|
|
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: A0A6H5JCK4_9PHAE (Telo_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK4_9PHAE) HSP 1 Score: 1574 bits (4075), Expect = 0.000e+0 Identity = 872/973 (89.62%), Postives = 886/973 (91.06%), Query Frame = 1
Query: 184 MASSAPAVARSIAEVTRESIRVEKLRGRVQTVFPIHACMTPTANNSETQDYGTVGSDGPIEGATKVFQVTLRDLSLPGNSGANGNLHHRIDVYFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASDSGDHPFCLVFHSGSDDSLLALGAVAADHLAGXXXXXXXXXXXXXXXXSCKVVRKAAQPGAGSRGGAAPTXXXXXXGRAKASYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQKCPIGGISSANGDXXXXXXXXXXXXXXXSPPSGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDWLATKSPHLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRTALGKPGWSPGNPRPPPIPAHLKVEVTENKREWEALALSPGMWIRLRRLTIVKNRATGNMSAKMIDKGSSVNPLHPSMVEVQHIAMSYATHCASASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGVCSRQMPPPRGNGASSGNGGSMAAPIXXXXXXXXXTNGDPGVSASSAAASGPSSGCDNRGRATSSSRVTGCERRSPPXXXXXXXXXXAAPRKVPTSSAQQPAPLLRQXQPGPPLRPAGVRGKRPFFDRGGASKDVLGTSNARMGVGSEG---GGHVSARGTKRALPVSEDRTETRAGAEGRPEAPEGRRMSNLEVVRSTVAPNVFDTRARIVSHWPPKVEDFVRHGPESDNDRLHFLFTLRLEDNYGVVDAIASGPDASLLLPGSPSPAEFYTSLEVRSRVERVLTRLQSTSAGKAGGGVVELRLRSYLAPLVEIRHRGDKCKRYSIIAPSCLED 3093
MASSAP VARSIAEVTRE+IRVEKLRGRVQTVFPIHACMTPTA+NSETQDYGTVGSDGPIEGATKVFQVTLRDLSLPGNSGANGNLHHRID YFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASD+GDHPFCLVFH+GSDDSLLALGA+AADHLAG SCKVVRKA QPGA SRGGAAP GRAKASYAYT LDSIRV EEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQKCPIGGISSA+G XXXXXXXXXXXXXXXSPPSGPDAGGGE DA+LPATDWEVQSSSANYTLSQVDQDRCIALSDWLA KSP LWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVR ALGKPGWSPGNPRPPPIPAHLKVEVTENKREWEALALSPGMWIRLRRLTIVKNRATGNMSAKMIDKGSSVNPLHPSMVEVQHIAMSYATHCASASSSSXXXXXXXXXXXXXXXXXXXXXXXXXX ATAGVCSRQMP PRGNGASSGN XXXXXXXXX GDPGVSASSAAASGPSSGCDNRGRATSSSRVTGCERRS P XXXX PRKVPTSSAQQ APLLR+ Q GPPLRPAGVRG+ FFDRG ASKDVLGTSNAR GVG EG GGHVS RGTKRALPVSEDRTETRAGAE RPEAPEGRRMSNLEVVRSTVAPNVFDTRARIVSHWPPKVEDFVR GPESDNDRLHFLFTLRLED+YGVVDAIASGPDASLLLPGSPSP EFYTSLEV+SRVERVLTRL+STSAGKAGGG++ELRLRSYLAPLVEIRHRGDKCKRYSIIAPSCLED
Sbjct: 1 MASSAPTVARSIAEVTREAIRVEKLRGRVQTVFPIHACMTPTASNSETQDYGTVGSDGPIEGATKVFQVTLRDLSLPGNSGANGNLHHRIDAYFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASDNGDHPFCLVFHTGSDDSLLALGAMAADHLAGVAGGGGGRNDEADDVVSCKVVRKAVQPGARSRGGAAPMGRRGGGGRAKASYAYTALDSIRVQEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQKCPIGGISSASGXXXXXXXXXXXXXXXXSPPSGPDAGGGEVDAILPATDWEVQSSSANYTLSQVDQDRCIALSDWLARKSPQLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRAALGKPGWSPGNPRPPPIPAHLKVEVTENKREWEALALSPGMWIRLRRLTIVKNRATGNMSAKMIDKGSSVNPLHPSMVEVQHIAMSYATHCASASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXKAPSPVRPPSRSAPAPATATAGVCSRQMPSPRGNGASSGNXXXXXXXXXXXXXXXXXXXGDPGVSASSAAASGPSSGCDNRGRATSSSRVTGCERRSLPSSPTAAXXXXXXPRKVPTSSAQQLAPLLRRQQQGPPLRPAGVRGRCHFFDRGDASKDVLGTSNARTGVGGEGAEVGGHVSVRGTKRALPVSEDRTETRAGAERRPEAPEGRRMSNLEVVRSTVAPNVFDTRARIVSHWPPKVEDFVRRGPESDNDRLHFLFTLRLEDDYGVVDAIASGPDASLLLPGSPSPTEFYTSLEVQSRVERVLTRLESTSAGKAGGGLIELRLRSYLAPLVEIRHRGDKCKRYSIIAPSCLED 973
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: D7FIQ5_ECTSI (POT1 protection of telomeres 1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ5_ECTSI) HSP 1 Score: 1034 bits (2673), Expect = 0.000e+0 Identity = 606/987 (61.40%), Postives = 611/987 (61.90%), Query Frame = 1
Query: 184 MASSAPAVARSIAEVTRESIRVEKLRGRVQTVFPIHACMTPTANNSETQDYGTVGSDGPIEGATK---------------VFQVTLRDLSLPGNSGANGNLHHRIDVYFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASDSGDHPFCLVFHSGSDDSLLALGAVAADHLAGXXXXXXXXXXXXXXXXSCKVVRKAAQPGAGSRGGAAPTXXXXXXGRAKASYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQKCPIGGISSANGDXXXXXXXXXXXXXXXSPPSGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDWLATKSPHLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRTALGKPGWSPGNPRPPPIPAHLKVEVTENKREWEALALSPGMWIRLRRLTIVKNRATGNMSAKMIDKGSSVNPLHPSMVEVQHIAMSYATHCASASSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGVCSRQMPPPRGNGASSGNGGSMAAPIXXXXXXXXXTNGDPGVSASSAAASGPSSGCDNRGRATSSSRVTGCERRSPPXXXXXXXXXXAAPRKVPTSSAQQPAPLLRQXQPGPPLRPAGVRGKRPFFDRGGASKDVLGTSNARMGVGSEGGGHVSARGTKRALPVSEDRTETRAGAEGRPEAPEGRRMSNLEVVRSTVAPNVFDTRARIVSHWPPKVEDFVRHGPESDNDRLHFLFTLRLEDNYGVVDAIASGPDASLLLPGSPSPAEFYTSLEVRSRVERVLTRLQSTSAGKAGGGVVELRLRSYLAPLVEIRHRGDKCKRYSIIAPSCLEDQG 3099
MASS P VARSIAEVTRESIRVEKLRGRVQTVFPIHACMTPTANNSETQDYGTVGSDGPIEGATK VFQVTLRDLSLPGNSGANGNLHHRID YFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASD+GDHPFCLVFH+G DDSLLALGAVAADHLAG SCKVVRKAAQPGAGSRGGAAPT XX RAKASYAYTTLDSIRV EEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSD AVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQKCPIGGIS A+GDXXXXXXXXXXXXXXXSPPSGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDWLATKSPHLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRTALGKPGWSPGNPRPPPIPAHLKVEVTENKRE VEDFVRHGPESDN RLHFLFTLRLED+YGVVDAIASGPDASLLLPGSPSPAEFYTSLEVRSRVERVLTRL+STS GKA GGVVELRLRSYLAPLVEIRHRGDKCKRYSIIAPSCLEDQG
Sbjct: 1 MASSTPTVARSIAEVTRESIRVEKLRGRVQTVFPIHACMTPTANNSETQDYGTVGSDGPIEGATKRSASILARDSVASAKVFQVTLRDLSLPGNSGANGNLHHRIDAYFYDKWADDHHSGIGPGDDIEVSGPAARLVHPDPSASDNGDHPFCLVFHTGRDDSLLALGAVAADHLAGVAGGSGGRSDEADDVVSCKVVRKAAQPGAGSRGGAAPTGRGGXXXRAKASYAYTTLDSIRVQEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDDAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKAMRETYQKCPIGGISPASGDXXXXXXXXXXXXXXXSPPSGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDWLATKSPHLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEKAEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRTALGKPGWSPGNPRPPPIPAHLKVEVTENKRE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VEDFVRHGPESDNYRLHFLFTLRLEDDYGVVDAIASGPDASLLLPGSPSPAEFYTSLEVRSRVERVLTRLESTSTGKARGGVVELRLRSYLAPLVEIRHRGDKCKRYSIIAPSCLEDQG 657
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: A0A0W8BHD3_PHYNI (Protection of telomeres protein 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8BHD3_PHYNI) HSP 1 Score: 74.7 bits (182), Expect = 5.310e-10 Identity = 38/110 (34.55%), Postives = 64/110 (58.18%), Query Frame = 1
Query: 811 ASYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKA 1140
++Y Y+ L + + ++YGVV + T ++ GRD +VS+ DESCP A+ N F T++ +P VGDI+R H+ K+Q+Y+ R Q L+ A ++ ++KA
Sbjct: 62 SAYRYSPLSEL--VDGFADIYGVVVNMTLPKKTSGRDFCMTVSVTDESCPTRAAAIQVNIFYPTIEKIPKIKFVGDIIRFHKVKIQQYQDRIQGLSLSRATRHLVLREKA 169
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: W2Q538_PHYPN (Telo_bind domain-containing protein n=65 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q538_PHYPN) HSP 1 Score: 74.3 bits (181), Expect = 1.070e-9 Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 1
Query: 814 SYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIRKKKA 1140
+Y Y+ L + + ++YGVV + T ++ GRD +VS+ DESCP A+ N F T++ +P VGDI+R H+ K+Q+Y+ R Q L+ A ++ ++KA
Sbjct: 210 AYRYSPLSEL--VDGFADIYGVVVNMTLPKKTSGRDFCMTVSVTDESCPTRAAAIQVNIFYPTIEKIPKIKFVGDIIRFHKVKIQQYQDRIQGLSLSRATRHLVLREKA 316
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: A0A024FXU0_9STRA (Telo_bind domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FXU0_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 5.710e-9 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 1
Query: 814 SYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLVIR 1128
+Y YT L + NV+GVV + +S G+D+ V + DESCP+ A+ F TL+ +P L VGD++R HR K+Q+Y GR Q + +LV R
Sbjct: 883 TYVYTNLSDLS--SGLANVFGVVVNMVLPRKSAGKDIHMHVHITDESCPKRQDALLVLVFYRTLEQMPRVLYVGDVIRFHRLKIQQYDGRLQGVCYHATRFLVSR 985
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: UPI001BB1852E (protection of telomeres protein 1-like n=1 Tax=Lytechinus variegatus TaxID=7654 RepID=UPI001BB1852E) HSP 1 Score: 70.9 bits (172), Expect = 1.490e-8 Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 1
Query: 802 RAKASYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLV 1122
++ +Y YT L+ I+ +VYGVV F ++++G D S++++D S P+ D + C F +K LP L GDIVRLHR ++Q+Y Q G + LV
Sbjct: 197 KSNRTYKYTCLNDIK-ETGSVDVYGVVKFFKPPYKTKGPDYCMSLTIVDPSLPEEDSGLKCVLFQQDIKKLPEVLSKGDIVRLHRLRIQKYNSDFQGAKGNGFSSLV 302
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: A0A6P7Z012_9AMPH (Protection of telomeres protein 1 n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7Z012_9AMPH) HSP 1 Score: 70.5 bits (171), Expect = 1.890e-8 Identity = 39/102 (38.24%), Postives = 57/102 (55.88%), Query Frame = 1
Query: 817 YAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLV 1122
Y+YT L+ ++ NVYG+V F ++S+G D + V+++D QSD + C FS L LP +GDIVR HR K+QE+ Q + + G A LV
Sbjct: 222 YSYTPLNHLK-GGTTVNVYGIVKFFKPPYRSKGTDYCSVVTIVD----QSDAKLTCTLFSGNLDTLPKIYKIGDIVRFHRIKIQEFNNEMQGITSAGFAALV 318
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: A0A7M7MZ44_STRPU (Protection of telomeres protein 1 n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7MZ44_STRPU) HSP 1 Score: 70.5 bits (171), Expect = 1.930e-8 Identity = 37/107 (34.58%), Postives = 60/107 (56.07%), Query Frame = 1
Query: 802 RAKASYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAGGAAWLV 1122
++K +Y Y L+ ++ +VYGVV F ++++G D S++++D S PQ + + C F +K LP +GDIVRLHR K+Q+Y + Q G + LV
Sbjct: 189 KSKRTYEYKCLNDVK-EARSVDVYGVVKFFKPPYKTKGPDYCMSLTIVDPSLPQDNFGLKCVIFHQDIKKLPQVHSIGDIVRLHRLKIQQYNNQLQGAKGDGFSSLV 294
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: A0A6A3ZSE3_9STRA (Telo_bind domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZSE3_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 2.860e-8 Identity = 38/107 (35.51%), Postives = 63/107 (58.88%), Query Frame = 1
Query: 817 YAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLAAG-GAAWLVIRKK 1134
Y Y++L + + ++YGVV + T ++ GRD +VS+ DESCP A+ N F T+ +P VGDI+R H+ K+Q+Y+ + Q L+ G+ LV+R++
Sbjct: 195 YRYSSLAEL--VDGNADIYGVVVNVTLPKKTSGRDFCMTVSVTDESCPTRAEAIQINIFYPTVAQMPKIKYVGDIIRFHKIKIQQYQDKIQGLSLPRGSRHLVLREQ 299
BLAST of mRNA_E-siliculosus-1a_M_contig94.17417.1 vs. uniprot
Match: A0A329T5R6_9STRA (Telo_bind domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T5R6_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 1.020e-7 Identity = 33/95 (34.74%), Postives = 55/95 (57.89%), Query Frame = 1
Query: 814 SYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNSVSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGRPQLLA 1098
+Y Y+ L + + ++YGV+ + T ++ GRD +VS+ DESCP A+ N F ++ +P VGDI+R H+ K+Q+Y+ R Q L+
Sbjct: 128 AYRYSPLSEL--VDGYADIYGVIINVTLPKKTSGRDFCMTVSVTDESCPTRAAAIQINIFYPSIAKMPKIKYVGDIIRFHKVKIQQYQDRIQGLS 220
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 2919 |
| Model size | 3658 |
| Exons | 9 |
| Ec32 ortholog | Ec-27_000660.1 |
| Ec32 ortholog description | POT1 protection of telomeres 1 homolog |
| Hectar predicted targeting category | other localisation |
| BRITE | ko00000,ko00002,ko02000,ko03032,ko04131,ko04812 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | S |
| EggNOG OGs | KOG4757@1,KOG4757@2759 |
| EggNOG free text desc. | positive regulation of DNA strand elongation |
| GOs | GO:0000217,GO:0000228,GO:0000723,GO:0000781,GO:0000782,GO:0000783,GO:0000784,GO:0000785,GO:0000790,GO:0000792,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003697,GO:0003723,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005720,GO:0005724,GO:0006139,GO:0006259,GO:0006278,GO:0006725,GO:0006807,GO:0006996,GO:0007004,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010521,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010638,GO:0010639,GO:0010833,GO:0016043,GO:0016233,GO:0017151,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0030234,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031933,GO:0031974,GO:0031981,GO:0032200,GO:0032202,GO:0032204,GO:0032205,GO:0032206,GO:0032210,GO:0032211,GO:0032212,GO:0032356,GO:0032357,GO:0032392,GO:0032508,GO:0032991,GO:0032993,GO:0033036,GO:0033043,GO:0033044,GO:0033365,GO:0034502,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0042162,GO:0042592,GO:0043047,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0045184,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051053,GO:0051054,GO:0051095,GO:0051096,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051276,GO:0051336,GO:0051338,GO:0051345,GO:0051347,GO:0051348,GO:0051641,GO:0051972,GO:0051973,GO:0051974,GO:0060249,GO:0060255,GO:0060382,GO:0060383,GO:0061820,GO:0061821,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070187,GO:0070198,GO:0070199,GO:0070200,GO:0070727,GO:0071103,GO:0071704,GO:0071840,GO:0071897,GO:0072594,GO:0080090,GO:0090304,GO:0090657,GO:0097159,GO:0098505,GO:0098687,GO:0098772,GO:0098847,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1904356,GO:1904357,GO:1904358,GO:1905462,GO:1905464,GO:1905773,GO:1905774,GO:1905776,GO:1990955,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2000573,GO:2001251,GO:2001252 |
| KEGG Module | M00424 |
| KEGG TC | 1.A.75.1 |
| KEGG ko | ko:K10406,ko:K11109,ko:K22128 |
| Preferred name | POT1 |
| Seed eggNOG ortholog | 2880.D7FIQ5 |
| Seed ortholog evalue | 1.1e-298 |
| Seed ortholog score | 1032.7 |
| Taxonomic scope | Eukaryota |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936495.696295-UTR-E-siliculosus-1a_M_contig94:227328..227884 | 1622936495.696295-UTR-E-siliculosus-1a_M_contig94:227328..227884 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 227329..227884 - |
| 1696251104.609032-UTR-E-siliculosus-1a_M_contig94:227328..227884 | 1696251104.609032-UTR-E-siliculosus-1a_M_contig94:227328..227884 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 227329..227884 - |
| 1622936495.8775601-UTR-E-siliculosus-1a_M_contig94:238479..238662 | 1622936495.8775601-UTR-E-siliculosus-1a_M_contig94:238479..238662 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 238480..238662 - |
| 1696251104.7242055-UTR-E-siliculosus-1a_M_contig94:238479..238662 | 1696251104.7242055-UTR-E-siliculosus-1a_M_contig94:238479..238662 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | UTR | E-siliculosus-1a_M_contig94 238480..238662 - |
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17417.1 >prot_E-siliculosus-1a_M_contig94.17417.1 ID=prot_E-siliculosus-1a_M_contig94.17417.1|Name=mRNA_E-siliculosus-1a_M_contig94.17417.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=973bp
MASSAPAVARSIAEVTRESIRVEKLRGRVQTVFPIHACMTPTANNSETQD
YGTVGSDGPIEGATKVFQVTLRDLSLPGNSGANGNLHHRIDVYFYDKWAD
DHHSGIGPGDDIEVSGPAARLVHPDPSASDSGDHPFCLVFHSGSDDSLLA
LGAVAADHLAGGSGGGGGRSDEADDVVSCKVVRKAAQPGAGSRGGAAPTG
RRGGGGRAKASYAYTTLDSIRVPEEKTNVYGVVCSFTHRHQSRGRDLTNS
VSLLDESCPQSDGAVPCNFFSSTLKGLPAPLMVGDIVRLHRAKVQEYRGR
PQLLAAGGAAWLVIRKKKAMRETYQKCPIGGISSANGDGDGGVDDEDPDP
DDDSPPSGPDAGGGEADAVLPATDWEVQSSSANYTLSQVDQDRCIALSDW
LATKSPHLWLKSSSEVKVWVQDIFRRPQSGDVISKLEVDLVCCLTSKHEK
AEGGAGSLSEVYVADGTGFASSMPGKEWDDRRDAALLKGVRTALGKPGWS
PGNPRPPPIPAHLKVEVTENKREWEALALSPGMWIRLRRLTIVKNRATGN
MSAKMIDKGSSVNPLHPSMVEVQHIAMSYATHCASASSSSSTSGSEGRTG
NGGETNTGGSTGSGARKAPSPVRPPPRSAPAPATATAGVCSRQMPPPRGN
GASSGNGGSMAAPIPASRGEGLSTNGDPGVSASSAAASGPSSGCDNRGRA
TSSSRVTGCERRSPPPSPTAAAAAGAAPRKVPTSSAQQPAPLLRQQQPGP
PLRPAGVRGKRPFFDRGGASKDVLGTSNARMGVGSEGGGHVSARGTKRAL
PVSEDRTETRAGAEGRPEAPEGRRMSNLEVVRSTVAPNVFDTRARIVSHW
PPKVEDFVRHGPESDNDRLHFLFTLRLEDNYGVVDAIASGPDASLLLPGS
PSPAEFYTSLEVRSRVERVLTRLQSTSAGKAGGGVVELRLRSYLAPLVEI
RHRGDKCKRYSIIAPSCLEDQG* back to topmRNA from alignment at E-siliculosus-1a_M_contig94:227329..238662- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig94.17417.1 ID=mRNA_E-siliculosus-1a_M_contig94.17417.1|Name=mRNA_E-siliculosus-1a_M_contig94.17417.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=11334bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:227329..238662- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTTGCATGGTCACGATCTTGTAGTGATTCGCTCACCATCACAACGAGAAG
CAGGACGAGAGCCGTGGGAGAGCAAAAAAACATTTAATACCCAAACAGCC
AGTTTCCAGCTTGCTGCAGCAGGCCCGCTACAACAGCACAGCAAGCCACC
TGTTCTTTACAGCTGTGGTAGCCCACGAGGGTCATGGCTTCTTCGGCTCC
CGCGGTAGCCCGATCCATTGCCGAGGTGACTCGGGAGTCGATTCGGGTGG
AGAAGCTGCGAGGAAGGGTGCAGACGGTATTTCCGATACACGCATGCATG
ACGCCAACGGCGAACAACAGCGAGACGCAGGACTACGGGACTGTGGGCAG
CGACGGTCCGATTGAGGGGGCTACGAAAGTGAGCGATGAGGAAACACGGG
GCTGTGTCTGTGTCATCAATCAAGACGTTTTGTCTCTCTCGAATAAGGGG
TTCGTTTTGCATTATGAGCCCGTGTATCTGACCCTGTTGCCCCTCGGGCT
CTTCGCCCGTTTCTTTTTTCGTCTCACTTGTCAACCATTGTTGCGAAGCG
TCGATGGCCATGGGTAGTCTAACCCCAACAGCCGCACAGCCGTGCCTTGT
ATTCTCCAGAGAAGCTCCGATCCAGGGTCACACTGCAGAATTCTTCTACG
GTCCATTCTTGATTTTTTAACGCATGTACAACGGGTATCAGTGTTTTTTG
GAACGGAGGGGGGATGTCCAGCGGTACGTTTTTGCTCACTATTTAAGGTT
GGCTCGCCGGACGTACTGTTGAAGCACTTGTAGCAGGAGCTACTGCTGTA
TTTTCAGCAGTATAGCGCGCTAATCGCTCTGACGGTGGGGTCTAGGCGGT
CAGAACGAATGTTCACCCTTCTATTGTTTGGGAAAACGGGGAGGGGGCAC
CGATCATCAGAGAGCCCGCGCGGATACGGCATGCACCGTTGACAACCGCT
ACTGCTATTTTGGGGATGCAAGCTCGACTGGTGCCGAGAGTTCAATGAAA
ACGTCACACGTGTCAAAGTTGATATTGTGTCATGGGGTCGTGTGAATGTC
ACGTCAGATTGTCTCGTTGGTTGGCACGCCAGGTGACCTATCGGAGATCT
ACCTTCGGAGTGTTGCCACAGATTAGTAGGAGTCAGTGGACACCCTAAAG
TCGCTTACAAGTAAAGCGGGCCAGCTCCCCCCTTCCTCACGGCCTTATCT
TATGTCACGAGAGGTTGGACCTGGTTTGCTCTCCACACCGCACATTCCGT
TAGAAACTTGGGACGCAACTCAAAAAACCTGGATAACACCGTCTCGTGTT
GGTGTCAACGACGGTGCTTTGCCCGACCCAGACTTGTCTTGCGACGAGTG
TGGACATCCTCTCATTTTTGTGGGGCTTGTGGCCCGCCCTCATTGAGGCC
ATGCCCAAGAAAGCAAAGAAAACTGTTGTCCCTGGAGTCGAGGCCGACGC
CGATATCCAATTCGGTGCTGGATTGTGACCCTAGTGAATAAGGGCACCAA
GCAACGACAAACGTCTTCACGATGGGGAGGAGTGGGTGTCCTAGTGAGTC
ATGGGGCATTTTCAATTTAGCACTACAAAGTCCATGCTGCTATGTATGCA
CTGGAGAAATCAGATGCAACCCAAAGTGGTACGATCTAGAGCAGAAGGAG
GAACCCTCAAAAGGAATTTTTCGGAATGGCCACGGTGTCACGCCACAAAC
TGGCTGTATTGAATTGGATGCGAACAGACACCGACGAACAAGCGTTGGTT
TATCGCGAACGGGTCGCTCCAGCTATCTACATATCGACGGCATGCTGCTG
TAGAAGAATGCTGCCCGCCCTTCAACGTACAAGTGCAGGCCGGGCCGGGT
CCCTTCCGACGCCCTTGCAGCAGTTCGGCCTGGACCTTGGCCAAGACGAC
GCTTGAGCGACAGCGTCCCCTTGGCCAAGGTTCATGCCGAACTCGATTGC
GAGAGCATTCGCTCAGGCCCAACCTGCACCTGCACGTTGTAGTGCTGGCA
GAATTGGTTCCAAAGCTGCATGCCATGGATATAGATGTGGCTGGGGCGTC
TTCAATATGCATAAGGAAGTCCATACGGCTCATGAGAAATCAGATGCAAA
CGATCAAGAGCAGGAGGAGGAAGGACCACAACAGGTCCAAGTCCATCTCG
ACGGCATGCTGCTGGAAACGAACCGTGCCCGCACTGCAACGTGCGGGTGC
AGGCCGGGCCCCGTGCCAACGCCCTCGCGGCAGAGTTCTCCCTGGACCTT
GGACAAGGCGACGCGGTCGTCGCCTTGTCCAACGTCCAGGCGGAACCCGG
TTGCGAGAGCGTTCGCGAGAGGCCCGACCTGAACCTGGTCATTGCAGTGC
GGGCAGGATTCTTTCCGCAGCAACCAACATGCCCTCAATTTTGATGTGGC
TAGGGTTCGGGCGGTCCGCGGAGAACAATAACGATGGTTAGTGTCGGTGT
CTCCAATGGAATACAATCAGCTCGCGGCGTAACACCGTGGCCCTTGCGAA
GAATTCCTCTGGGGGCTCTTCCTCTTGCTGCTGTATATCTTTCATCTGAT
TCTCAGTAGAAGCAGGGACTTCGTATTGCTTACAAGGTCGCCCTTCGGAA
CGTGGGCGTCAAGCCTTCCGCGGGTGACGCAAGAGGACATGCCCGAAAAG
GGTTGTGTGTCATATTTATGGGACAATTTAGCGCTTGTATTCCGTACAAA
ACAACGCGCACGTTTTTTGGAGCTTGGTCGAGCCGATAACTTACCAGCGT
ACAATTGAGCCAGATGCTGGTTCGGTTCGGCGAGTTTTCTCTTGCGATCA
CAGATTTCCCTTGAAAGCCGAAGTTTAATCCGAAGCAACAGAACGAGCGG
AGGCGAGAGCGCGCTCCCAAGAAAAACACGATCAACACTGTTGGGGCATG
CGCTCAGAGTTGTCTTCAACAGGAATGTATCGCTACAGTACGTCCATCAC
TGACTCGCCATCCTGAAAGAGTTGATCGTTGCTTGGTGCTCTTCTACAGC
AGTAGGGTCATATTACGTCATCGAATCGTCATTGGCGTCGGCGTCGACTC
CCGGAGAAAAATGCGTTTTGCCTTTCTGGGGCATGGCCTCGATGAGGGCG
GGCCACAACCCCCCAAAAATTGAGATGATGTCCACACTCGTCGCAAGACA
AGTTTGGGCCGCACATCGCACTGTCGCTGACGCCACTGTAAGACAAATGT
ATAGAGGTTCGCGTTGAGTGGTGTGGAAAGCGCACCAGGTTCAACTTCTC
GTGAGAGAGGGAGTGTACGTTAAGGTTGGTTGTCTGGAAATCACCTCAGA
TTGTCTCGAAGATTGGCACGTCAGGTGAACTGTCAGAAATCTACCTTCGG
AGTGTTGCCACAGAGTAGAGTCAGTGGACGAGCTGAATCCGCGTACAAGT
ACAGCGAGCCAGCTGCCCCCTCGCTGTCACAACCAACCTTATATCGTACA
TCTGTTCTCCCTCTCTCACGAGAGGTTGAACTCCACACTACGCAATCCCA
TAACATTTTGAGCCGCATCTCGAACCTTGAGACTACCATCTCGTATACGG
AAATGACGGGTGGTGCCCGAAAAAGACCCCATGTTCACCACGTGGCAGAT
AGAGTAGTCATCCCACTCGCAAAGTTATCCGCCAATCGCACCACAGCACG
GTGGTATCGCCTTGTATGGCACCTCCAGCTCAAAACAAGCAAAGAGATTG
TGTAGCTGCTGCGAAGATCAAGTCAAGGTCACGTACAGACGTTTTTCAAG
TCCTCTCTCTGCTGCGAGGTCGTGTTCCCAAGATCTCCACACAATTACGA
GTACAATAATGGCCTGTTGTACCACCTCTCTCCCCTCGACCAAACATGAA
CGGCAGCACTAGCAGCACCAGCCGCGTCTCTGTTCTCAACCTCCACCCCA
ACCCGTCCCCCCCTCATCACTACACCGAATCATCACTCCTGGCACCCGAT
CTCCCCCTTCTCCAACCTTGTATGCCCCCGTCCTCAGGTGTTCCAAGTGA
CCCTCCGAGACCTCAGCCTACCGGGCAACAGTGGCGCCAACGGTAATCTC
CACCACCGCATTGATGTCTACTTCTACGACAAGTGGGCGGACGACCACCA
CTCCGGCATCGGCCCTGGCGATGACATAGAGGTGACCCGTGCCTTCAAGG
CCGATTTAGTAAACTTGTCGCCCCACTCTCTTACGTGTTTTTGTCCGCTG
AGTGTGGCAAAAGGAAATGCTTCTGCTACGTAGGCATCTGCGAGAGCACG
CTTCCATGTTCACCACGGGTGTCGTCTTCCAGCTTGCATTGTTAGACAAC
GATCGCTGGTACAGGGTGTATCTTGCAATCAAGCACCTGTAAACCATACC
CCGAGACACCCACACCCGTGCTGGTGTTACAGTCTATGCAGGCATGGCGG
CGGTGCTGATGACCCCCCCTCACACGCAAAGTGAACACCTGTTCCACCTA
CACTGTTGACTTTGCCATCTCGGGGCTGTTTACGTACCGCCTCCCCTCTG
AAACCTGTCACGGTACACCACGACTCTCGATCTCAGGTCTCCGGCCCAGC
CGCCAGACTCGTTCACCCGGACCCTTCCGCTTCCGACAGCGGGGACCACC
CCTTTTGCCTGGTGTTTCACTCCGGAAGCGACGACTCCTTGCTGGCGCTG
GGCGCGGTCGCGGCGGACCACCTCGCCGGCGGTTCGGGGGGCGGTGGAGG
AAGAAGCGACGAAGCGGACGACGTCGTTTCTTGCAAGGTCGTTCGAAAGG
CGGCGCAACCGGGGGCGGGGTCTAGGGGTGGGGCCGCGCCGACGGGGAGG
AGAGGGGGCGGGGGAAGAGGTCAGTCGAGAGCGGTGGTGGTGGTGCTGTT
TCGGTCGCGGTTGAGTCGGGAGATTGTTTGGCGCAACGGTGTTATGTGGA
TGTGTAGCGGTGTATTTCGTAGGTATCACGGTTGAGCCTGGAGGACTCAA
GCGTGAAGGAACTGAAAAGATCCACGACCCAACGGCGCGACCCTTGCATT
TTCGTAGTATGTGAAACCCTAACCCTATTATATTAGGCGAGAGCTTGACA
CTTTGAGACTTTGGCGAACAACCTGCATTCATTTGGGATTGGTGAGAGTT
TCACAAGGGAGGGTAATGGTGCCGAATTTCGGTTGAGATTATCTAGCTAC
GTCATGTGTGTTTTTCTCTCCTACAGCCGCGGGACGCTTCGGTGGACACC
ATACTATTTTGTATTTCTTTTTCCTGCGAACAGATGCCTGCATGCTAGTT
CCGCACCCGTTCCTCCTTGTCTTTTTCTCTGCGACTGAGCCCGGCGTAAA
CAAGGACGTGGCCAGCCTGCTCGTTCAGCAAGAGGTGGCACACGAATTGT
ACGACGCCGTTGGTTGCTCCCTGAAGCTGTTATCTCCCTCACCCCCCCGT
ACACACCGTAGCCGCACTTTAAATATCGACACGTTGCACATCTTCTGTTC
GTACCGCCGACCCGGCCTGCCTGCTCTCCGTGCCACCCTACTCCCGCAGC
CAAGGCGTCGTACGCATACACTACTCTCGATAGCATCCGCGTGCCGGAAG
AGAAGACGAACGTGTACGGCGTGGTTTGCTCCTTCACCCACCGTCACCAG
TCCAGGGGAAGGGACCTGACGAACTCGGTGAGCCTGCTGGACGAGTCTTG
CCCCCAGTCCGACGGCGCTGTGCCGTGCAACTTCTTCAGCTCGACTCTCA
AGGGGCTGCCCGCGCCGCTGATGGTCGGCGACATCGTCAGGCTCCACCGC
GCCAAGGTAAAGCGAGTGAGGCGACTGCGCAACGGCTGATATTTGGTGGC
CGGGAGAAGTGATTGTTGTCCTCGTTGCCTCTTGGTGGTGGTGCTGCTGC
AGCAGCTGTATCTGCTGTCTCAAGTGTTCCGTTGGCATGCATGCAGCGCC
GACAATCAGGTCGTCTAAAGGATACAACTGCCGCTGAATATGCCCTTTTG
ATACATTACCACCTGAATAATCGTTTCCTGCACCTGTCCCTCAGACCCAT
ATTTATGGGAACGAAATCTTGTCGATAAATCTTGATCTTGGCCAAGATCT
GCCAGTTTCACGATTTATGGGAGCAAAATCTTCCGATATATCTTGGCCAA
GATTTCTCGAGGCCCGAAATCTGCCCTTTCGAACAAATCTTGCCCCAAGA
TCTGTCGAAACGAGCCTTCCGACAAATCTTGAGGCGGCGTAACAAATCTT
GCCTGGGTGCGGCGCGATCACCGAAGGTCAGTCGGCCTAATCCCCCATAA
CGCCATGAAATCTGCACGTGGCACACTCGCAAGGGTCTCTAACGCACCCT
GGCGTCACTGTGTCGGCGCCCGACAGCGAACGAAAACGACCAAGGCGCGC
GAAAAAAATGCTAATTTGCCCTGGCTCGTTCCACGTGCGTCATCACCAGT
CTGTCGAGGGGCCGTTCGAAGAGTACTTTATTTTGAAGTAGAAAAATAGA
GGAGGAACGTTTTGCCAACACAGCTCTGTCGTGTGCGACGCTTCTATCTC
TTCATCGAATCACCCCACACCCAATCCTTTTGCACCCGAGCCAGATCCGT
GAGTGCAGATGACAGCGCCGGAGGTTTGACCTAGGTACGCCTGCTACATA
GTGAGATACGTGCACGGGTGTCATCGGCTTCGGGTTGATGCACTTTCTTG
TCAGTTAGACAGCAATCGAACAATTTTGTTTCTCCGCTCGACATGAGCTC
GTGGGCAACGGCTTCTATTTTGCACCCCAGGTAGGCGCCCATCGCTAGTA
TCCACCGACAGTGTTGAAGCAATACAGCTGGGGGAGGGACGCTCCTTCTA
CAACTGCGTCATGGTCACTTTTCGCCACACCTTGGCATTTTCTGTGGTCC
AAGTGGCCGTTGTGTCTTTATCAACTTCAAGCAGGAGAGAGGGACAACCC
GCCGCTTTTTCAACATTCGACATATTTCCCCCATAAATCGCGATACTGCA
AATCTTGGTAGAGATATATTGTGAGCAAATCTTGGGTCAAGATGCCAAGA
TATATTTTTGCAAGATTATGTTTCCATAAAGAAGGGTCTCACTGGAACGT
GCTTGCGCAAACACAAAACGAACTGACATGCTCTGCACGCGACAGGTTCA
AGAGTACCGCGGGCGACCTCAGCTCCTGGCCGCTGGAGGCGCCGCCTGGC
TCGTCATCCGCAAGAAGAAGGCCATGCGAGAGACCTATCAGAAGTGCCCT
ATCGGCGGCATCTCTTCTGCTAACGGCGACGGCGACGGTGGTGTCGATGA
CGAGGACCCTGACCCGGATGATGACTCGCCGCCTTCGGGGCCGGACGCCG
GGGGCGGCGAGGCAGATGCGGTATTGCCTGCCACGGACTGGGAGGTGCAA
TCATCCTCGGCGAACTACACGTTGTCGCAGGTGGATCAAGACAGGTGATA
TGTGCGTGCGTGGCGCTTCTGCTGCTGTTTTATGGATCTCTTTGGTCTTC
GCCAAAAGTGGTTTTCTTTTAAACTTTGTCTCCTCTACCCGTTCCTGCTG
GTATGCAGGCTTGCTGACCTTGTTTGTGCTTACTGGCCCGATGAGTGTGC
TGAGTTCGGAGAGCGCAATTTGTTATGTTTTCAGGAAGCTTTCAGCGATT
TTTTTACCTGATCGCTGGGTGTGCGTGCGATGCCGGTTGACTTGGGGACT
TTTTTCACCCTCTCGGTGAAACCATGACTATTGGCAGGTGCATCGCGCTG
AGCGATTGGCTAGCGACGAAGTCGCCGCATCTGTGGCTGAAATCGTCGTC
GGAGGTGAAAGTCTGGGTACAAGACATATTCCGCCGACCACAGTCCGGAG
ATGTGATCTCAAAGCTCGAGGTGACGACGCCAGATGTAGCAGTTGATTCA
CACTGGGCGAGATGCAAGTGTTTTACGCGGCTAGAATACGTGTGGGTTGA
TGAAAACGCGGAAGCGGTGCGAATGGACTCCGAGGCTGTACGATGCAGAC
GTCTACGTGCAAGATGTGGTTCAGCGACATCACGGACGGTCTAGACGGGT
AGCCGAGCGGCGCGATGTCATCAACTGCTTCCCGCACGTATTTGCGTAGA
TCCTCGGAGTGTCGAAAAATGGGTGAGGGTTATGGCTGTGTGGACGAAGG
GCTTGCTAGATAGAACGAGTGCGTACGATGGGAGAGCCCCTGCCTTTGCT
GTTGTGGAGAAATCCTGATGCCTCGCCGCAATTGCTGCATTTTGTAGTGC
ATCCCTGCTGGGTTTGATCTGCATCAAAGAAGCACAGCATGCCCCCACCT
TACAACAACCCCCCTCTCCGCCCACCTTCGCCGCGAAACAATGCACCCAA
ACTAAAGGTGGACCTGGTGTGCTGCTTGACTTCCAAGCATGAGAAGGCCG
AAGGCGGGGCGGGCTCCCTGTCGGAGGTCTACGTTGCCGACGGGACGGGA
TTTGCCTCCTCGATGCCTGGGAAAGAATGGGACGACCGGCGTGACGCCGC
CCTGCTCAAGGGAGTGCGTACGGCGTTGGGAAAGCCTGGCTGGTCTCCGG
GAAACCCGCGGCCTCCTCCAATCCCGGCGCACCTCAAGGTTGAGGTTACG
GAAAACAAAAGAGAGGTGTGAAGTGGAGAAGTTGGCTGTAGTCGAGAGCG
GAGATGCGGTGTTGGCGTGGTTTCGTGTGCTGTGTCTGTTAGTCAGCGCC
CGTTTCCCGCATCTTTTAAGACAATGGAACGAGTTTTTTCCAACGGTATT
GTCTTCGGATGATTTCATTTCCAGTTTGATACGCATACAATTGGTATATT
TCGCTTATTTTTCGTTTTTCAGCTGGTACTGCTTTAACGCTTAGTTCGCC
GGCGTCCAGCAGTTCTGTGATTCCCGCCTCTTTCATGGGGCGCCCCATCG
AATCAGCTTCTACTTTCTTGCCGCCTCTCACCATCAAGATTTTCTACGGT
GGTTGCCCCGTCTACACCGATACACTGTTTTATGTACTTAATCGGTCGAC
CTCACACGTATCTCTGTCCTGTGCCTCATCATGAACAACGAATAAAAAAC
AATACAGTGGGAAGCGTTGGCACTGTCGCCGGGCATGTGGATCCGTCTGC
GCCGGCTGACCATCGTGAAGAACAGAGCTACAGGAAACATGTCGGCCAAA
ATGATTGACAAGGGCTCGAGCGTCAATCCTCTGCATCCCAGCATGGTCGA
GGTTCAGCACATCGCCATGTCTTACGCAACGCACTGCGCTAGCGCTAGCA
GCAGCAGCAGTACCAGCGGCAGTGAAGGCCGCACAGGCAATGGTGGTGAG
ACCAATACGGGTGGCAGCACCGGCAGCGGCGCCAGAAAAGCGCCATCCCC
CGTGCGTCCCCCGCCGCGCTCAGCACCGGCACCAGCGACAGCGACGGCCG
GGGTATGCTCACGGCAAATGCCTCCCCCGCGCGGCAACGGCGCTTCCAGT
GGCAACGGTGGGAGTATGGCAGCCCCAATACCTGCCAGCCGGGGAGAGGG
GCTCTCGACGAACGGTGACCCCGGTGTTTCCGCCTCCAGTGCTGCCGCCT
CTGGCCCTTCCTCTGGTTGCGACAACAGGGGACGGGCGACATCTTCCTCC
CGGGTAACCGGTTGTGAGAGGCGTTCTCCTCCACCGTCCCCCACCGCCGC
TGCCGCGGCGGGGGCGGCGCCGCGGAAGGTCCCAACTTCTTCTGCCCAAC
AACCAGCGCCACTGCTGAGGCAGCAACAACCAGGGCCACCGTTGAGGCCG
GCGGGGGTTAGAGGGAAGCGTCCCTTCTTTGATCGCGGTGGTGCAAGCAA
AGATGTCCTCGGGACTAGCAATGCTCGTATGGGGGTTGGCAGCGAGGGAG
GGGGGCATGTATCGGCGCGAGGAACGAAGCGGGCCCTGCCGGTGTCAGAA
GACAGGACCGAGACAAGGGCGGGGGCTGAAGGGAGGCCGGAGGCGCCCGA
AGGTAGACGGATGTCTAACCTGGAGGTTGTCAGATCCACCGTGGCCCCGA
ATGTGTTCGATACTCGAGCCAGAATTGTCTCCCACTGGCCTCCAAAGGTA
GGCGTAGAGATGAGAGAGTGGTTTAGCATGCGTTTGCAGGTGGCGTCGCG
CATTTGTCGGTTCAGTTCGTCGCGGCAACCCTTCGTATGGTTGTGTAAGG
GTCGAGGGCCGGCGATTATTCGGAGGCTCATTGCGGCCCGGGCGAGCGGA
CGGTTCCGTTTTTTCGAATCGGAGGGATACAGTACACACCTTCGTCTGTA
GGACTCCTGCTCATCTAGACCCTCGAGGCTACATTGGTCTCTCTAAACAA
CTTTGTTCTACGCACAAAGAAACTGAAATATTATCTACGGGATGAACTGA
TCGTGGATGAGAGCGAAAGGAGAGCAATTTGTTTCTCTCCCCTACACTCC
CACCACTCCCCGCTCTCATCCCGTGTCTCATTCGTTGGTGTTTTCTCTAT
CCGACCCCTACTCGATAGGTGGAAGATTTTGTGCGGCATGGTCCAGAGTC
GGACAACGACAGACTACACTTCCTCTTCACGCTGAGACTCGAAGACAACT
ACGGGGTCGTCGATGCCATCGCATCGGGCCCCGACGCATCGCTCCTACTG
CCGGGGTCCCCGTCCCCAGCAGAGTTCTATACTAGCCTCGAGGTCCGGTC
GAGGGTGGAGCGGGTCCTGACACGTCTTCAGTCTACCAGCGCAGGCAAAG
CTGGAGGGGGCGTGGTTGAGCTGCGCCTACGCTCTTACCTGGCGCCCCTG
GTGGAAATCAGGCACAGAGGAGACAAGTGCAAGCGCTACAGCATCATCGC
CCCGTCTTGTTTGGAAGACCAAGGTTGAAAGGGGGTGTTCGCTGTCACAG
TGGCGAAATGCATCGGGTTGGTTTTGTGCCTTGCCCTTACGATTGAAGGT
GCTGTACTTTCGTCTTTTGGTGTGGTACATGCGCTTTTCGTGACGAAAGC
AGCACGTAAAAAAATTCCAAGGTTTGTTGCTATAGTTTTCTTGTGGCGTT
GAAGCCGGCGAACCTGATCCCAATGTTTCTGTTCGTGGGATAATTAATAA
TTTAGAATATCTTGTCGGGTTACATAGTGGCTCGGAAGGGTGTCGGTCGT
TTCTTATTATGGTTTATGGTTCCCAAACGAATTGACGTTATCGCATGCCA
GGCCTGGATATGTATTAAGGACAGGAAGCAGTGGTGGCCTTCCACATTCG
AGTCTGTTCACCACATAGATGTATGTCATGCGCATATGAAGGTTGCCTTG
GCTTCTTCAATATATTCTTGTACCTGCTTTCATGTGTTCTACTTCAAGGG
GAAAATTGCTCACGTGTAGGCACTTGGCTGAGTTGCTTGGGCCGTTGTGC
AGCGTGTGTTGTTAATTGGCGCGCTTCTCGTGAC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:227329..238662- >mRNA_E-siliculosus-1a_M_contig94.17417.1 ID=mRNA_E-siliculosus-1a_M_contig94.17417.1|Name=mRNA_E-siliculosus-1a_M_contig94.17417.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=5838bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:227329..238662- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCTTCTTCGGCTCCCGCGGTAGCCCGATCCATTGCCGAGGTGACTCG
GGAGTCGATTCGGGTGGAGAAGCTGCGAGGAAGGGTGCAGACGGTATTTC
CGATACACGCATGCATGACGCCAACGGCGAACAACAGCGAGACGCAGGAC
TACGGGACTGTGGGCAGCGACGGTCCGATTGAGGGGGCTACGAAAATGGC
TTCTTCGGCTCCCGCGGTAGCCCGATCCATTGCCGAGGTGACTCGGGAGT
CGATTCGGGTGGAGAAGCTGCGAGGAAGGGTGCAGACGGTATTTCCGATA
CACGCATGCATGACGCCAACGGCGAACAACAGCGAGACGCAGGACTACGG
GACTGTGGGCAGCGACGGTCCGATTGAGGGGGCTACGAAAGTGTTCCAAG
TGACCCTCCGAGACCTCAGCCTACCGGGCAACAGTGGCGCCAACGGTAAT
CTCCACCACCGCATTGATGTCTACTTCTACGACAAGTGGGCGGACGACCA
CCACTCCGGCATCGGCCCTGGCGATGACATAGAGGTGTTCCAAGTGACCC
TCCGAGACCTCAGCCTACCGGGCAACAGTGGCGCCAACGGTAATCTCCAC
CACCGCATTGATGTCTACTTCTACGACAAGTGGGCGGACGACCACCACTC
CGGCATCGGCCCTGGCGATGACATAGAGGTCTCCGGCCCAGCCGCCAGAC
TCGTTCACCCGGACCCTTCCGCTTCCGACAGCGGGGACCACCCCTTTTGC
CTGGTGTTTCACTCCGGAAGCGACGACTCCTTGCTGGCGCTGGGCGCGGT
CGCGGCGGACCACCTCGCCGGCGGTTCGGGGGGCGGTGGAGGAAGAAGCG
ACGAAGCGGACGACGTCGTTTCTTGCAAGGTCGTTCGAAAGGCGGCGCAA
CCGGGGGCGGGGTCTAGGGGTGGGGCCGCGCCGACGGGGAGGAGAGGGGG
CGGGGGAAGAGGTCTCCGGCCCAGCCGCCAGACTCGTTCACCCGGACCCT
TCCGCTTCCGACAGCGGGGACCACCCCTTTTGCCTGGTGTTTCACTCCGG
AAGCGACGACTCCTTGCTGGCGCTGGGCGCGGTCGCGGCGGACCACCTCG
CCGGCGGTTCGGGGGGCGGTGGAGGAAGAAGCGACGAAGCGGACGACGTC
GTTTCTTGCAAGGTCGTTCGAAAGGCGGCGCAACCGGGGGCGGGGTCTAG
GGGTGGGGCCGCGCCGACGGGGAGGAGAGGGGGCGGGGGAAGAGCCAAGG
CGTCGTACGCATACACTACTCTCGATAGCATCCGCGTGCCGGAAGAGAAG
ACGAACGTGTACGGCGTGGTTTGCTCCTTCACCCACCGTCACCAGTCCAG
GGGAAGGGACCTGACGAACTCGGTGAGCCTGCTGGACGAGTCTTGCCCCC
AGTCCGACGGCGCTGTGCCGTGCAACTTCTTCAGCTCGACTCTCAAGGGG
CTGCCCGCGCCGCTGATGGTCGGCGACATCGTCAGGCTCCACCGCGCCAA
GCCAAGGCGTCGTACGCATACACTACTCTCGATAGCATCCGCGTGCCGGA
AGAGAAGACGAACGTGTACGGCGTGGTTTGCTCCTTCACCCACCGTCACC
AGTCCAGGGGAAGGGACCTGACGAACTCGGTGAGCCTGCTGGACGAGTCT
TGCCCCCAGTCCGACGGCGCTGTGCCGTGCAACTTCTTCAGCTCGACTCT
CAAGGGGCTGCCCGCGCCGCTGATGGTCGGCGACATCGTCAGGCTCCACC
GCGCCAAGGTTCAAGAGTACCGCGGGCGACCTCAGCTCCTGGCCGCTGGA
GGCGCCGCCTGGCTCGTCATCCGCAAGAAGAAGGCCATGCGAGAGACCTA
TCAGAAGTGCCCTATCGGCGGCATCTCTTCTGCTAACGGCGACGGCGACG
GTGGTGTCGATGACGAGGACCCTGACCCGGATGATGACTCGCCGCCTTCG
GGGCCGGACGCCGGGGGCGGCGAGGCAGATGCGGTATTGCCTGCCACGGA
CTGGGAGGTGCAATCATCCTCGGCGAACTACACGTTGTCGCAGGTGGATC
AAGACAGGTTCAAGAGTACCGCGGGCGACCTCAGCTCCTGGCCGCTGGAG
GCGCCGCCTGGCTCGTCATCCGCAAGAAGAAGGCCATGCGAGAGACCTAT
CAGAAGTGCCCTATCGGCGGCATCTCTTCTGCTAACGGCGACGGCGACGG
TGGTGTCGATGACGAGGACCCTGACCCGGATGATGACTCGCCGCCTTCGG
GGCCGGACGCCGGGGGCGGCGAGGCAGATGCGGTATTGCCTGCCACGGAC
TGGGAGGTGCAATCATCCTCGGCGAACTACACGTTGTCGCAGGTGGATCA
AGACAGGTGCATCGCGCTGAGCGATTGGCTAGCGACGAAGTCGCCGCATC
TGTGGCTGAAATCGTCGTCGGAGGTGAAAGTCTGGGTACAAGACATATTC
CGCCGACCACAGTCCGGAGATGTGATCTCAAAGCTCGAGGTGCATCGCGC
TGAGCGATTGGCTAGCGACGAAGTCGCCGCATCTGTGGCTGAAATCGTCG
TCGGAGGTGAAAGTCTGGGTACAAGACATATTCCGCCGACCACAGTCCGG
AGATGTGATCTCAAAGCTCGAGGTGGACCTGGTGTGCTGCTTGACTTCCA
AGCATGAGAAGGCCGAAGGCGGGGCGGGCTCCCTGTCGGAGGTCTACGTT
GCCGACGGGACGGGATTTGCCTCCTCGATGCCTGGGAAAGAATGGGACGA
CCGGCGTGACGCCGCCCTGCTCAAGGGAGTGCGTACGGCGTTGGGAAAGC
CTGGCTGGTCTCCGGGAAACCCGCGGCCTCCTCCAATCCCGGCGCACCTC
AAGGTTGAGGTTACGGAAAACAAAAGAGAGGTGGACCTGGTGTGCTGCTT
GACTTCCAAGCATGAGAAGGCCGAAGGCGGGGCGGGCTCCCTGTCGGAGG
TCTACGTTGCCGACGGGACGGGATTTGCCTCCTCGATGCCTGGGAAAGAA
TGGGACGACCGGCGTGACGCCGCCCTGCTCAAGGGAGTGCGTACGGCGTT
GGGAAAGCCTGGCTGGTCTCCGGGAAACCCGCGGCCTCCTCCAATCCCGG
CGCACCTCAAGGTTGAGGTTACGGAAAACAAAAGAGAGTGGGAAGCGTTG
GCACTGTCGCCGGGCATGTGGATCCGTCTGCGCCGGCTGACCATCGTGAA
GAACAGAGCTACAGGAAACATGTCGGCCAAAATGATTGACAAGGGCTCGA
GCGTCAATCCTCTGCATCCCAGCATGGTCGAGGTTCAGCACATCGCCATG
TCTTACGCAACGCACTGCGCTAGCGCTAGCAGCAGCAGCAGTACCAGCGG
CAGTGAAGGCCGCACAGGCAATGGTGGTGAGACCAATACGGGTGGCAGCA
CCGGCAGCGGCGCCAGAAAAGCGCCATCCCCCGTGCGTCCCCCGCCGCGC
TCAGCACCGGCACCAGCGACAGCGACGGCCGGGGTATGCTCACGGCAAAT
GCCTCCCCCGCGCGGCAACGGCGCTTCCAGTGGCAACGGTGGGAGTATGG
CAGCCCCAATACCTGCCAGCCGGGGAGAGGGGCTCTCGACGAACGGTGAC
CCCGGTGTTTCCGCCTCCAGTGCTGCCGCCTCTGGCCCTTCCTCTGGTTG
CGACAACAGGGGACGGGCGACATCTTCCTCCCGGGTAACCGGTTGTGAGA
GGCGTTCTCCTCCACCGTCCCCCACCGCCGCTGCCGCGGCGGGGGCGGCG
CCGCGGAAGGTCCCAACTTCTTCTGCCCAACAACCAGCGCCACTGCTGAG
GCAGCAACAACCAGGGCCACCGTTGAGGCCGGCGGGGGTTAGAGGGAAGC
GTCCCTTCTTTGATCGCGGTGGTGCAAGCAAAGATGTCCTCGGGACTAGC
AATGCTCGTATGGGGGTTGGCAGCGAGGGAGGGGGGCATGTATCGGCGCG
AGGAACGAAGCGGGCCCTGCCGGTGTCAGAAGACAGGACCGAGACAAGGG
CGGGGGCTGAAGGGAGGCCGGAGGCGCCCGAAGGTAGACGGATGTCTAAC
CTGGAGGTTGTCAGATCCACCGTGGCCCCGAATGTGTTCGATACTCGAGC
CAGAATTGTCTCCCACTGGCCTCCAAAGTGGGAAGCGTTGGCACTGTCGC
CGGGCATGTGGATCCGTCTGCGCCGGCTGACCATCGTGAAGAACAGAGCT
ACAGGAAACATGTCGGCCAAAATGATTGACAAGGGCTCGAGCGTCAATCC
TCTGCATCCCAGCATGGTCGAGGTTCAGCACATCGCCATGTCTTACGCAA
CGCACTGCGCTAGCGCTAGCAGCAGCAGCAGTACCAGCGGCAGTGAAGGC
CGCACAGGCAATGGTGGTGAGACCAATACGGGTGGCAGCACCGGCAGCGG
CGCCAGAAAAGCGCCATCCCCCGTGCGTCCCCCGCCGCGCTCAGCACCGG
CACCAGCGACAGCGACGGCCGGGGTATGCTCACGGCAAATGCCTCCCCCG
CGCGGCAACGGCGCTTCCAGTGGCAACGGTGGGAGTATGGCAGCCCCAAT
ACCTGCCAGCCGGGGAGAGGGGCTCTCGACGAACGGTGACCCCGGTGTTT
CCGCCTCCAGTGCTGCCGCCTCTGGCCCTTCCTCTGGTTGCGACAACAGG
GGACGGGCGACATCTTCCTCCCGGGTAACCGGTTGTGAGAGGCGTTCTCC
TCCACCGTCCCCCACCGCCGCTGCCGCGGCGGGGGCGGCGCCGCGGAAGG
TCCCAACTTCTTCTGCCCAACAACCAGCGCCACTGCTGAGGCAGCAACAA
CCAGGGCCACCGTTGAGGCCGGCGGGGGTTAGAGGGAAGCGTCCCTTCTT
TGATCGCGGTGGTGCAAGCAAAGATGTCCTCGGGACTAGCAATGCTCGTA
TGGGGGTTGGCAGCGAGGGAGGGGGGCATGTATCGGCGCGAGGAACGAAG
CGGGCCCTGCCGGTGTCAGAAGACAGGACCGAGACAAGGGCGGGGGCTGA
AGGGAGGCCGGAGGCGCCCGAAGGTAGACGGATGTCTAACCTGGAGGTTG
TCAGATCCACCGTGGCCCCGAATGTGTTCGATACTCGAGCCAGAATTGTC
TCCCACTGGCCTCCAAAGGTGGAAGATTTTGTGCGGCATGGTCCAGAGTC
GGACAACGACAGACTACACTTCCTCTTCACGCTGAGACTCGAAGACAACT
ACGGGGTCGTCGATGCCATCGCATCGGGCCCCGACGCATCGCTCCTACTG
CCGGGGTCCCCGTCCCCAGCAGAGTTCTATACTAGCCTCGAGGTCCGGTC
GAGGGTGGAGCGGGTCCTGACACGTCTTCAGTCTACCAGCGCAGGCAAAG
CTGGAGGGGGCGTGGTTGAGCTGCGCCTACGCTCTTACCTGGCGCCCCTG
GTGGAAATCAGGCACAGAGGAGACAAGTGCAAGCGCTACAGCATCATCGC
CCCGTCTTGTTTGGAAGACCAAGGTTGAGTGGAAGATTTTGTGCGGCATG
GTCCAGAGTCGGACAACGACAGACTACACTTCCTCTTCACGCTGAGACTC
GAAGACAACTACGGGGTCGTCGATGCCATCGCATCGGGCCCCGACGCATC
GCTCCTACTGCCGGGGTCCCCGTCCCCAGCAGAGTTCTATACTAGCCTCG
AGGTCCGGTCGAGGGTGGAGCGGGTCCTGACACGTCTTCAGTCTACCAGC
GCAGGCAAAGCTGGAGGGGGCGTGGTTGAGCTGCGCCTACGCTCTTACCT
GGCGCCCCTGGTGGAAATCAGGCACAGAGGAGACAAGTGCAAGCGCTACA
GCATCATCGCCCCGTCTTGTTTGGAAGACCAAGGTTGA back to top
|