mRNA_E-siliculosus-1a_M_contig93.17338.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Match: A0A6H5JWH9_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWH9_9PHAE) HSP 1 Score: 872 bits (2252), Expect = 6.920e-312 Identity = 555/673 (82.47%), Postives = 573/673 (85.14%), Query Frame = 1
Query: 55 MPSLVKKRSHGGDAPGDQQSTLKMRRSCDACALAKRRCDGELRCSLCSKKSIRCVYSTRQKSGPKGHKAPGESVAATATTIISSPTTADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTVVPPGKSEPITPADLAPSPTAAVAPAWPSLSKRQHPAAPGRRPASQQVARKEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDRSPGGFDLLPPNVEKNATPFNDSPEALEAILMAGDQESVLTTDQTATTAAPRPAGRFAGQPQPLAALAPQEPMMSQMLRSRASSPSVVFAQRSPGAGGGXXXXXXXXGESSGGLPPSAKISDDVEPIVVNVLPAAGGSSNSSSGMLQNSLGGISDSKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADLCSSVRSDILTGGNGWGVERRHQQXXXXXXQRNDHSSTRWSWPPRNLRANYGMVPRSPPAATPTLVADGSWQSETTATTDGAAISEKNRGXXXXXXXXXXXXPRQR-LALAPPDIRSLVKELSTPSDGGGTAARGGKGSKRYRTATL 2070
MPSL+KKR HG DAPGDQQSTLKMRRSCDACALAKRRCDGELRC LC KKSIRCVYSTRQKSGPKGHKAP ESVAATATT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTV PPG TPADLAPSPTA VAPA PSLSK Q AAPGRR SQQVARKEPRPRH RKD DGK+I AVKSPAPAAA AA AV+SPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEET G KFAPLPRMVPRRGSSVSAPGS SSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWA+ GVASD+RSPGGFD +P VE+NATP ND+P+ALEAILMA +Q SVLTTDQTATTAAPRPAGRFAGQP P AALAPQEPMM QML SRA SP+VVFAQRSPGAGGG ES+GGLPPSAKISD+VEPIVV+VLPAA MLQNS GGISDS+AADCGDGACSPIS WTPEAVVAGASTLLAVLSDAD CSSVRSDIL GGNGWGVERRHQQ XXX RND SSTRWSWPPR+LRANYGM PRSPP ATPTLV DGSW + T DGAA+SE NR XXXXXX LALAPPDI SLVKELSTPSDGGGTAAR GKGSKRYRTATL
Sbjct: 1 MPSLIKKRLHGEDAPGDQQSTLKMRRSCDACALAKRRCDGELRCLLCCKKSIRCVYSTRQKSGPKGHKAPAESVAATATTXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTV-PPG-----TPADLAPSPTAPVAPASPSLSKGQQLAAPGRRHPSQQVARKEPRPRHHRKDADGKEIPAVKSPAPAAA--AANAVVSPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETVGGKFAPLPRMVPRRGSSVSAPGSGSSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWASVGVASDNRSPGGFDWIPSYVEENATPLNDAPKALEAILMATEQASVLTTDQTATTAAPRPAGRFAGQPPPSAALAPQEPMMYQMLPSRAFSPNVVFAQRSPGAGGGYGGGC----ESNGGLPPSAKISDEVEPIVVDVLPAAXXXXXXXXXMLQNSSGGISDSEAADCGDGACSPISGWTPEAVVAGASTLLAVLSDADFCSSVRSDILAGGNGWGVERRHQQHXXX---RNDDSSTRWSWPPRDLRANYGMAPRSPPGATPTLVVDGSWHTPT----DGAAVSENNRDHCYHRQXXXXXXXXXXGLALAPPDILSLVKELSTPSDGGGTAARRGKGSKRYRTATL 652
BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Match: D7G8Z3_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Z3_ECTSI) HSP 1 Score: 826 bits (2134), Expect = 9.710e-295 Identity = 536/672 (79.76%), Postives = 545/672 (81.10%), Query Frame = 1
Query: 55 MPSLVKKRSHGGDAPGDQQSTLKMRRSCDACALAKRRCDGELRCSLCSKKSIRCVYSTRQKSGPKGHKAPGESVAATATTIISSPTTADRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTVVPPGKSEPITPADLAPSPTAAVAPAWPSLSKRQHPAAPGRRPASQQVARKEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDRSPGGFDLLPPNVEKNATPFNDSPEALEAILMAGDQESVLTTDQTATTAAPRPAGRFAGQPQPLAALAPQEPMMSQMLRSRASSPSVVFAQRSPGAGGGXXXXXXXXGESSGGLPPSAKISDDVEPIVVNVLPAAGGSSNSSSGMLQNSLGGISDSKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADLCSSVRSDILTGGNGWGVERRHQQXXXXXXQRNDHSSTRWSWPPRNLRANYGMVPRSPPAATPTLVADGSWQSETTATTDGAAISEKNRGXXXXXXXXXXXXPRQRLALAPPDIRSLVKELSTPSDGGGTAARGGKGSKRYRTATL 2070
MPSLVKKRSH GDAPGDQQSTLKMRRSCDACALAKRRCDGELRCSLC KKSIRCVYSTRQKSGPKGHK PGESVAAT TT ISS TTAD+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTV PPGKSEPITPA LA S TAAVAPA PSLSKRQ PAAPGRR ASQQVARKEPR RHQRKDE AAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDD SPGGFD LP N E N TP +D P+ALEAILMAGDQESVLTTDQTATTAAPRPAG+FAGQP P ALAPQEPMMSQML SRASSPSVVFAQRSPGAGG XXXXXX PS KISDDVEP+VVNVLP A GSS+SSSGMLQNSLGGISD+KAADCGDGACSPISAWTPEAVVAGASTLLAVLSDAD CS VRSDILTGGNGWGVERRHQQ XXXXX D SSTRWSWPPRNL ANY MVPRSPPAATPT+VADGSW SETTATTDG A+SE XXXXXXXXXXXX RLALAPPDIRSLVKELSTPSDGGGT ARGGKGSKRYRTATL
Sbjct: 1 MPSLVKKRSHVGDAPGDQQSTLKMRRSCDACALAKRRCDGELRCSLCCKKSIRCVYSTRQKSGPKGHKTPGESVAATVTTSISSTTTADKPIKRCKTSKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKTV-PPGKSEPITPAALALSATAAVAPASPSLSKRQQPAAPGRRYASQQVARKEPRLRHQRKDE----------------------------------------------------------AAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDHSPGGFDWLPLNAE-NVTPSSDLPKALEAILMAGDQESVLTTDQTATTAAPRPAGQFAGQPPPSMALAPQEPMMSQMLPSRASSPSVVFAQRSPGAGGSYGXXXXXXXXXX----PSTKISDDVEPVVVNVLPTASGSSSSSSGMLQNSLGGISDTKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADFCSGVRSDILTGGNGWGVERRHQQHXXXXX---DDSSTRWSWPPRNLGANYSMVPRSPPAATPTVVADGSWHSETTATTDGVAVSEXXXXXXXXXXXXXXXX--XRLALAPPDIRSLVKELSTPSDGGGTTARGGKGSKRYRTATL 603
BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Match: A0A6H5K1X2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X2_9PHAE) HSP 1 Score: 417 bits (1073), Expect = 1.390e-137 Identity = 292/485 (60.21%), Postives = 307/485 (63.30%), Query Frame = 1
Query: 544 KRQHPAAPGRRPASQQVARKEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMVPRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDRSPGGFDLLPPNVEKNATPFNDSPEALEAILMAGDQESVLTTDQTATTAAPRPAGRFAGQPQPLAALAPQEPMMSQMLRSRASSPSVVFAQRSPGAGGGXXXXXXXXGESSGGLPPSAKISDDVEPIVVNVLPAAGGSSNSS-SGMLQNSLGGISDSKAADCGDGACSPISAWTPEAVVAGASTLLAVLSDADLCSSVRSDILTGGNGWGVERRHQQXXXXXXQRNDHSSTRWSWPPRNLRANYGMVPRSPPAATPTLVADGSWQSETTATTDGAAISEKNRGXXXXXXXXXXXXPRQRLALAPPDIRSLVKEL 1995
KRQ PAAPGRR SQ+VARKEPRPRH RKDEDGK+I A PVAPALPA FPSLARSKSSAAEETAGAKFA LP MV RRGSSV+ S C AEGWA+AGVASD+RSPGGFD +P VE NATP ND+P+ALEAILMA +QESVLTTDQTATTAAPRPAGRFAGQP P AALAPQEPM+SQML SRASSPSVVFAQRSPGAGGG GESS GLP AKIS+D EPIVVNVLPAA GS SGMLQNSLGG S KAADCGDGAC+PISAWTPE VVAGAS LL VLSDAD SSVRSD LTG MVP SPPAA PTLVADG W SE TAT DGA +S+ R XXXXXXX RLALAPPDIR L+KEL
Sbjct: 2 KRQQPAAPGRRHPSQEVARKEPRPRHHRKDEDGKEIPA--------------------------------PVAPALPASFPSLARSKSSAAEETAGAKFASLPPMVSRRGSSVTC-------------------------SCRALRTMCC------GAAEGWASAGVASDNRSPGGFDWIPSYVEVNATPLNDAPKALEAILMAAEQESVLTTDQTATTAAPRPAGRFAGQPPPSAALAPQEPMISQMLPSRASSPSVVFAQRSPGAGGGYRGG----GESSDGLPIWAKISEDDEPIVVNVLPAASGSXXXXXSGMLQNSLGGTSYLKAADCGDGACNPISAWTPEPVVAGASALLVVLSDADFFSSVRSDTLTG----------------------------------------MVPSSPPAAMPTLVADGFWHSEITAT-DGA-LSKNQRHYSHRQXXXXXXX--XRLALAPPDIRGLIKEL 375
BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Match: D7G933_ECTSI (Possible metalloprotease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G933_ECTSI) HSP 1 Score: 157 bits (396), Expect = 4.600e-39 Identity = 121/220 (55.00%), Postives = 126/220 (57.27%), Query Frame = 1
Query: 442 LKTVVPPGKSEPITPADLAPSPTAAVAPAWPSL---SKRQHPAAPGRRPASQQVARKEPRPRHQRKDEDGKKIAAVKSPAPAAATAAATAVISPSNGTATSRFARQQPVAPALPAQFPSLARSKSSAAEETAGAKFAPLPRMV-PRRGSSVSAPGSESSVDGSSSSLSWDDVQDVFVSSLEDDVLWSCDDFSDDDRAEGWAAAGVASDDRSPGGFDLLPP 1089
L+TVVPPGKSEPITPADLAPSPT+ P S R HPA A Q +R R +PA AT R +PVAPALPAQFPSLARSK SAAEETAGAKFA PRMV PRRGSSVSAPGSESSVDGSSSSLSWDD DRAEGWAAAGVASDDRS GGFD LPP
Sbjct: 166 LRTVVPPGKSEPITPADLAPSPTSRWHPRRLRCRRGSTRPHPA------ADTQASRWRGR-------------------SPALATTG-----------------RTKPVAPALPAQFPSLARSKRSAAEETAGAKFAAHPRMVVPRRGSSVSAPGSESSVDGSSSSLSWDD-----------------------DRAEGWAAAGVASDDRSHGGFDWLPP 320 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17338.1 >prot_E-siliculosus-1a_M_contig93.17338.1 ID=prot_E-siliculosus-1a_M_contig93.17338.1|Name=mRNA_E-siliculosus-1a_M_contig93.17338.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=691bp NTHTRRHTLPPSKTQTSAMPSLVKKRSHGGDAPGDQQSTLKMRRSCDACAback to top mRNA from alignment at E-siliculosus-1a_M_contig93:111120..114226- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig93.17338.1 ID=mRNA_E-siliculosus-1a_M_contig93.17338.1|Name=mRNA_E-siliculosus-1a_M_contig93.17338.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3107bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:111120..114226- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:111120..114226- >mRNA_E-siliculosus-1a_M_contig93.17338.1 ID=mRNA_E-siliculosus-1a_M_contig93.17338.1|Name=mRNA_E-siliculosus-1a_M_contig93.17338.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=4146bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:111120..114226- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |