mRNA_E-siliculosus-1a_M_contig94.17414.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: A0A6H5JBX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBX7_9PHAE) HSP 1 Score: 796 bits (2057), Expect = 7.010e-278 Identity = 411/432 (95.14%), Postives = 420/432 (97.22%), Query Frame = 3
Query: 201 CAAGWLGCAEGFGLLPPVTDLLLQPRTATKTRTPLRQRQQQLGGRRSSIGVSMRGEETPCNRAGFLKNGLALLVGSVAVASASPAVAETDSDELDEETKQKITQALMEALEGMEGMELTPGGGDGVQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFIGAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAHLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEMFAEAIRLDERLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 1496
CA GWLGCAEGFGLLPP TDLLLQPR AT+T T LRQRQQQLGGRRSSIGVSMRGEETPCNRA FLKNGL+LLVGSVAVASASPAVAETDSDELDEETKQKITQALMEALEGMEG+ELTPGGG QSK+VLKASSDVLPNRSPFEMQYELFKRGMEL+D DDF+GAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQD RVY+SRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGA LIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEM+AEAIRLD+RLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI
Sbjct: 7 CAVGWLGCAEGFGLLPPATDLLLQPRIATRTTTSLRQRQQQLGGRRSSIGVSMRGEETPCNRARFLKNGLSLLVGSVAVASASPAVAETDSDELDEETKQKITQALMEALEGMEGVELTPGGG--AQSKEVLKASSDVLPNRSPFEMQYELFKRGMELQDADDFVGAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDARVYVSRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAQLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEMYAEAIRLDQRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 436
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: D7FIQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ0_ECTSI) HSP 1 Score: 585 bits (1507), Expect = 9.960e-197 Identity = 303/314 (96.50%), Postives = 306/314 (97.45%), Query Frame = 3
Query: 204 AAGWLGCAEGFGLLPPVTDLLLQPRTATKTRTPLRQRQQQLGGRRSSIGVSMRGEETPCNRAGFLKNGLALLVGSVAVASASPAVAETDSDELDEETKQKITQALMEALEGMEGMELTPGGGDGVQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFIGAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPE 1145
A GWLGCAEGFGLLPPV DLLLQPRTAT+ T LRQRQQQLGGRRSSIGVSMRGEETPCNRAGFLKNGLALLVGSVAVASASPAVAETDSDELDEETKQKITQALMEALEGMEGMELTPGGG QSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDF+GAERQWTEIIENFNSPNFRAT+PGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPE
Sbjct: 7 AVGWLGCAEGFGLLPPVADLLLQPRTATRKTTSLRQRQQQLGGRRSSIGVSMRGEETPCNRAGFLKNGLALLVGSVAVASASPAVAETDSDELDEETKQKITQALMEALEGMEGMELTPGGG--AQSKDVLKASSDVLPNRSPFEMQYELFKRGMELEDDDDFVGAERQWTEIIENFNSPNFRATNPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPE 318
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: A0A835Z1G2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1G2_9STRA) HSP 1 Score: 264 bits (675), Expect = 2.210e-75 Identity = 150/336 (44.64%), Postives = 200/336 (59.52%), Query Frame = 3
Query: 612 VLPNRSPFEMQYELFKRGMELEDDDDFIGAERQWTE------------IIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGH----------------KQKGAHLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQE--------------------------MFAEAIRLDERLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEAL 1457
LPNRSPFE+QYE+FK GMELE D+DF+ AE+QWTE IIE +P +R +S GN+ LLARA++NRG R SL + REAILDYSE++ LVP+K EFWL+RG+A+E +AD KV A + E R FYESAL+DYD A+VLDP P+VY+ RGD LL Q R+ALD Y R + L+P P+ R ALAE+Q G+ GA ++G +LH P P+MLLA A++AW GEL ES++ ++ A+ D RL+D+ +I LRWP P+SMV+ LR A + + + + L
Sbjct: 30 TLPNRSPFELQYEMFKNGMELEGDEDFVAAEKQWTEVNLLSTLHDSLQIIEELETPAWRESSTGNRYLLARAHANRGGARASLGRQREAILDYSEALTLVPDKCEFWLSRGLAYEGLADMKV-AMDGCSQEGVRVFYESALSDYDGALVLDPAKPQVYMLRGDVMALLQQHREALDTYRRGLALNPSKPDLRCCTALAEIQCGNIHLXXXXXXXXXXXXXXNMGAAMVGSILHTQPDRPDMLLAGAALAWEAGELAESEKCRTVXXXXXXXXXXXXXXXXXXXXKTLYRMAVAQDVRLLDDRFIVNALRWPAVPVSMVRVLRKAGTINRLAAVRTL 364
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: W7TS28_9STRA (Tetratricopeptide tpr_1 repeat-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS28_9STRA) HSP 1 Score: 197 bits (501), Expect = 2.210e-51 Identity = 109/272 (40.07%), Postives = 174/272 (63.97%), Query Frame = 3
Query: 612 VLPNRSPFEMQYELFKRGMELEDDDDFIGAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAHLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEMFAEAIRLDERLMDENYIWLILRWPEQPLSMVKALRSASS 1427
+ +S E+++E+ K+G++L F AE +TE+I F+S ++ + S K L+A+A+SNRGN R SL + EA+LDYS SI+L P+ E+W RG+AFE +AD +LA +++ A FYE+A+ADY+HA+V+DP++ R+Y++ GD T + AL+ Y RA+ L PM+P R KVAL E++ G+ +G +++ + R P + EMLLA+A++ W+ G VE + + EA+ D RL D++Y+ + WP L M+ LR A +
Sbjct: 129 AVVRKSVPELRFEMLKKGLDLTHAFQFEEAEDVYTELIGLFDS-DYTSLSDQEKQLVAKAFSNRGNVRCSLTRVSEALLDYSRSIELCPDTAEYWTNRGLAFEVIADA-LLATREKD---AFQFYETAIADYEHALVMDPENHRLYLNAGDVLTRTRRHDLALEYYRRALALFPMSPASRGKVALLEVENGNVGRGMYMLESINRRNPDFAEMLLASAALDWTLGRFVEGVDSYREAVSRDPRLFDDSYLKMDCHWPPTMLKMLDKLREAGT 395
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: D7FIQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIQ2_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.290e-42 Identity = 82/83 (98.80%), Postives = 82/83 (98.80%), Query Frame = 3
Query: 1248 MLLAAASVAWSDGELVESQEMFAEAIRLDERLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 1496
MLLAAASVAWSDGELVESQEMFAEAIRLD RLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI
Sbjct: 1 MLLAAASVAWSDGELVESQEMFAEAIRLDGRLMDENYIWLILRWPEQPLSMVKALRSASSAPKGSGLEALGLKTLLSMPREVI 83
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: A0A0G4F1G1_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4F1G1_VITBC) HSP 1 Score: 171 bits (434), Expect = 1.600e-42 Identity = 99/290 (34.14%), Postives = 169/290 (58.28%), Query Frame = 3
Query: 579 QSKDVLKASSDVL----PNRSP-----FEMQYELFKRGMELEDDDDFIGAERQWTEIIENFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAHLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEMFAEAIRLDERLMDENYIWLILRWPEQPLSMVKALRSA 1421
Q D K S V P SP F+ QY LFK G+E DF AE +TEII+++ +P + + + +LARAY++RGNTR+SL + +A++DYS +I+ P++ +FWL R +A E A++ + + +++ A +Y+ AL DY+HA+VL P DPR+Y + G+ TLL AL+ + +A L+P ++A++AL + Q+G ++ +I ++ R P Y EM+LA + + W+ G E ++ +++ + L+D+ ++ LRWP + ++ LR A
Sbjct: 111 QPVDTTKPSRTVELLGGPGASPGRLSEFQRQYSLFKAGLEETAKFDFKEAEGIFTEIIDSYETPKAKESERA-RFMLARAYTDRGNTRVSLGELNKALVDYSCAIEYAPDEADFWLNRAIACEQKAEQSLTS----SLQFANQWYKEALEDYEHALVLKPSDPRLYANTGEILTLLEDFDAALEKFRQASALAPSNVAYKARIALLDAQLGDVRRSHFIINDIVRRSPDYWEMVLAKSMLDWNVGRFAEGAYLYDISVQENPLLLDDRHLVRDLRWPPYFVEGLRNLRMA 395
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: A0A7S1TRX5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRX5_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.170e-30 Identity = 88/271 (32.47%), Postives = 141/271 (52.03%), Query Frame = 3
Query: 624 RSPFEMQYELFKRGMELEDDDDFIGAERQWTEIIE-NFNSPNFRATSPGNKVLLARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPM--TPEFRAKVALAELQVGHKQKGAHLIGQLLHR---YPSYPEMLLAAASVAWSDGELVESQEMFAEAIRLDERLMDENYIWLILRWPEQPLSMVKALRS 1418
RS E QYEL+ M+ E D GAE+ W+ +I+ + SP S +K +LARAYS R R L K A++D S ++ L P+ EFW RG FE A R++ A + + A+ ++SA +DYDH ++LDP + ++ GD LL AL +Y+ + +P K AL +Q G GA ++ ++L + +++LA+A+VAWS G E+ ++ A++ + L D L WP + L ++K L++
Sbjct: 82 RSADERQYELYVAAMQCESVADLEGAEKTWSRLIDASVMSP--VKVSGASKTVLARAYSGRSRVRAGLGKLPPALVDISAAVGLEPDIAEFWAQRGAVFE-AASRELHASGE--MAKAKQLFQSACSDYDHGLMLDPNNAALHERSGDVKVLLEDYVGALQSYMHGLENAPAPGNTALAVKFALVVVQTGDDAMGARILSEILEEDGGMNASEDVMLASAAVAWSAGNYAEAMTLYKAALQQNHTLADTEGAVAALGWPPRSLELLKDLKA 347
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: A0A0G4I979_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I979_9ALVE) HSP 1 Score: 103 bits (257), Expect = 9.360e-19 Identity = 61/178 (34.27%), Postives = 96/178 (53.93%), Query Frame = 3
Query: 906 GVAFEDMADRKVLARADRNVEVARTF----YESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAHLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEMFAEAIRLDERLMDENYIWLILRWPEQPLSMVKALRSASS 1427
GVA E +AD ++ R+F Y AL ++DHA+VL P D R+ ++ G+ G A D Y RA+ SP P KVAL E+Q G+ GA L+ + +++PS+ EM LA +AW++GE +E ++ A+R + RL + N++ LRWP L ++ +A +
Sbjct: 514 GVAEERVADGAEKETDTFSLPSKRSFAVQWYREALDNFDHALVLQPNDHRLCVNMGELYARTGDFATARDFYRRALLASPSDPALLGKVALTEIQTGNLPVGATLVNAVTNKWPSFWEMQLAKGVLAWNNGEFLEGMTLYKVAVRQEPRLSNLNFVKKELRWPPYMLESLQNFLNAGA 691
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Match: E1ZIJ6_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZIJ6_CHLVA) HSP 1 Score: 80.9 bits (198), Expect = 3.580e-13 Identity = 55/200 (27.50%), Postives = 91/200 (45.50%), Query Frame = 3
Query: 783 ARAYSNRGNTRLSLQKTREAILDYSESIDLVPEKGEFWLARGVAFEDMADRKVLARADRNVEVARTFYESALADYDHAVVLDPQDPRVYISRGDANTLLGQGRDALDNYIRAVNLSPMTPEFRAKVALAELQVGHKQKGAHLIGQLLHRYPSYPEMLLAAASVAWSDGELVESQEMFAEAIRLDERLMDENYIWLILRWP 1382
A +SN GN + ++A+ DYS+++ L PE + LA G + A ++SA AD D A+ LDP++ + RG+ + L AL ++ A +L+P +R + A Q G + + +Y +Y E A A+V WS G+ +++ F A+ DER + +I RWP
Sbjct: 33 ASGWSNLGNVHQQQGQAQQAVEDYSKAVALAPEVSDCVLALGDSSR-----------------ALDLWQSAAADCDRAIELDPKEYAAWFDRGNIDLRLQDYAAALTDFGTAADLAPGLGGYRLRQATLMFQQGDVDGARRTMQGVTRKYSNYAEAHAALAAVEWSRGDAERAEQQFYRAVAQDERWNNMGWILENTRWP 215 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig94.17414.1 >prot_E-siliculosus-1a_M_contig94.17414.1 ID=prot_E-siliculosus-1a_M_contig94.17414.1|Name=mRNA_E-siliculosus-1a_M_contig94.17414.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=459bp MAARRGSTRRFSSSSLLLVMMLLVIICAAGWLGCAEGFGLLPPVTDLLLQback to top mRNA from alignment at E-siliculosus-1a_M_contig94:194648..205381+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig94.17414.1 ID=mRNA_E-siliculosus-1a_M_contig94.17414.1|Name=mRNA_E-siliculosus-1a_M_contig94.17414.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=10734bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:194648..205381+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig94:194648..205381+ >mRNA_E-siliculosus-1a_M_contig94.17414.1 ID=mRNA_E-siliculosus-1a_M_contig94.17414.1|Name=mRNA_E-siliculosus-1a_M_contig94.17414.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2754bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig94:194648..205381+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |