prot_E-siliculosus-1a_M_contig94.17402.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17402.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17402.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length356
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig94.17402.1 vs. uniprot
Match: D7FIN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIN9_ECTSI)

HSP 1 Score: 476 bits (1226), Expect = 2.170e-167
Identity = 265/275 (96.36%), Postives = 269/275 (97.82%), Query Frame = 0 
Query:   81 RPRQSAWTVRGGYKHGSSATASSSGSNSSNSVGQDGFPPRGETTAVDSNMDKLAADLRATRXXXXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAASTTNGEGDTPNTAVLATLRDIFAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRLMTGPGGKLTHLLACAWLAGMAFLCAYFGRQL 355
            RPRQSAWTVRGGYKHGSSATAS+SGSNSSNSVGQDGFPPRGETTAVDSN+DKLAADLRATR  XXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAAST NGEG TPNTAVL TLRDI AGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRL+TGPGGKLTHL+ACAWLAGMAFLCAYFGRQL
Sbjct:    2 RPRQSAWTVRGGYKHGSSATASNSGSNSSNSVGQDGFPPRGETTAVDSNIDKLAADLRATRDHXXXXXXXXXXXXXXXXXXXXXKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVANRRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAASTMNGEGGTPNTAVLDTLRDIVAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDRVVLRGVRVTAWEHGAAAVWALTRLLTGPGGKLTHLVACAWLAGMAFLCAYFGRQL 276
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17402.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FIN9_ECTSI2.170e-16796.36Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 275..296
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..210
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 353..355
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 332..352
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 308..326
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 297..307
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 327..331
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 211..229
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 230..274
NoneNo IPR availableTMHMMTMhelixcoord: 332..354
NoneNo IPR availableTMHMMTMhelixcoord: 275..297
NoneNo IPR availableTMHMMTMhelixcoord: 211..230

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:109599..112718 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17402.1mRNA_E-siliculosus-1a_M_contig94.17402.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 109596..112967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17402.1 ID=prot_E-siliculosus-1a_M_contig94.17402.1|Name=mRNA_E-siliculosus-1a_M_contig94.17402.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=356bp
MHHPTAHHLTTLCDLTTHTMPPRYGNTPAKRLRFVGATLACLTLMSTGAS
VIDETYSHQHCSLQRRSRTLRSGAQAWSRTRPRQSAWTVRGGYKHGSSAT
ASSSGSNSSNSVGQDGFPPRGETTAVDSNMDKLAADLRATRDHIAADIHA
RGEAIAADLKGKQEKIVDEVLRERSPEAFGELGGHASSYDSATAGMDVAN
RRSFFLGIRRVLLLVQVVELLAACMWQAAFPFGGLAGFITAASTTNGEGD
TPNTAVLATLRDIFAGEAGDGRGPLGLALAACLAQFSVYTMLLVWFGCDR
VVLRGVRVTAWEHGAAAVWALTRLMTGPGGKLTHLLACAWLAGMAFLCAY
FGRQL*
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