prot_E-siliculosus-1a_M_contig93.17361.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig93.17361.1
Unique Nameprot_E-siliculosus-1a_M_contig93.17361.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length534
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: A0A6H5JPN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPN3_9PHAE)

HSP 1 Score: 466 bits (1200), Expect = 8.830e-157
Identity = 389/505 (77.03%), Postives = 395/505 (78.22%), Query Frame = 0
Query:    1 MSKKRERDGGGSDTFQHDN-GAESLLFEIAPPPEDRTTKRSKSIAADAPLLPQESAGSAGDGNNNEASAAEPSKCHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQAAGGGADDGDVTGGGHAAPRLTAADFKTHFGGGNPASLMSGDSESKASAGNYEGDGERGXXXXXXXXXEGRSAAAAGGATKTVGRRTSSRSTKSTKTYVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGD--VVAVEGGSSGSSKNGGXXSXXXXXXXXXXXXXXXXAFSILNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKGGSGEENXXXXXXXXXXXXXVAAAAVRSGPARRSSRSSAVSRVKYTQ 502
            MS+KRERDGG  DTFQ D+ GAESLLFEIAPPPEDRT                              S AEPSK HPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPG LGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGR VHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQ+LRGEDEQA G G DDGD TGGG AA +LTAADFKTHFGGGNPASLMSGDSESKASA          XXXXXXXXX         GATKTVGRRTSSRSTKSTKTYVEE              XXXXXXXXXXXXXXXXX DGD  VVAVEGGSSGSSK+GGXXSXXXXXXXXX       AFSILN+                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    KGGSGE  XXXXXXXXXXXXXVAAAAVRSGPARRSSRSSA SRVKYTQ
Sbjct:    1 MSRKRERDGGDGDTFQQDSSGAESLLFEIAPPPEDRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGVLGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRMVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQTLRGEDEQAPGSGGDDGDATGGGDAAQKLTAADFKTHFGGGNPASLMSGDSESKASAXXXXXXXXXXXXXXXXXXXX--XXXXXXGATKTVGRRTSSRSTKSTKTYVEEDSSDGELEDGGGSSXXXXXXXXXXXXXXXXXXDGDEDVVAVEGGSSGSSKDGGXXSXXXXXXXXXGVE----AFSILNSPATAKRKPVTVGSGKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDD--KGGSGEXXXXXXXXXXXXXXXVAAAAVRSGPARRSSRSSAASRVKYTQ 497          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: D8LST7_ECTSI (Putative type II topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LST7_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 1.810e-146
Identity = 298/363 (82.09%), Postives = 303/363 (83.47%), Query Frame = 0
Query:   35 RTTKRSK-SIAADAPLLPQESAGSAGDGNNNEASAAEPSKCHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQAAGGGADDGDVTGGGHAAPRLTAADFKTHFGGGNPASLMSGDSESKASAGNYEGDGERGXXXXXXXXXEGRSAAAAGGATKTVGRRTSSRSTKSTKTYVEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGDVVAVEGGSSGSSKNGGXXSXXXXXXXXXXXXXXXXAFSILNA 396
            +TTKRSK S AADAPLLPQESAGSAGDGNNN AS AEPSK HPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNA PANPVLY+EFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQA+GGG         G AAP+LTAADFKTHFGGGNPASLMSGDSESKASAGN  G+G   XXXXXXXXX           TKTVGRRTS        TYVEE          XXXXXXXXXXXXXXXXXX   GD DVVAVEGGSSGSSKNGGXX XXXXXXXXXXX     AFSILNA
Sbjct:   24 QTTKRSKKSSAADAPLLPQESAGSAGDGNNNAASTAEPSKYHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNATPANPVLYMEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQASGGGXXXXXXXXXGDAAPKLTAADFKTHFGGGNPASLMSGDSESKASAGNDAGNGXXXXXXXXXXXXXXXXXXXXXXXTKTVGRRTSXXXXXXXXTYVEEDSDDGELEDGXXXXXXXXXXXXXXXXXXADDGDEDVVAVEGGSSGSSKNGGXXXXXXXXXXXXXXGVE--AFSILNA 384          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: A0A453TD59_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD59_AEGTS)

HSP 1 Score: 105 bits (262), Expect = 4.280e-22
Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 0
Query:   77 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQAAGGGADDGDV 229
            AA+ PS  + +  G ++V+ + + RGR L   PG   L   + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S V FS++ WVG KE+NP E  L  P+ +Q+   + +   G GA  G+V
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGL--LAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMVLFSESWWVGTKEENPDELKLEFPKEMQNAAEDVDFKGGAGAASGEV 192          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: A0A446Z088_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446Z088_TRITD)

HSP 1 Score: 106 bits (264), Expect = 8.180e-22
Identity = 59/153 (38.56%), Postives = 89/153 (58.17%), Query Frame = 0
Query:   77 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQAAGGGADDGDV 229
            AA+ PS  + +  G ++V+ + + RGR L   PG L    G+ GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS+A WVG KE+NP E  L  P+ +Q+   + +   G GA  G+V
Sbjct:   43 AALPPSGAVVRLQGRDIVRPRGQRRGRFLFSFPGLLAPAAGA-GGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSEAWWVGTKEENPDELKLEFPKEMQNAAEDVDFKGGAGAASGEV 191          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: A0A453TDM3_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TDM3_AEGTS)

HSP 1 Score: 101 bits (252), Expect = 4.510e-21
Identity = 52/136 (38.24%), Postives = 81/136 (59.56%), Query Frame = 0
Query:   77 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSL 212
            AA+ PS  + +  G ++V+ + + RGR L   PG   L   + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS++ WVG KE+NP E  L  P+ +Q++
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGL--LAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQNV 175          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: A0A453TDL8_AEGTS (Uncharacterized protein n=5 Tax=Triticinae TaxID=1648030 RepID=A0A453TDL8_AEGTS)

HSP 1 Score: 104 bits (260), Expect = 2.160e-20
Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 0
Query:   77 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQAAGGGADDGDV 229
            AA+ PS  + +  G ++V+ + + RGR L   PG   L   + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS++ WVG KE+NP E  L  P+ +Q+   + +   G GA  G+V
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGL--LAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQNAAEDVDFKGGAGAASGEV 192          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: A0A811S6P0_9POAL (Hypothetical protein n=2 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811S6P0_9POAL)

HSP 1 Score: 104 bits (259), Expect = 2.240e-20
Identity = 54/135 (40.00%), Postives = 79/135 (58.52%), Query Frame = 0
Query:   77 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQS 211
            A +APS  + +  G +VV+   + + R L   PG   L   ++GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS+ACWVG KEDNP E  L  P+  Q+
Sbjct:   41 APLAPSGAVTRLQGRDVVRRGGQRKSRYLFSFPGL--LAPAASGGRIGELADLGTKNPVLYLEFPQGRMKLFGTHVYPKNKYLTLQMTRSAKGVV---CEDVFESLIVFSEACWVGTKEDNPEELKLEFPKEFQN 170          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: UPI001D016560 (DNA-binding protein RHL1-like isoform X1 n=4 Tax=Triticum TaxID=4564 RepID=UPI001D016560)

HSP 1 Score: 104 bits (260), Expect = 2.340e-20
Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 0
Query:   77 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQAAGGGADDGDV 229
            AA+ PS  + +  G ++V+ + + RGR L   PG   L   + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS+A WVG KE+NP E  L  P+ +Q+   + +   G GA  G++
Sbjct:   42 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGL--LAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSEAWWVGTKEENPDELKLEFPKEMQNAAEDVDFKGGAGAASGEL 189          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: A0A453TD71_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453TD71_AEGTS)

HSP 1 Score: 102 bits (255), Expect = 2.860e-20
Identity = 56/152 (36.84%), Postives = 87/152 (57.24%), Query Frame = 0
Query:   77 AAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQAAGGGADDGD 228
            AA+ PS  + +  G ++V+ + + RGR L   PG   L   + GG++G L +    NPVLY+EFP+GR+K  G  V+ K ++ TL   ++A       C DVF+S + FS++ WVG KE+NP E  L  P+ +Q+   + +   G GA  G+
Sbjct:   45 AALPPSGAVARLQGRDIVRPRGQRRGRFLFSFPGL--LAPAAAGGRVGELADLGTKNPVLYLEFPQGRMKLLGTHVYPKNKYLTLQMTRSAKGVA---CEDVFESMIVFSESWWVGTKEENPDELKLEFPKEMQNAAEDVDFKGGAGAASGE 191          
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Match: UPI0009E3B71A (DNA-binding protein RHL1 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E3B71A)

HSP 1 Score: 102 bits (254), Expect = 5.030e-20
Identity = 68/203 (33.50%), Postives = 102/203 (50.25%), Query Frame = 0
Query:   20 GAESLLFEIAPPPEDRTTKRSKSIAADAPLLPQESAGSAGDGNNNEASAAEPSKCHPAAIAPSSTLRQCDGLNVVKNKARGRGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGRTVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSEEPLPLPESLQSLRGEDEQAAGG 222
            G ++ + E+A  PE    KR +++A    +L             + A+ + P       + PS  + +  G ++VK   R + R L   PG +      +GGK+G L+N A  NPVLY+EFP+GR+K  G  V+ K ++ TL   K+A       C DVF+S + FS A W+GKKE+NP E  L  P+ L   +  D    GG
Sbjct:    2 GRKAEMVELAGDPELEEKKRLRTLAVSKKIL-----------RRSPANVSVP-------LEPSKAIVKLQGRDIVKRGQR-KSRYLFSFPGLIAP---LSGGKIGVLSNLATKNPVLYLEFPQGRMKLFGTHVYPKNKYLTLQPTKSAKGVM---CEDVFESLIVFSDAWWIGKKEENPEEYQLEYPKDLNEGKDSDYDFKGG 179          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPN3_9PHAE8.830e-15777.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LST7_ECTSI1.810e-14682.09Putative type II topoisomerase n=1 Tax=Ectocarpus ... [more]
A0A453TD59_AEGTS4.280e-2237.91Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A446Z088_TRITD8.180e-2238.56Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
A0A453TDM3_AEGTS4.510e-2138.24Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
A0A453TDL8_AEGTS2.160e-2037.25Uncharacterized protein n=5 Tax=Triticinae TaxID=1... [more]
A0A811S6P0_9POAL2.240e-2040.00Hypothetical protein n=2 Tax=Miscanthus lutariorip... [more]
UPI001D0165602.340e-2037.25DNA-binding protein RHL1-like isoform X1 n=4 Tax=T... [more]
A0A453TD71_AEGTS2.860e-2036.84Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
UPI0009E3B71A5.030e-2033.50DNA-binding protein RHL1 n=1 Tax=Phalaenopsis eque... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038859DNA-binding protein RHL1PANTHERPTHR35698FAMILY NOT NAMEDcoord: 74..335

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig93contigE-siliculosus-1a_M_contig93:411614..417650 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig93.17361.1mRNA_E-siliculosus-1a_M_contig93.17361.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig93 411063..417734 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17361.1 ID=prot_E-siliculosus-1a_M_contig93.17361.1|Name=mRNA_E-siliculosus-1a_M_contig93.17361.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=534bp
MSKKRERDGGGSDTFQHDNGAESLLFEIAPPPEDRTTKRSKSIAADAPLL
PQESAGSAGDGNNNEASAAEPSKCHPAAIAPSSTLRQCDGLNVVKNKARG
RGRQLMVLPGALGLGNGSTGGKLGTLNNAAPANPVLYVEFPEGRLKCTGR
TVHAKGRFFTLYADKAAGRATRMDCRDVFDSAVFFSKACWVGKKEDNPSE
EPLPLPESLQSLRGEDEQAAGGGADDGDVTGGGHAAPRLTAADFKTHFGG
GNPASLMSGDSESKASAGNYEGDGERGGGGSDGEEGEGRSAAAAGGATKT
VGRRTSSRSTKSTKTYVEEDSDDGEVENGGGSSSSSGDEVAGGGRGGGDD
GDGDVVAVEGGSSGSSKNGGGGSGSGSGSGSGSGAGGVEAFSILNAPATA
KRKPVTVGSGKEKKNAPASSKKKKAGAGGAKGKGRRRALASSGSSSSSSD
DDDDKGGSGEENGDSGEESPASGEDVAAAAVRSGPARRSSRSSAVSRVKY
TQSSSGSEEDDEEEEEEEGDDGDGDDDDDEFEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038859RHL1