prot_E-siliculosus-1a_M_contig94.17410.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig94.17410.1
Unique Nameprot_E-siliculosus-1a_M_contig94.17410.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length665
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig94.17410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 298..318
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..451
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 572..664
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 548..571
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 500..518
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 452..468
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 537..547
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 519..536
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 474..499
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 469..473
NoneNo IPR availableTMHMMTMhelixcoord: 549..571

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig94contigE-siliculosus-1a_M_contig94:154477..156780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig94.17410.1mRNA_E-siliculosus-1a_M_contig94.17410.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig94 150315..158325 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig94.17410.1 ID=prot_E-siliculosus-1a_M_contig94.17410.1|Name=mRNA_E-siliculosus-1a_M_contig94.17410.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=665bp
MSGWLGARTPSAKRDSLMEGGASSSDPSSSPDSRENMLSASKNNASNHWE
EKINAVTWEKRVCDKCKDREYGSPVRSIPFPAVEGPDAVRVNVCSHFARD
WLHGTVMSSKPNTGAKFFLDFVKEEKPAAAPATEALDVPTTETQQDEESS
VDGFVASDGIEASNDVSNEERKRQTEEDAKIKEVAGSFAGRAIWHFLHTG
VTTSLYMRGAETEPDSNPHKPGGDGDDSSFIEKLNTKFGDMIEIEPHDCA
KEGLKSEKYDIVLLKGDWELLTGDPWKYPKEKILPTSYGYGEAQREAARN
FAEKLRKEEERAVAAKHKQWTEAQRATLTAMLMYIVITEGREDLPGSFRP
APSQGGEAGGRWSWAIVMDHQIRHDEGGLERANLVIAVLDRHYLLPKIVL
TPLESYEQRWAEANLRVSTRLLQDFQDKVKGGSAYMAVDSIGEMASYSRT
EVGLLLAGLWLACAAALWKETGAGFFLLAVLSANRLEQEINFKLLAFVWK
RMFRFGRKKPTTARPAPDIRANYLMVAGFGVVEAMYDDDRIPTDVGYWSA
IILSVLVSMIAVPPLCFVWWVRKETKYNGPYPLTSPERQDWIRNSVGCFY
GSCSECIFGGAGLGYRCADQQGGRLFNWLAGCSIQNVLWTGTSTGGVHHS
NNPGMDRQEWVVVG*
back to top