prot_E-siliculosus-1a_M_contig94.17433.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17433.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17433.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length512
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: D8LL22_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL22_ECTSI)

HSP 1 Score: 760 bits (1963), Expect = 1.010e-273
Identity = 408/511 (79.84%), Postives = 411/511 (80.43%), Query Frame = 0
Query:    1 MAETALSSATAAPRGFHQRTSHYNINCRTNKSEMRIEEPPSRRDKHQHGLGRAGRCPRWRHRPRGSRGATLPATGGGAFRFASPAAGATAAAVLVVTLLSCLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGRQGRLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGMASXXXXXXXXXXXXXXXXXXXXXXXFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFFLASVACGVIAAKLSLRE 511
            M ET+LSSATAAPRGFHQ TSHYNIN RTNK++MRIEEP SRRDKHQHGLGRAGRCPRWRHRP GSRGATLPATGGGA  FA P AGATAAAVLV TLLSCLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGRQGRLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRR                                                              D                            FMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFFLASVACGVIAAKLSLRE
Sbjct:    1 MVETSLSSATAAPRGFHQHTSHYNINRRTNKAKMRIEEPASRRDKHQHGLGRAGRCPRWRHRPSGSRGATLPATGGGAVWFAWPTAGATAAAVLVTTLLSCLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGRQGRLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRRPPPPTLGNQSDPAGTSSSNSGRASGTV----------------------------------DATTGQASSLGNGTGSAASEDNSSSNDNGFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFFLASVACGVIAAKLSLRE 477          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: A0A4D9CZZ7_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZZ7_9STRA)

HSP 1 Score: 160 bits (406), Expect = 9.650e-40
Identity = 120/400 (30.00%), Postives = 168/400 (42.00%), Query Frame = 0
Query:  109 LVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLH----NAMDE----------------GAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWS------NRSWLPGRQG--RLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------DGGMASXXXXXXXXXXXXXXXXXXXXXXXFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAF 459
            LV+++P  +   HV AAFGP++L  E P+ +R LV  +P D C  L     +  D                 G IAL++R  CNFT+KV  AQ A A+ V+V D+ A ++W  +M G  E T  I IP+V VSH+TG  L +       +S  PG +G  R+R ++   GH+    + +G +E L  Y+++S++LL+FSG CGL+ AL  T YQR +R RA+R LK   ++R                                                                                     G                          +   E+   CAICL+ YEDGD L  LPC+H +H +CI PWL  KS  CPMCK   F
Sbjct:   23 LVVDQPCCSKHLHVPAAFGPNILGLESPLHARQLVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGKIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLTYNSKDKGSNASTSPSAPLSRASPTSLPDRRKGLRGLWGLLSLRRVMDKQRSRIPLPLPAHPHLESLPASGLGKGRGGRFPCPLTGDGEAPTAGEVVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 422          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: W7TBK1_9STRA (Protease-associated RING/U-box zinc finger-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TBK1_9STRA)

HSP 1 Score: 153 bits (386), Expect = 1.170e-36
Identity = 116/385 (30.13%), Postives = 160/385 (41.56%), Query Frame = 0
Query:  124 AAFGPDVLSAEPPVESRPLVRAKPRDGCVPLH----NAMDE----------------GAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWS------NRSWLPGRQG--RLRASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------DGGMASXXXXXXXXXXXXXXXXXXXXXXXFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAF 459
            AAFGP++L  E P+ +R LV  +P D C  L     +  D                 G IAL++R  CNFT+KV  AQ A A+ V+V D+ A ++W  +M G  E T  I IP+V VSH+TG  L +       +S  PG +G  R+R ++   GH+    + +G +E L  Y+++S++LL+FSG CGL+ AL  T YQR +R RA+R LK   ++R                                                                                     G  S                       +   E+   CAICL+ YEDGD L  LPC+H +H +CI PWL  KS  CPMCK   F
Sbjct:   10 AAFGPNILGLESPLHARELVMVEPEDACSDLFPRRASYQDSFFSSSSPSSLSAPSLRGRIALIKRNGCNFTEKVWRAQQAEAAGVIVYDSAARERWGTIMSGVEEWTSRITIPSVFVSHSTGLSLRNAVAQSERQSSGPGFEGAARVRVTLNDTGHVRAKTKQIGPIETLATYVVVSLVLLSFSGCCGLLLALCVTCYQRAFRHRALRGLKVEKYQRKKVSQQPLLAYNSKDKGSSASTSPSALLSRASPTSLPDRRKGLRGLWGLLSLRRVINKQRSRIPLPLPAHPRLESVPASGLGKARGGRSPCPLTGDGEAPTACEGVGASKDSWSEEEEQTTCAICLDEYEDGDLLRFLPCQHRYHDKCILPWLLEKSEACPMCKRPCF 394          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: A0A7S2RLQ5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLQ5_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.730e-24
Identity = 104/392 (26.53%), Postives = 152/392 (38.78%), Query Frame = 0
Query:  108 GLVIE-EPFQAT--FDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGC-----------VPLHN-AMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDT-PATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGRQGRL---------------------RASVGAAGHIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTRAMRKLKSFTFRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGMASXXXXXXXXXXXXXXXXXXXXXXXFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKG 462
            GLV+E  P  A   F HV AAFG         V +  LV A+P+ GC            P+    +++G   L++RG CNFT KV+ AQ  GA+A ++ D  P  D+W + M    +    + IP++ VS+ TG+RLW   + + G  G +                     R SV A G+++++ + V  LE   IY+++S+ LL  S    L  ALG  WY +  R RA+  L  F +                                                                    ++                        + R  D  C+ICL+ Y  G++L  LPC H FH +CI PWL  +S  CP+CK  A   G
Sbjct:   60 GLVLELSPGAAVEQFSHVPAAFG-----LHHDVTNLRLVPAEPKHGCECASGECLGRPAPVSPFGLEDGFALLIQRGQCNFTDKVIWAQHRGAAAAIICDDQPRDDRWEVTMSSQDQTPVPVSIPSIFVSYRTGQRLWQ-AAQIHGTGGGMTQRWRLLLSGVGFTAAGMRFPRVSVNATGNVMVSMQLVRPLETFIIYVVVSLALLTLSACLWLSLALGLAWYTQLQRRRALMALHRFKY------------------------------------------------------------------DPSTTVAPPATPYTSPSASSHSEKRSPVLCR--DTTCSICLDDYASGETLRALPCGHVFHDRCITPWLERRSVDCPLCKQPALPAG 377          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: A0A1V9Y6L8_9STRA (PA domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6L8_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 5.990e-18
Identity = 67/192 (34.90%), Postives = 102/192 (53.12%), Query Frame = 0
Query:   93 VLVVTLLSCLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDT---PATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGRQGRLRASVGAAGHIVMAARPVG----ALEMLGIYLLLSVLLLA 277
            ++V++LL+ LC A   LVIE P  A   H+ A FG  V +++       +  A P   C PL N +  G IALV+RG CNF+ KVL+AQ A A AV+V D       + W + M  D  N+  + IP+V VSH +G+RL +    +      L  ++ + G I+  A P      +LE   +Y +L+++ +A
Sbjct:    5 LVVLSLLTILCSA---LVIERPCCAKLRHIHARFGRRVTNSDEYTRLE-VATAVPIQSCAPLRNDL-HGKIALVKRGGCNFSYKVLNAQRAHAKAVIVYDDYPRQRNESWAIRMVPDHTNSSSVFIPSVFVSHESGDRLLATIDIMASVNETLLVTLNSTGEILPLATPAAVYQESLETSLMYFVLAIVCIA 191          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: A0A836CGU0_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGU0_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 4.710e-12
Identity = 54/134 (40.30%), Postives = 62/134 (46.27%), Query Frame = 0
Query:  113 EPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMD-EGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTP-----------------ATDKWLMVMYGDPENTQGIDIPAVLVSHATGERL 228
            +P      HV AAFG DV      V+   L+ A P D C PL NA    G +ALV RG CNFT+KVL AQ  GA AV+V DT                      W ++M G    T  I IPAV VS  T   L
Sbjct:   15 DPAYELHWHVPAAFGSDVR-----VDKERLILASPADACTPLSNAHKLAGNVALVTRGGCNFTEKVLQAQRCGAKAVIVGDTSNDADCPCAXXXXXXXXXXXXXWAVIMSGSAAETAPITIPAVFVSAPTAALL 143          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: A0A7S3R701_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3R701_DUNTE)

HSP 1 Score: 71.6 bits (174), Expect = 1.360e-11
Identity = 26/53 (49.06%), Postives = 39/53 (73.58%), Query Frame = 0
Query:  409 DDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGK 461
            D + CA+C++ YE G+++  LPC+H+FH QC+R WLS  S LCP+CK+   G+
Sbjct:   61 DAETCAVCIQEYEPGEAIMHLPCKHAFHDQCVRSWLSTYSKLCPVCKASVTGE 113          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: A0A7X5QVG8_9GAMM (Serine protease n=4 Tax=Luteibacter TaxID=242605 RepID=A0A7X5QVG8_9GAMM)

HSP 1 Score: 77.0 bits (188), Expect = 3.290e-11
Identity = 55/141 (39.01%), Postives = 78/141 (55.32%), Query Frame = 0
Query:  119 FDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMD-EGAIALVERGTCNFTQKVLHAQLAGASAVVVTDT-PATDKWLMVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGR--QGRLRASVGAAGHIVMA 255
            +++  AAFGP   SA     +  + R  P DGC  L NA +  G +AL++RGTC+FT K L+AQ AGASAV++ +  PA     +   G P +   ++IP +LVS A G  L +N S L G   QG   +   A G ++ A
Sbjct:  261 YEYAQAAFGPVATSAN---FAGSVARGVPNDGCAALTNAAEVAGKVALIDRGTCDFTVKALNAQAAGASAVLLANNQPAA----VTPGGTPASP--VNIPVILVSQADGNTLKANLSGLTGAVAQGTGLSGTNADGVLIYA 392          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: A0A6G0WJ90_9STRA (RING-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WJ90_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.910e-11
Identity = 30/59 (50.85%), Postives = 40/59 (67.80%), Query Frame = 0
Query:  406 RREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSALCPMCKSEAFGKGGL 464
            + +D+DLC+ICLET+E    +  LPCRH FH +CI PWL  +S+ CP+CK EA     L
Sbjct:  225 KSDDEDLCSICLETFERETLVKVLPCRHEFHQECIDPWLENRSSQCPLCKREALDNASL 283          
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Match: F0W270_9STRA (T-complex protein 1 subunit alpha n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W270_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 4.540e-11
Identity = 48/133 (36.09%), Postives = 63/133 (47.37%), Query Frame = 0
Query:  109 LVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDGCVPLHNAMD-------------EGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWLMVMYGDPENTQGIDIPAVLVSHATGERL 228
            LV+  P   T  H+   F  D L    P ++  LV   P   C PL N                   IAL++RG CNF  KV+HAQ AGA AVV+ D+       ++M  D EN   + IPAV +S+  GE+L
Sbjct:  823 LVLNSPCCQTITHLTGEFTSDKLLESNPFDNYELVAVNPLIACQPLTNGYHTKNYTSNTSALFLRNKIALIQRGECNFVTKVIHAQEAGAKAVVMMDSQIRATDYIIMQRD-ENASKVHIPAVFISYKDGEKL 954          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17433.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL22_ECTSI1.010e-27379.84RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A4D9CZZ7_9STRA9.650e-4030.00RING-type domain-containing protein n=1 Tax=Nannoc... [more]
W7TBK1_9STRA1.170e-3630.13Protease-associated RING/U-box zinc finger-contain... [more]
A0A7S2RLQ5_9STRA2.730e-2426.53Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A1V9Y6L8_9STRA5.990e-1834.90PA domain-containing protein n=1 Tax=Thraustotheca... [more]
A0A836CGU0_9STRA4.710e-1240.30RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A7S3R701_DUNTE1.360e-1149.06Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A7X5QVG8_9GAMM3.290e-1139.01Serine protease n=4 Tax=Luteibacter TaxID=242605 R... [more]
A0A6G0WJ90_9STRA3.910e-1150.85RING-type domain-containing protein n=1 Tax=Aphano... [more]
F0W270_9STRA4.540e-1136.09T-complex protein 1 subunit alpha n=1 Tax=Albugo l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 413..454
e-value: 1.3E-8
score: 44.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 412..455
e-value: 1.9E-12
score: 47.3
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 413..455
score: 13.079
NoneNo IPR availableGENE3D3.50.30.30coord: 105..234
e-value: 7.3E-25
score: 89.6
NoneNo IPR availablePANTHERPTHR22765:SF247RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 136..228
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 412..460
coord: 136..228
NoneNo IPR availablePANTHERPTHR22765:SF247RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 412..460
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 265..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 242..259
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 510..511
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 260..264
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 294..486
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 487..509
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 408..458
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 160..232
NoneNo IPR availableTMHMMTMhelixcoord: 271..293
NoneNo IPR availableTMHMMTMhelixcoord: 487..509
IPR003137PA domainPFAMPF02225PAcoord: 160..228
e-value: 1.5E-11
score: 44.1
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 393..459
e-value: 2.0E-18
score: 67.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:403634..411354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17433.1mRNA_E-siliculosus-1a_M_contig94.17433.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 401794..411429 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17433.1 ID=prot_E-siliculosus-1a_M_contig94.17433.1|Name=mRNA_E-siliculosus-1a_M_contig94.17433.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=512bp
MAETALSSATAAPRGFHQRTSHYNINCRTNKSEMRIEEPPSRRDKHQHGL
GRAGRCPRWRHRPRGSRGATLPATGGGAFRFASPAAGATAAAVLVVTLLS
CLCPAAIGLVIEEPFQATFDHVAAAFGPDVLSAEPPVESRPLVRAKPRDG
CVPLHNAMDEGAIALVERGTCNFTQKVLHAQLAGASAVVVTDTPATDKWL
MVMYGDPENTQGIDIPAVLVSHATGERLWSNRSWLPGRQGRLRASVGAAG
HIVMAARPVGALEMLGIYLLLSVLLLAFSGVCGLVFALGFTWYQRGYRTR
AMRKLKSFTFRRRPPPPTLGNQSDPGGTSSSNSGRASGTADATTTGRGES
AASAAAAAAAATASQTGGDDSSSGDGGMASASSLGSGTGSAASGDNSSSN
DNGFMRREDDDLCAICLETYEDGDSLTGLPCRHSFHTQCIRPWLSGKSAL
CPMCKSEAFGKGGLFLATAPRLEAAFAELAALCTENLAVLGLFFLASVAC
GVIAAKLSLRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR003137PA_domain
IPR001841Znf_RING