCACGGGTCGG
CTTCAAAACTAGTCGAGTGCTCTCGTATGTGTGTTTGTTTTTGGTCGCGA
AGTGCCGAGCGCTCTGTGCGTGCCCCAGACCCCGAACACCCTCTCACCCT
TCACCTTATCCCTCCAAACCGCTACGCGACACCACGCCGATCCCTTTGCA
GTTTTGATTTCCCGCTACGACTACTCTTCTACCCCCCCCTAGAAAACGCC
GTCCTGATTGTAGCAATCCCCGTCTCGCGCCTCTCCCGCTTCCCCCCATC
TCTAGCCGGAGCTGTACGGCTCCGCGGGCAAGGGGTTGTACGACCCTCCC
TCGCTCTCACGGAGCCCCCTGTACTTTTCCATCTACGCGGAGGGCGGGCT
TACCATGAGGTGCGTGACCTCACGGGGAAAGGGGTGTCTTGACAACCGAC
CGTCTTGCAGGCCATGATTCGCAGTTGGATGATGGATGTTTCGATGCGGG
GCGGGAGGCGGGTCGAGCTCATGTGTTGCATGCCTTAGCGGTTAGACCAT
TGACCACGCGTCCTTTCCTACTTTGCCAAAGGTACGGGGCGCGGGGGAGG
GGGGGACTTCGTGGAGTTACGATACAGCTGCCGTGTGCCGCCGCGTTGAC
ACTACCGTCAACATGCACCTGTGATGGCAGCCGCGAGGAGAGCGATGTAC
TTCCTTCCGACCGTGCTCTTTTCTCGCGGATGTTTGTTCTTGCCGTCACC
CAGGTTTCTCCTCACGAAGAGGCGGCGGGCGATCGGGGGGTTGGGGGATT
GGTTGGTTGATCTCTTTGGAATTGGACGACCGGAAGCATGACATGATATA
CTAGTACCTCGAAGCTGATACAGTCTCCACCCGGAAAGTCGTGACGTGGC
AAACGATGTTTGAATGTCTATCGAAATCAAAACCTGCGTTTTCAATAATG
GTGAGGTGTTCTGCTGGCAGAAACGGCTCCCCAAACCCTTGCGAGGTGCA
AAAAGGCAGGGGAAACAGTCCCGACAGCCGGGGGATGATAAAGCAATCCA
TGAGGACACTATTATCACGAATGCAATAGACGATGACACACACACACACA
TGACACGATGCCGGCCGAACTCGCTCGGAACTGAACCGCCATCCAAAGTG
TCCCGCATGGACACACCCCCATTCAAAAGACGTGCCTGGAGCGCTGACAC
CGATTGTTTATCCCTCGAGTACAAGTGCCCTTGTAACGTTTCTCGATTTT
CCCCGTGTTGTCGCACGATTTGGCTCGGTTCGGCAGGTTCCCCCTGCGGG
TGGAGGAGGGGCAAGGGGGGGTGTTCTCCGTAGATTGGACCGCTGGGAGC
AGGCGGTATCAGGCGGACAGGGTGTTCGATGTCCTAGACGGCAGTCTCCG
CCGGCTAGAGGTGACAGAGATCGGAACGCAGGATGCCGAGGTGTTTTTGC
CCATGGAGAAGTTCTGATTTTTGGTCTGCGTGTTAGGTGGTGCATGGTTT
TGGGTCTTGTGTGTTGCTCTGTGGTGTTCGATGGAGGGAGACAGAGAGAT
AGACAAGTGGCGGGAGAAACTTTTACGTTTCCATGACAAATTGTGATAAA
AAATAAGAATAATGTACTCTACGCTCATGGAGAATTCCTGTTTGTTTTTT
TTACGAAATGCAAACAGTAGCTCTGCGGGCCGTCTTTTCGCTCGTCACGT
GTGCGTGTCGTGTGTGCACGGATAACAGATTTGTCGCAGACACGGCCGAA
TGCAAGAAAACACAAGAGAGAACATTACAACCTTGAGAATGACCGCGGAA
GTGGGAGGGAGATGTGTAGGAGAGTTTTGCTTGTTTCACGAAAACGATAA
TAATAACGTGGGAGCATTGCTTGAACCGCCCTTCCGTGGTAGGCTTTATG
GATTTTTCTCTCGATGTTGGTTGACAACCAGCCAGGCGTAGCACAGCCGT
CACAGATTGCGTCCCCGTTAGCCGTGCAGCGAAAGGAGCGCGTGTCCCGG
AACTGTTGCCCGCTCTTTGTGGTGCTGGTGGTGCTGGTGCTGGTGGTTGT
GTGGCAGAGGGAGGGCATGGGGATGGAACAAAGGTCGACAGTCGGGAGGA
AAAAGGAGTTCACGTGTTTCATCTCGTGTTTGTAGGGGCACTTGCCGGGC
AAGACCATGCTCTCGGTGACCTGTAACCTTTAAGAAGTGGTTTTTGGCCT
AGGGTGTTGTTGCTCGGGGTGTTGTCGTTGCATGAGAAAAAAACGCTTCT
CTAACCGCTTCTCGCACCCCCGTTTTTCCGGACTCTTCGACAGGCC
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:476601..483046-

>mRNA_E-siliculosus-1a_M_contig94.17441.1 ID=mRNA_E-siliculosus-1a_M_contig94.17441.1|Name=mRNA_E-siliculosus-1a_M_contig94.17441.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2862bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:476601..483046- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGCAGAAGCCAAGAGGCAGGCCGACCTTCGCCCTCCTCTGCTACTACCT
GGGAGCAGCAACTACAACAAGAACCCTCCCGACCGCGGTGTCCGGCTTCC
ATCACCCTTGCGCCGCCCGCCGCGTCCGCCGCCGCCCAGCGGGGCAGGCG
CTTAGCCCTCCCCCCCAGCAACAGTTGTCCAACCAAAAAAGGAGCCCCAG
GCCTGTGGAGGCGGCGCAACAGCAAGCCCGGGGCTGCGGGTCAAGCTTGA
TGGCCGGCGGAGGTAGCGTCGGCGGCAGCGGTAGCTCCAGGAGCGATCCC
GCTTCCCACGGTGGCGGGAGCAGGTGGAGATCTCCGGGGCAGGCGACTGC
GGCTTCCTCCTCGGTGCTGCAGTGCGCCGCTGGAGACGACGAAGACGACA
ATTACATGCAGAAGCCAAGAGGCAGGCCGACCTTCGCCCTCCTCTGCTAC
TACCTGGGAGCAGCAACTACAACAAGAACCCTCCCGACCGCGGTGTCCGG
CTTCCATCACCCTTGCGCCGCCCGCCGCGTCCGCCGCCGCCCAGCGGGGC
AGGCGCTTAGCCCTCCCCCCCAGCAACAGTTGTCCAACCAAAAAAGGAGC
CCCAGGCCTGTGGAGGCGGCGCAACAGCAAGCCCGGGGCTGCGGGTCAAG
CTTGATGGCCGGCGGAGGTAGCGTCGGCGGCAGCGGTAGCTCCAGGAGCG
ATCCCGCTTCCCACGGTGGCGGGAGCAGGTGGAGATCTCCGGGGCAGGCG
ACTGCGGCTTCCTCCTCGGTGCTGCAGTGCGCCGCTGGAGACGACGAAGA
CGACAATTACGGGAGCGCTGACTACTCCGAGTACGGCTACGAGCCGGAGT
TCGAGCTGCAGGGGGAGGAGCCGAACGCAGACGAAGAGACGCTGGCGAGG
TGGCGGTTGGAGAAGCTTCTTGCCAACGACCGGTGGCAGTTCGGCAAGTA
CGGGACGCAAAACGTGGGCAACTGGATCGGTGAGGGAGCGCTGACTACTC
CGAGTACGGCTACGAGCCGGAGTTCGAGCTGCAGGGGGAGGAGCCGAACG
CAGACGAAGAGACGCTGGCGAGGTGGCGGTTGGAGAAGCTTCTTGCCAAC
GACCGGTGGCAGTTCGGCAAGTACGGGACGCAAAACGTGGGCAACTGGAT
CGGTGACTGGCAGGAGTACGTCGCGGAAGACCTCAGCGCGGGGTCAGACC
CAGAGAGCGACATCGGGGCCATGATCGGCATCATTCCGGGAAAGAAGTTC
GTGGCCACCACCAAGATCACCCGCAGCTGGCAGGAGTACGTCGCGGAAGA
CCTCAGCGCGGGGTCAGACCCAGAGAGCGACATCGGGGCCATGATCGGCA
TCATTCCGGGAAAGAAGTTCGTGGCCACCACCAAGATCACCCGCAGGGTT
ATCGAGTCGGCGGAAGACACCAAGATATTCGAGCACGAGCAGGGGCAGGC
GACGGGGGGGGAAGGGCAGGGGGCGGTGGGATACGAATCCGAGGCGTGTC
CGCAGCCGGTGGTCGAGACCCTCTTCTCCGACTCGTTCCGAGGCGGCAAC
GGCACCCAGGGTTATCGAGTCGGCGGAAGACACCAAGATATTCGAGCACG
AGCAGGGGCAGGCGACGGGGGGGGAAGGGCAGGGGGCGGTGGGATACGAA
TCCGAGGCGTGTCCGCAGCCGGTGGTCGAGACCCTCTTCTCCGACTCGTT
CCGAGGCGGCAACGGCACCCAGGTCGTCGGAAACGCGTACACCTCGGCGG
AAACTCTGGCAGTGGCGGGGGGGGGCGCGGATGGCCCCTGGATAGAGGTA
GGCCTTCGGGTCCAGGACGTCCGAATGCGGTGCGTTTTCGAGTACGGATC
GGGAGCGGGGGGCTCCGTCGACGCAGAGGAGGGGGGAGGGGTACCGGCAC
CAGAGGCAGCAGCAGCAGCAGCAGCAGCAGGGTCGACGAGCATCCGGAGG
GTGTTTGTGGTCCGGGAGGGGCTCGACAGACTGCCGCCGGAGGACGCCGA
TAAGGAGGTCGTCGGAAACGCGTACACCTCGGCGGAAACTCTGGCAGTGG
CGGGGGGGGGCGCGGATGGCCCCTGGATAGAGGTAGGCCTTCGGGTCCAG
GACGTCCGAATGCGGTGCGTTTTCGAGTACGGATCGGGAGCGGGGGGCTC
CGTCGACGCAGAGGAGGGGGGAGGGGTACCGGCACCAGAGGCAGCAGCAG
CAGCAGCAGCAGCAGGGTCGACGAGCATCCGGAGGGTGTTTGTGGTCCGG
GAGGGGCTCGACAGACTGCCGCCGGAGGACGCCGATAAGGAGCCGGAGCT
GTACGGCTCCGCGGGCAAGGGGTTGTACGACCCTCCCTCGCTCTCACGGA
GCCCCCTGTACTTTTCCATCTACGCGGAGGGCGGGCTTACCATGAGCCGG
AGCTGTACGGCTCCGCGGGCAAGGGGTTGTACGACCCTCCCTCGCTCTCA
CGGAGCCCCCTGTACTTTTCCATCTACGCGGAGGGCGGGCTTACCATGAG
GTTCCCCCTGCGGGTGGAGGAGGGGCAAGGGGGGGTGTTCTCCGTAGATT
GGACCGCTGGGAGCAGGCGGTATCAGGCGGACAGGGTGTTCGATGTCCTA
GACGGCAGTCTCCGCCGGCTAGAGGTGACAGAGATCGGAACGCAGGATGC
CGAGGTGTTTTTGCCCATGGAGAAGTTCTGAGTTCCCCCTGCGGGTGGAG
GAGGGGCAAGGGGGGGTGTTCTCCGTAGATTGGACCGCTGGGAGCAGGCG
GTATCAGGCGGACAGGGTGTTCGATGTCCTAGACGGCAGTCTCCGCCGGC
TAGAGGTGACAGAGATCGGAACGCAGGATGCCGAGGTGTTTTTGCCCATG
GAGAAGTTCTGA
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