prot_E-siliculosus-1a_M_contig93.17327.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig93.17327.1
Unique Nameprot_E-siliculosus-1a_M_contig93.17327.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length186
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig93.17327.1 vs. uniprot
Match: A0A6H5KRW9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW9_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 1.810e-99
Identity = 155/178 (87.08%), Postives = 160/178 (89.89%), Query Frame = 0 
Query:    1 MNKRTMDETALCDSILQFAGGQGLPAAGNSPYLSVPATGGSADATAGELAGQTPFKIDT-GGTAEPSACTGSTTTAIQRQHLQKEGLMRAFVGTKLGDFNMRGVEAGMSMCHVEKKPGKFLNTQGRRQLRAELSGPYGGKGSSLRRGKTSGAGRQVVGDVRSGGFVENKTKPGVPDSS 177
            MNKRT+DETALCDSILQFA GQGLP AGNSPY+SVPATGGSADA AGEL  QTPFKID  GG AEP+A T STTTAIQ QHLQKEGLMRAFVGTKLG+FNMRGVEAGMS CHVEKKPGK LNTQGRRQ+RAELSGPYG KGSSLRRGKTSG GRQVVGDVRSGGFVE  TK GVPDSS
Sbjct:    1 MNKRTLDETALCDSILQFADGQGLPVAGNSPYVSVPATGGSADAAAGELVDQTPFKIDNFGGPAEPNAATASTTTAIQ-QHLQKEGLMRAFVGTKLGEFNMRGVEAGMSWCHVEKKPGKVLNTQGRRQMRAELSGPYGEKGSSLRRGKTSGPGRQVVGDVRSGGFVEKNTKSGVPDSS 177
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig93.17327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KRW9_9PHAE1.810e-9987.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig93contigE-siliculosus-1a_M_contig93:22271..26172 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig93.17327.1mRNA_E-siliculosus-1a_M_contig93.17327.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig93 22252..27201 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig93.17327.1 ID=prot_E-siliculosus-1a_M_contig93.17327.1|Name=mRNA_E-siliculosus-1a_M_contig93.17327.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=186bp
MNKRTMDETALCDSILQFAGGQGLPAAGNSPYLSVPATGGSADATAGELA
GQTPFKIDTGGTAEPSACTGSTTTAIQRQHLQKEGLMRAFVGTKLGDFNM
RGVEAGMSMCHVEKKPGKFLNTQGRRQLRAELSGPYGGKGSSLRRGKTSG
AGRQVVGDVRSGGFVENKTKPGVPDSSYPPASKDR*
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