prot_E-siliculosus-1a_M_contig93.17338.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig93.17338.1
Unique Name	prot_E-siliculosus-1a_M_contig93.17338.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	691

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Match: A0A6H5JWH9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH9_9PHAE)

HSP 1 Score: 872 bits (2252), Expect = 6.920e-312
Identity = 555/673 (82.47%), Postives = 573/673 (85.14%), Query Frame = 0

Query:   19 MPSLVKKRSHGGDAPGDQQSTLKMRRSCDACALAKRRCDGELRCSLCSKKSIRCVYSTRQKSGPKGHKAPGESVAATATTIISSPTTADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTVVPPGKSEPITPADLAPSPTAAVAPAWPSLSKRQHPAAPGRRPASQQVARKEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDRSPGGFDLLPPNVEKNATPFNDSPEALEAILMAGDQESVLTTDQTATTAAPRPAGRFAGQPQPLAALAPQEPMMSQMLRSRASSPSVVFAQRSPGAGGGXXXXXXXXGESSGGLPPSAKISDDVEPIVVNVLPAAGGSSNSSSGMLQNSLGGISDSKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADLCSSVRSDILTGGNGWGVERRHQQXXXXXXQRNDHSSTRWSWPPRNLRANYGMVPRSPPAATPTLVADGSWQSETTATTDGAAISEKNRGXXXXXXXXXXXXPRQR-LALAPPDIRSLVKELSTPSDGGGTAARGGKGSKRYRTATL 690
            MPSL+KKR HG DAPGDQQSTLKMRRSCDACALAKRRCDGELRC LC KKSIRCVYSTRQKSGPKGHKAP ESVAATATT          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTV PPG     TPADLAPSPTA VAPA PSLSK Q  AAPGRR  SQQVARKEPRPRH RKD DGK+I AVKSPAPAAA  AA AV+SPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEET G KFAPLPRMVPRRGSSVSAPGS SSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWA+ GVASD+RSPGGFD +P  VE+NATP ND+P+ALEAILMA +Q SVLTTDQTATTAAPRPAGRFAGQP P AALAPQEPMM QML SRA SP+VVFAQRSPGAGGG         ES+GGLPPSAKISD+VEPIVV+VLPAA         MLQNS GGISDS+AADCGDGACSPIS WTPEAVVAGASTLLAVLSDAD CSSVRSDIL GGNGWGVERRHQQ XXX   RND SSTRWSWPPR+LRANYGM PRSPP ATPTLV DGSW + T    DGAA+SE NR       XXXXXX     LALAPPDI SLVKELSTPSDGGGTAAR GKGSKRYRTATL
Sbjct:    1 MPSLIKKRLHGEDAPGDQQSTLKMRRSCDACALAKRRCDGELRCLLCCKKSIRCVYSTRQKSGPKGHKAPAESVAATATTXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTV-PPG-----TPADLAPSPTAPVAPASPSLSKGQQLAAPGRRHPSQQVARKEPRPRHHRKDADGKEIPAVKSPAPAAA--AANAVVSPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETVGGKFAPLPRMVPRRGSSVSAPGSGSSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWASVGVASDNRSPGGFDWIPSYVEENATPLNDAPKALEAILMATEQASVLTTDQTATTAAPRPAGRFAGQPPPSAALAPQEPMMYQMLPSRAFSPNVVFAQRSPGAGGGYGGGC----ESNGGLPPSAKISDEVEPIVVDVLPAAXXXXXXXXXMLQNSSGGISDSEAADCGDGACSPISGWTPEAVVAGASTLLAVLSDADFCSSVRSDILAGGNGWGVERRHQQHXXX---RNDDSSTRWSWPPRDLRANYGMAPRSPPGATPTLVVDGSWHTPT----DGAAVSENNRDHCYHRQXXXXXXXXXXGLALAPPDILSLVKELSTPSDGGGTAARRGKGSKRYRTATL 652

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Match: D7G8Z3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z3_ECTSI)

HSP 1 Score: 826 bits (2134), Expect = 9.710e-295
Identity = 536/672 (79.76%), Postives = 545/672 (81.10%), Query Frame = 0

Query:   19 MPSLVKKRSHGGDAPGDQQSTLKMRRSCDACALAKRRCDGELRCSLCSKKSIRCVYSTRQKSGPKGHKAPGESVAATATTIISSPTTADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTVVPPGKSEPITPADLAPSPTAAVAPAWPSLSKRQHPAAPGRRPASQQVARKEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDRSPGGFDLLPPNVEKNATPFNDSPEALEAILMAGDQESVLTTDQTATTAAPRPAGRFAGQPQPLAALAPQEPMMSQMLRSRASSPSVVFAQRSPGAGGGXXXXXXXXGESSGGLPPSAKISDDVEPIVVNVLPAAGGSSNSSSGMLQNSLGGISDSKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADLCSSVRSDILTGGNGWGVERRHQQXXXXXXQRNDHSSTRWSWPPRNLRANYGMVPRSPPAATPTLVADGSWQSETTATTDGAAISEKNRGXXXXXXXXXXXXPRQRLALAPPDIRSLVKELSTPSDGGGTAARGGKGSKRYRTATL 690
            MPSLVKKRSH GDAPGDQQSTLKMRRSCDACALAKRRCDGELRCSLC KKSIRCVYSTRQKSGPKGHK PGESVAAT TT ISS TTAD+          XXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTV PPGKSEPITPA LA S TAAVAPA PSLSKRQ PAAPGRR ASQQVARKEPR RHQRKDE                                                          AAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDD SPGGFD LP N E N TP +D P+ALEAILMAGDQESVLTTDQTATTAAPRPAG+FAGQP P  ALAPQEPMMSQML SRASSPSVVFAQRSPGAGG   XXXXXX        PS KISDDVEP+VVNVLP A GSS+SSSGMLQNSLGGISD+KAADCGDGACSPISAWTPEAVVAGASTLLAVLSDAD CS VRSDILTGGNGWGVERRHQQ XXXXX   D SSTRWSWPPRNL ANY MVPRSPPAATPT+VADGSW SETTATTDG A+SE    XXXXXXXXXXXX   RLALAPPDIRSLVKELSTPSDGGGT ARGGKGSKRYRTATL
Sbjct:    1 MPSLVKKRSHVGDAPGDQQSTLKMRRSCDACALAKRRCDGELRCSLCCKKSIRCVYSTRQKSGPKGHKTPGESVAATVTTSISSTTTADKPIKRCKTSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTV-PPGKSEPITPAALALSATAAVAPASPSLSKRQQPAAPGRRYASQQVARKEPRLRHQRKDE----------------------------------------------------------AAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDHSPGGFDWLPLNAE-NVTPSSDLPKALEAILMAGDQESVLTTDQTATTAAPRPAGQFAGQPPPSMALAPQEPMMSQMLPSRASSPSVVFAQRSPGAGGSYGXXXXXXXXXX----PSTKISDDVEPVVVNVLPTASGSSSSSSGMLQNSLGGISDTKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADFCSGVRSDILTGGNGWGVERRHQQHXXXXX---DDSSTRWSWPPRNLGANYSMVPRSPPAATPTVVADGSWHSETTATTDGVAVSEXXXXXXXXXXXXXXXX--XRLALAPPDIRSLVKELSTPSDGGGTTARGGKGSKRYRTATL 603

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Match: A0A6H5K1X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X2_9PHAE)

HSP 1 Score: 417 bits (1073), Expect = 1.390e-137
Identity = 292/485 (60.21%), Postives = 307/485 (63.30%), Query Frame = 0

Query:  182 KRQHPAAPGRRPASQQVARKEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDRSPGGFDLLPPNVEKNATPFNDSPEALEAILMAGDQESVLTTDQTATTAAPRPAGRFAGQPQPLAALAPQEPMMSQMLRSRASSPSVVFAQRSPGAGGGXXXXXXXXGESSGGLPPSAKISDDVEPIVVNVLPAAGGSSNSS-SGMLQNSLGGISDSKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADLCSSVRSDILTGGNGWGVERRHQQXXXXXXQRNDHSSTRWSWPPRNLRANYGMVPRSPPAATPTLVADGSWQSETTATTDGAAISEKNRGXXXXXXXXXXXXPRQRLALAPPDIRSLVKEL 665
            KRQ PAAPGRR  SQ+VARKEPRPRH RKDEDGK+I A                                PVAPALPA FPSLARSKSSAAEETAGAKFA LP MV RRGSSV+                          S        C        AEGWA+AGVASD+RSPGGFD +P  VE NATP ND+P+ALEAILMA +QESVLTTDQTATTAAPRPAGRFAGQP P AALAPQEPM+SQML SRASSPSVVFAQRSPGAGGG        GESS GLP  AKIS+D EPIVVNVLPAA GS     SGMLQNSLGG S  KAADCGDGAC+PISAWTPE VVAGAS LL VLSDAD  SSVRSD LTG                                        MVP SPPAA PTLVADG W SE TAT DGA +S+  R      XXXXXXX   RLALAPPDIR L+KEL
Sbjct:    2 KRQQPAAPGRRHPSQEVARKEPRPRHHRKDEDGKEIPA--------------------------------PVAPALPASFPSLARSKSSAAEETAGAKFASLPPMVSRRGSSVTC-------------------------SCRALRTMCC------GAAEGWASAGVASDNRSPGGFDWIPSYVEVNATPLNDAPKALEAILMAAEQESVLTTDQTATTAAPRPAGRFAGQPPPSAALAPQEPMISQMLPSRASSPSVVFAQRSPGAGGGYRGG----GESSDGLPIWAKISEDDEPIVVNVLPAASGSXXXXXSGMLQNSLGGTSYLKAADCGDGACNPISAWTPEPVVAGASALLVVLSDADFFSSVRSDTLTG----------------------------------------MVPSSPPAAMPTLVADGFWHSEITAT-DGA-LSKNQRHYSHRQXXXXXXX--XRLALAPPDIRGLIKEL 375

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BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Match: D7G933_ECTSI (Possible metalloprotease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G933_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 4.600e-39
Identity = 121/220 (55.00%), Postives = 126/220 (57.27%), Query Frame = 0

Query:  148 LKTVVPPGKSEPITPADLAPSPTAAVAPAWPSL---SKRQHPAAPGRRPASQQVARKEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMV-PRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDRSPGGFDLLPP 363
            L+TVVPPGKSEPITPADLAPSPT+   P        S R HPA      A  Q +R   R                   +PA AT                   R +PVAPALPAQFPSLARSK SAAEETAGAKFA  PRMV PRRGSSVSAPGSESSVDGSSSSLSWDD                       DRAEGWAAAGVASDDRS GGFD LPP
Sbjct:  166 LRTVVPPGKSEPITPADLAPSPTSRWHPRRLRCRRGSTRPHPA------ADTQASRWRGR-------------------SPALATTG-----------------RTKPVAPALPAQFPSLARSKRSAAEETAGAKFAAHPRMVVPRRGSSVSAPGSESSVDGSSSSLSWDD-----------------------DRAEGWAAAGVASDDRSHGGFDWLPP 320

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A6H5JWH9_9PHAE	6.920e-312	82.47	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
D7G8Z3_ECTSI	9.710e-295	79.76	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
A0A6H5K1X2_9PHAE	1.390e-137	60.21	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G933_ECTSI	4.600e-39	55.00	Possible metalloprotease n=1 Tax=Ectocarpus silicu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	SMART	SM00066	gal4_2	coord: 40..83 e-value: 8.7E-6 score: 35.2
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PFAM	PF00172	Zn_clus	coord: 44..79 e-value: 4.0E-5 score: 23.7
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS00463	ZN2_CY6_FUNGAL_1	coord: 45..72
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS50048	ZN2_CY6_FUNGAL_2	coord: 45..74 score: 8.599
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	GENE3D	4.10.240.10		coord: 38..97 e-value: 2.3E-7 score: 32.6
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	SUPERFAMILY	57701	Zn2/Cys6 DNA-binding domain	coord: 39..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig93	contig	E-siliculosus-1a_M_contig93:111120..114226 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig93.17338.1	mRNA_E-siliculosus-1a_M_contig93.17338.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig93 111120..114226 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17338.1 ID=prot_E-siliculosus-1a_M_contig93.17338.1|Name=mRNA_E-siliculosus-1a_M_contig93.17338.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=691bp
NTHTRRHTLPPSKTQTSAMPSLVKKRSHGGDAPGDQQSTLKMRRSCDACA
LAKRRCDGELRCSLCSKKSIRCVYSTRQKSGPKGHKAPGESVAATATTII
SSPTTADRTIKRRKTSKKPSKKQASAAAAPSTTTTGWQQHQLQQSSLLKT
VVPPGKSEPITPADLAPSPTAAVAPAWPSLSKRQHPAAPGRRPASQQVAR
KEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQ
QPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMVPRRGSSVSAPGSE
SSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVAS
DDRSPGGFDLLPPNVEKNATPFNDSPEALEAILMAGDQESVLTTDQTATT
AAPRPAGRFAGQPQPLAALAPQEPMMSQMLRSRASSPSVVFAQRSPGAGG
GYGGGYGGGGESSGGLPPSAKISDDVEPIVVNVLPAAGGSSNSSSGMLQN
SLGGISDSKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADLCSSVR
SDILTGGNGWGVERRHQQHQQHQQQRNDHSSTRWSWPPRNLRANYGMVPR
SPPAATPTLVADGSWQSETTATTDGAAISEKNRGHYYHRKQQQQQQPRQR
LALAPPDIRSLVKELSTPSDGGGTAARGGKGSKRYRTATL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036864	Zn2-C6_fun-type_DNA-bd_sf
IPR001138	Zn2-C6_fun-type_DNA-bd