|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 0 |
| Cds size | 486 |
| Model size | 638 |
| Exons | 7 |
| Hectar predicted targeting category | other localisation |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig93.17321.1 >prot_E-siliculosus-1a_M_contig93.17321.1 ID=prot_E-siliculosus-1a_M_contig93.17321.1|Name=mRNA_E-siliculosus-1a_M_contig93.17321.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=162bp
MECSATSSTPGAVLARLAPNTPPRGEGKGKGRRATVASSSTPLEAAHEVD
GEGRPVSGSQNVGSGLEEFEFQQAIQASRADQDGPAGGSSSAGCTPGSSY
PKGTNSECSDSDNVFELTDSDEGWTPSNKKPKRRVEHSYKKRGTATAAAP
SKRQRVRGGNSG back to topmRNA from alignment at E-siliculosus-1a_M_contig93:1806..5789- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig93.17321.1 ID=mRNA_E-siliculosus-1a_M_contig93.17321.1|Name=mRNA_E-siliculosus-1a_M_contig93.17321.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3984bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:1806..5789- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GGCTGTGTTCATCCGTCGCGCGACGGTGCAAGGACGCGCTGCTATACGCC
GACGAGGCAACGAAGGTAGGTGGTAGCAAGTTGGCGAGCGAGGTGGCGGC
GACCGCTTGCTCTCGCTCTCTTTTCCCTCGCCGTCGGCCTGTGTCGGCAT
CTCTGTGACCCGGGTCTATCTCATCTACCTTCGCCCTTGTCTGTGTCGCC
GTTGTTGTTTTGTGTGTGTGTCCTTATGCTCCAGCAGTATATGTGTCGTC
CCCTCTCTTCCTCTCCCTCTCTCTCTGGCGTTTTTTTTTTTTTTTTCGAG
CAGTAAGAATTCGCATCCGGCGGTTCCGGCTGCGCTGTGTACGGACAATT
GTGTAGGTTTTTGGATGAGGTCGGATCGCTGATGTGTTTGTGAGTCATGT
CCGGGGCTCTGTATTGCGGTCTCAAGCACGTCCGTCCCGGCCACCGTTGG
CATTCTACGCCGGAACAAGTCACACATTGTCCCCACCGTTTGAGCGTCCT
GACGATCAGCGACGTCGCCTCATTTACCGTTCCTGCTGCTTGCCCGAGCC
TGCACCCACTTCCCACGTGCCACTGCTGGTCATGACTCGTACACACATAC
ATACACACCAGCACACCTCTCTCTTTGGTTGTCTCGGTGGTGTCCCACCG
ATATAGATAGGTATGTAGATATTATATGTATACATATGTAGATAGACATG
TATCACACGTCGTTCCTAACTGCCCGACCTGCTGGCAGACATGGCATGTG
GTACAGCAGCAGTATACCGTCTCGGTCCCTGCTTTTTTTGTGTTTCGGCA
GCAAATGTTCGTAACCTGGTTAGGTGCAAGTAGTACCTACCTACATCTCG
TAGGTTGGCGCTGGTGCGTGGCATCCTTTTTCTCTGGTCTCTCCGTGACA
CCCCCGTTGGCGCGGGGTTTCATTTGCGGGGCCCCGCTCCCCCCTCCGCC
TTTCCCCATGCAACACCCATCCGCACATCCACACGCTGCCCATACACGCT
CGGGTACAAGCTGTTGTACCCGATGCAGCCTTCCACTACTGCTGTAGTCC
TGCGCGCACACGTACATATCCTCCCTCCCTCACTGACCCCGACCGAAACC
TGCCGGACCCCGCGGCGCATGTTTTCGCCAAGAGCAGGCGACGAACTAGG
TTCCCGCTGTGGCATCACCCTAAGTACCGCCCACGCCCTTGAGGTGAGTT
GGCAAGCGTCTGCAGCACTTGGTATTGTTTTCGTTTCCTGCGCGATAACA
TGATTTCAAATACCGTCTCGGCTTTCAGCGCAAAAAAAACAAAGGACAAC
AATACGAGAGAACACCACGCAGCAGCAGTGGCGACCTTCGTGTTGAAATT
AATTCAATTTTTTAGTTGTTGGTTGGGAGAGCTGGTTTCATCGGAGACAG
CAGGTGCAGACACTATCTTTCGCCACTAGGCTGATCATCCGAGACCAAGG
TATAGTTGTCTGTATTGGCGGTCGGTCTTATGACGGATGTGTAGTGCGTC
CCGTGATTCCGAAGTCAACGTGTGTCCAAACGGAAGGTGTGTCTATAATA
TCTTTTTTCGACTTTTTGCAACCGTGAGGGACAGGCCTGTTGTGCGTGTG
TGCAGGAGGTCATGCAGAACATATATCCCTAGAAAAGCGCTCGTGCTTTT
TTTTAATCACATCTCTGCACATTGCTGTAGGTAGCGCAAGAACACCGCCT
TGATGTATGCTCATCCCGTTTCCTTCGTCCCCTGTTTCCGTTTATGTCTC
CCCCCCCCGTGCGCATGCAGTGCTTACATCCGTGCTCCATCCCCTGTGGA
GATGGAGTGCTCGGCAACTTCATCAACCCCTGGTGAGAATCTCTGCTAAC
GTCTGCATGACTGTTGTCGAAGGGAATAGAACGTTTGTCTGATTGGAACA
CACGTTGTTGGTGCATTCACAGCGCGGACACACACAGGAAACTGCCCGTC
TAGCTGTATCTATGCTGTGAGCGCAGCGGGTTTGTGTTTGAGCTGCTGGG
TAAAAATATGGGGTCTGAAGACAGGGGGCGGTAGGTGGGCGCTGTTGTGA
ACATGTGTTCTTGCGACTTGCTTCTGCTTTTTGGTCAGGTGCCGTTCTTG
CGCGCTTGGCGCCCAACACCCCCCCAAGGGGCGAGGGCAAGGGCAAGGGC
CGGCGGGCAACGGTCGCGTCATCGTCGACGCCGCTCGAGGCTGCGCACGA
AGTCGACGGCGAAGGACGCCCCGTCTCCGGCAGCCAAAACGTCGGCTCGG
GGCTCGAGGAGGTGGGTCCCGAACAGGGTGTGGCGGGGGGGCGTGGGGCG
TGGCTTGTGCAGGTACCGAGCGAGCATTGTATTGCAGAGTAATTCGATTC
AAGTATCCGTGTACACACTAGTCGGACCGTTTGCTGCTTTCTGGCTCGTC
CTCGGGATATATCTCGACATTGCACAAGTATGATCCAAGCGAGAGGATGG
GGCCCCAACCGAGGTGTGATCGCGTACAGTGCTCAACGAGTAGTTCCCGT
TGCGGTTCAGGAAGCGAGGGCCGTTGCTCGTCGGTTCTACGTATGCATTC
ATCGAGGAGACCAAGGTTTGTATAACTTTCCCCCCGCCAAACACCTCCAC
CCCAGCCTGATACTCTGGCCGTTTTACTCCTCGTCTCGTGCTGCACAGTT
CGAATTCCAGCAGGCTATCCAGGCGAGTCGCGCCGATCAAGATGGCCCCG
CAGGCGGTTCGTCGAGCGCCGGCTGCACCCCCGGCAGCAGCTACCCAAAG
GTGAGGCAGGGCGGCTTCCATTTGTACATGCAACCCCACCCCCCCGTAGA
AATAGTAGCTCCGTAAGGATAGCTCACCAGCCGAGGGTACCCGCGGCCTA
AACGACGAGAGTAGAGCGGGCGCGGTCTGTCTTTTTCAGGTTGCGTCGGG
CGAGAAACGACAACAATAATATTGTATGTCGGCGCTTGGCTGTCGAGCGG
AACGTTCGGATGAAAAGCCAGATGGTACCCTTCGGGCGGTGCAGCGTTTG
TCCCTATCGGCAACTCTCGGGTATCACCTTCACTGCTTGTGGTTAGTCAG
TATCGTGCTCCCGCCGTCCTTGCTTCATGCGTGCGAATTCGCCGTGGGTT
CGCGCCAAAACAGTGTCGGCCCCGGCTCTGTATCTAACGCAGACATTTCG
TCCGCCATACCAACCCCGACACCCTCCGCTCGTTTTAAACGGCCGCCGAT
ATGACACACCTCCAGGGAACCAACAGCGAGTGTTCGGACAGCGACAACGT
CTTCGAGCTGACCGATAGCGACGAGGGGTGGACGCCCTCCAATAAGAAGC
CCAAACGACGGGTCGAGGTTAGTTCTCCTTCGCCGGCATAGGAGGCCCTT
TGATGTTCTCCTGCGGTTGAGCTGATGTTGTCGACGTTAGTGTTGTTTGT
TCGTCTTTACCTCGGCGTCTCGGTGCTTGCAGGGGGCACTCGCACGGGGC
TCGGTGTCACGCGTGTCGTATTCGCATAGACCCACAGACCTGCGAAGGCG
GGGCGGAGCATGCCGTTTCCCTTTTTTCGAGGGACCAGGCCCGCATTCGC
CAGGCAGTGCATCGGGCTTTTTGGGTGGGGCGCTCTGCACTGGGCCTTCC
CTGTTGTTTTTGTCGACCGTTCGTTACCTACATCAGCTCATGTTTTCGGG
CATTAGACTGCCAGTTACCGGCGGCCGTCGACATGATGCACTGCACGCAT
GCGTAAGGGCGCAAACGACACGTCGCGCGTCCGTGTTGTCGTGCCGAAAC
GACTGTGAAATATGGGTGCAGCACCTGATGATGGAGATGTTCTTCCGGGG
GGCGACGACGGGTTGAACGAAAGCAACATCGCGCATTATCGCACAATAAC
AAGTACCCCGCGCTCGCCCCCTTCCCCAAATTCTTGTGCCGTTGACCGTT
GACTAGCACTCGTACAAGAAGCGCGGGACTGCTACGGCGGCGGCCCCTTC
CAAGCGACAGCGCGTCCGTGGCGGCAACAGCGGC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig93:1806..5789- >mRNA_E-siliculosus-1a_M_contig93.17321.1 ID=mRNA_E-siliculosus-1a_M_contig93.17321.1|Name=mRNA_E-siliculosus-1a_M_contig93.17321.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=972bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig93:1806..5789- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGAGTGCTCGGCAACTTCATCAACCCCTGATGGAGTGCTCGGCAACTT
CATCAACCCCTGGTGCCGTTCTTGCGCGCTTGGCGCCCAACACCCCCCCA
AGGGGCGAGGGCAAGGGCAAGGGCCGGCGGGCAACGGTCGCGTCATCGTC
GACGCCGCTCGAGGCTGCGCACGAAGTCGACGGCGAAGGACGCCCCGTCT
CCGGCAGCCAAAACGTCGGCTCGGGGCTCGAGGAGGTGCCGTTCTTGCGC
GCTTGGCGCCCAACACCCCCCCAAGGGGCGAGGGCAAGGGCAAGGGCCGG
CGGGCAACGGTCGCGTCATCGTCGACGCCGCTCGAGGCTGCGCACGAAGT
CGACGGCGAAGGACGCCCCGTCTCCGGCAGCCAAAACGTCGGCTCGGGGC
TCGAGGAGTTCGAATTCCAGCAGGCTATCCAGGCGAGTCGCGCCGATCAA
GATGGCCCCGCAGGCGGTTCGTCGAGCGCCGGCTGCACCCCCGGCAGCAG
CTACCCAAAGTTCGAATTCCAGCAGGCTATCCAGGCGAGTCGCGCCGATC
AAGATGGCCCCGCAGGCGGTTCGTCGAGCGCCGGCTGCACCCCCGGCAGC
AGCTACCCAAAGGGAACCAACAGCGAGTGTTCGGACAGCGACAACGTCTT
CGAGCTGACCGATAGCGACGAGGGGTGGACGCCCTCCAATAAGAAGCCCA
AACGACGGGTCGAGGGAACCAACAGCGAGTGTTCGGACAGCGACAACGTC
TTCGAGCTGACCGATAGCGACGAGGGGTGGACGCCCTCCAATAAGAAGCC
CAAACGACGGGTCGAGCACTCGTACAAGAAGCGCGGGACTGCTACGGCGG
CGGCCCCTTCCAAGCGACAGCGCGTCCGTGGCGGCAACAGCGGCCACTCG
TACAAGAAGCGCGGGACTGCTACGGCGGCGGCCCCTTCCAAGCGACAGCG
CGTCCGTGGCGGCAACAGCGGC back to top
|