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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 549 |
| Model size | 1748 |
| Exons | 1 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622936472.0300891-CDS-E-siliculosus-1a_M_contig93:7623..8172 | 1622936472.0300891-CDS-E-siliculosus-1a_M_contig93:7623..8172 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 7624..8172 + |
| 1696251094.1738944-CDS-E-siliculosus-1a_M_contig93:7623..8172 | 1696251094.1738944-CDS-E-siliculosus-1a_M_contig93:7623..8172 | Ectocarpus siliculosus Ec864m_EcPH12_78m male | CDS | E-siliculosus-1a_M_contig93 7624..8172 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17323.1 >prot_E-siliculosus-1a_M_contig93.17323.1 ID=prot_E-siliculosus-1a_M_contig93.17323.1|Name=mRNA_E-siliculosus-1a_M_contig93.17323.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=183bp
MTVIYSRGHVKGAHQQAHQLVPILFSPCLLGHDPCIRTVTQQFIDASLHR
LFILVLAAIQVLEVEPWNTERHGRNTGRAWAECGERVPAYIENCRARPHG
FVQQNAVRMARQLYAPKSHAARKWSPEVKQRVGALADKLAADPHYRDKFT
RPTEDPAHGKPGTPHQQQERERGEPEGTVASV* back to topmRNA from alignment at E-siliculosus-1a_M_contig93:6853..8600+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig93.17323.1 ID=mRNA_E-siliculosus-1a_M_contig93.17323.1|Name=mRNA_E-siliculosus-1a_M_contig93.17323.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=1748bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:6853..8600+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
TGATGGGGGTTGGCCTTAGCAGCAGCGGCCGCCACTACCGGAGGCACCGC
GATGACCCAGAATGGAGGGCGGCACAAGCTGCGAAGCGCGCCCAGCGGGA
ACCTCCGAAACCTATCGACCCGCAGAGGATGCCCACTCTCGTGAAGCTCC
TCGACGTGGTGAGTTTTGAGAGTTCACCTGTCGCTGTATAATCCTTGTGC
GCCCCTAAGAGGATGGCGTTTGTTTTCGGCTGGCATCTCTGCACAAGGTT
TTGGCCGCCGCACGGCCCGCTTGGTCGTAGCGATCCCAAGGAGTTCTGCG
TAGTGAGACTTGGGGTGCGGTGTAGGTGAAGGTGAGAGTTCCCGTGTGTG
GATAGATGTGTGATGTACGGCGTGACGATTGGCAGTCCCACCTCAGATGG
GACTACTGTCGGAACACGCCAAGGGAAGGGAGCGCCTCAGGAAGGACCTT
GCTATTTTCACCCACCGCGACACCGCGACAGATTGATTAATGTGAGAGGG
CGGTGACTTTTGTAGACCTGATTTCCCTCAACGCCTAAACGGACGTTGAG
GCACGTGACACCGCTGCAGTTGCGAGATACCCCTTCCTCTCGTCGCCGTC
CCTCACATAAATGCGGGAGCAACTTATTGTGCGCAGTCCGTCCATACTCA
TGGCAGCAGGCACCGTAGGCTGTAGGCGGGTGTCGTTGCGATGAACCGTC
CTCGTCGCCCTTTTCTTTTCCGTTGCAGCCAACTCGTCGCGCACCCCAAC
AGCAGCGCCTGATACAGTGTAATGACGGTGATATACAGCAGAGGCCATGT
GAAGGGCGCACATCAACAGGCACATCAGCTAGTGCCCATCCTCTTCTCGC
CGTGCCTTCTGGGGCATGACCCTTGCATTCGCACGGTGACACAGCAGTTC
ATCGACGCCTCTCTTCATCGCCTTTTCATCTTGGTGCTTGCCGCCATTCA
GGTGCTCGAAGTGGAACCGTGGAACACTGAACGTCACGGCAGAAACACGG
GCAGGGCATGGGCGGAGTGTGGAGAGCGAGTCCCTGCGTACATCGAAAAC
TGCCGAGCACGGCCCCATGGGTTCGTGCAGCAAAACGCGGTTCGCATGGC
TCGCCAGCTGTACGCACCCAAGTCCCACGCTGCCCGGAAATGGAGCCCGG
AGGTCAAGCAGAGGGTGGGGGCGTTGGCGGATAAGCTGGCAGCGGACCCG
CATTATCGGGATAAGTTCACCCGCCCAACGGAGGACCCCGCGCATGGGAA
GCCCGGAACTCCCCACCAGCAGCAGGAGCGCGAGCGCGGGGAGCCCGAGG
GGACCGTTGCCAGCGTCTGATAGCGGTACCGTTCGCGCTGTCGGGGAAGG
CGTGTCGCGTTTTTTTTTTTTTTCTGTTTTCTTAACGAGTCGATGCCCCA
TGGTCACTGCCTACAATCGCCATCGCGCGCAAACATCTGCCCGGGCGTGT
GTGATGCTACGACGGTCACTCCTTGGGGAGGGGGGGGGGGCTTGCTATTT
CATTGGCGCGTATTTATCTCGAGAGAGGGGAGAGGGTGGAGAATTCCGTC
CCGCCCCATGAATGTTCAGATAGACAGGCGTCCGAGGATGTGCTGGATGT
CGGGGTCATGGCGGAGAGCTGGTGCGAGGTGTGCCTTTTCTGCGGCCTGG
ATGGTTAGTTGGGTGGGGTCCTCCACTCTCGTCATTTTTAACGGTCGTCC
TGAGTAAAAACGTCCTGAGTAAGAAATGACGCACGCGTTCCGTGAGTG back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:6853..8600+ >mRNA_E-siliculosus-1a_M_contig93.17323.1 ID=mRNA_E-siliculosus-1a_M_contig93.17323.1|Name=mRNA_E-siliculosus-1a_M_contig93.17323.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1098bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:6853..8600+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGACGGTGATATACAGCAGAGGCCATGTGAAGGGCGCACATCAACAGGC
ACATCAGCTAGTGCCCATCCTCTTCTCGCCGTGCCTTCTGGGGCATGACC
CTTGCATTCGCACGGTGACACAGCAGTTCATCGACGCCTCTCTTCATCGC
CTTTTCATCTTGGTGCTTGCCGCCATTCAGGTGCTCGAAGTGGAACCGTG
GAACACTGAACGTCACGGCAGAAACACGGGCAGGGCATGGGCGGAGTGTG
GAGAGCGAGTCCCTGCGTACATCGAAAACTGCCGAGCACGGCCCCATGGG
TTCGTGCAGCAAAACGCGGTTCGCATGGCTCGCCAGCTGTACGCACCCAA
GTCCCACGCTGCCCGGAAATGGAGCCCGGAGGTCAAGCAGAGGGTGGGGG
CGTTGGCGGATAAGCTGGCAGCGGACCCGCATTATCGGGATAAGTTCACC
CGCCCAACGGAGGACCCCGCGCATGGGAAGCCCGGAACTCCCCACCAGCA
GCAGGAGCGCGAGCGCGGGGAGCCCGAGGGGACCGTTGCCAGCGTCTGAA
TGACGGTGATATACAGCAGAGGCCATGTGAAGGGCGCACATCAACAGGCA
CATCAGCTAGTGCCCATCCTCTTCTCGCCGTGCCTTCTGGGGCATGACCC
TTGCATTCGCACGGTGACACAGCAGTTCATCGACGCCTCTCTTCATCGCC
TTTTCATCTTGGTGCTTGCCGCCATTCAGGTGCTCGAAGTGGAACCGTGG
AACACTGAACGTCACGGCAGAAACACGGGCAGGGCATGGGCGGAGTGTGG
AGAGCGAGTCCCTGCGTACATCGAAAACTGCCGAGCACGGCCCCATGGGT
TCGTGCAGCAAAACGCGGTTCGCATGGCTCGCCAGCTGTACGCACCCAAG
TCCCACGCTGCCCGGAAATGGAGCCCGGAGGTCAAGCAGAGGGTGGGGGC
GTTGGCGGATAAGCTGGCAGCGGACCCGCATTATCGGGATAAGTTCACCC
GCCCAACGGAGGACCCCGCGCATGGGAAGCCCGGAACTCCCCACCAGCAG
CAGGAGCGCGAGCGCGGGGAGCCCGAGGGGACCGTTGCCAGCGTCTGA back to top
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