prot_E-siliculosus-1a_M_contig922.17320.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig922.17320.1
Unique Nameprot_E-siliculosus-1a_M_contig922.17320.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length47
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: UPI001B8AF93F (photosystem I iron-sulfur center protein PsaC n=1 Tax=Leptolyngbya sp. 7M TaxID=2812896 RepID=UPI001B8AF93F)

HSP 1 Score: 95.5 bits (236), Expect = 8.820e-25
Identity = 44/46 (95.65%), Postives = 46/46 (100.00%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            AGQIAS+PRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGL+Y
Sbjct:   35 AGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY 80          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: A0A076MD99_9VIRU (PsaC (Fragment) n=38 Tax=uncultured phage TaxID=278008 RepID=A0A076MD99_9VIRU)

HSP 1 Score: 92.4 bits (228), Expect = 6.450e-24
Identity = 43/46 (93.48%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            A QIAS+PRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGL+Y
Sbjct:    3 AKQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLAY 48          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: UPI001985260A (Photosystem I iron-sulfur center protein PsaC n=1 Tax=Gloeobacterales cyanobacterium ES-bin-141 TaxID=2812628 RepID=UPI001985260A)

HSP 1 Score: 92.4 bits (228), Expect = 8.400e-24
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            AG IAS+PRTEDCVGCKRCETACPTD+LSIRVYLGAETTRSMGL+Y
Sbjct:   14 AGSIASSPRTEDCVGCKRCETACPTDYLSIRVYLGAETTRSMGLAY 59          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: A0A076MJF2_9VIRU (PsaC (Fragment) n=1 Tax=uncultured phage TaxID=278008 RepID=A0A076MJF2_9VIRU)

HSP 1 Score: 91.3 bits (225), Expect = 1.900e-23
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            AGQIA++PRTEDCVGCKRCETACPTDFLSIRVYL AETTRSMGL+Y
Sbjct:    4 AGQIAASPRTEDCVGCKRCETACPTDFLSIRVYLRAETTRSMGLAY 49          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: A0A0A2A182_PROMR (Photosystem I iron-sulfur center n=19 Tax=root TaxID=1 RepID=A0A0A2A182_PROMR)

HSP 1 Score: 91.7 bits (226), Expect = 1.930e-23
Identity = 42/46 (91.30%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            AGQIAS+PRTEDCVGCKRCETACPTDFLSIRVYLG ET+RSMGL+Y
Sbjct:   19 AGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGDETSRSMGLAY 64          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: A0A076MEQ3_9VIRU (PsaC (Fragment) n=5 Tax=uncultured phage TaxID=278008 RepID=A0A076MEQ3_9VIRU)

HSP 1 Score: 90.9 bits (224), Expect = 2.760e-23
Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            A QIAS+PRTEDCVGCKRCETACPTDFLSIRVYLG ETTRSMGL+Y
Sbjct:    5 ANQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGDETTRSMGLAY 50          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: S8ELH0_9LAMI (Photosystem I iron-sulfur center n=2 Tax=Viridiplantae TaxID=33090 RepID=S8ELH0_9LAMI)

HSP 1 Score: 90.9 bits (224), Expect = 5.970e-23
Identity = 40/46 (86.96%), Postives = 46/46 (100.00%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            AGQIAS+PRTEDCVGCKRCE+ACPTDFLS+RVYLG+ET+RSMGL+Y
Sbjct:   35 AGQIASSPRTEDCVGCKRCESACPTDFLSVRVYLGSETSRSMGLAY 80          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: A0A4Q3DHR3_9RICK (Photosystem I iron-sulfur center protein PsaC (Fragment) n=1 Tax=Rickettsiaceae bacterium TaxID=2023360 RepID=A0A4Q3DHR3_9RICK)

HSP 1 Score: 89.7 bits (221), Expect = 7.560e-23
Identity = 40/46 (86.96%), Postives = 45/46 (97.83%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            A QIASAPRTEDCVGCKRCE+ACPTDFLS+RVY+G+ETTRSMGL+Y
Sbjct:    3 AEQIASAPRTEDCVGCKRCESACPTDFLSVRVYMGSETTRSMGLAY 48          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: A0A396I272_MEDTR (Photosystem I iron-sulfur center n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A396I272_MEDTR)

HSP 1 Score: 89.7 bits (221), Expect = 1.340e-22
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            A QIASAPRTEDCVGCKRCE+ACPTDFLS+RVYLG ETTRSMGL+Y
Sbjct:   26 AKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLGPETTRSMGLAY 71          
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Match: A0A076MJV4_9VIRU (PsaC (Fragment) n=1 Tax=uncultured phage TaxID=278008 RepID=A0A076MJV4_9VIRU)

HSP 1 Score: 88.2 bits (217), Expect = 3.090e-22
Identity = 41/46 (89.13%), Postives = 44/46 (95.65%), Query Frame = 0
Query:    1 AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY 46
            AGQIA++PRTEDCVG KRCETACPTDFL IRVYLGAETTRSMGL+Y
Sbjct:    3 AGQIAASPRTEDCVGRKRCETACPTDFLGIRVYLGAETTRSMGLAY 48          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig922.17320.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001B8AF93F8.820e-2595.65photosystem I iron-sulfur center protein PsaC n=1 ... [more]
A0A076MD99_9VIRU6.450e-2493.48PsaC (Fragment) n=38 Tax=uncultured phage TaxID=27... [more]
UPI001985260A8.400e-2491.30Photosystem I iron-sulfur center protein PsaC n=1 ... [more]
A0A076MJF2_9VIRU1.900e-2391.30PsaC (Fragment) n=1 Tax=uncultured phage TaxID=278... [more]
A0A0A2A182_PROMR1.930e-2391.30Photosystem I iron-sulfur center n=19 Tax=root Tax... [more]
A0A076MEQ3_9VIRU2.760e-2391.30PsaC (Fragment) n=5 Tax=uncultured phage TaxID=278... [more]
S8ELH0_9LAMI5.970e-2386.96Photosystem I iron-sulfur center n=2 Tax=Viridipla... [more]
A0A4Q3DHR3_9RICK7.560e-2386.96Photosystem I iron-sulfur center protein PsaC (Fra... [more]
A0A396I272_MEDTR1.340e-2289.13Photosystem I iron-sulfur center n=1 Tax=Medicago ... [more]
A0A076MJV4_9VIRU3.090e-2289.13PsaC (Fragment) n=1 Tax=uncultured phage TaxID=278... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.20coord: 1..46
e-value: 7.6E-17
score: 62.6
NoneNo IPR availablePANTHERPTHR24960:SF66coord: 1..46
NoneNo IPR availablePANTHERPTHR24960FAMILY NOT NAMEDcoord: 1..46
NoneNo IPR availableSUPERFAMILY548624Fe-4S ferredoxinscoord: 9..35
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPFAMPF00037Fer4coord: 10..28
e-value: 3.2E-7
score: 29.9
IPR0178964Fe-4S ferredoxin-type, iron-sulphur binding domainPROSITEPS513794FE4S_FER_2coord: 4..33
score: 8.718
IPR0179004Fe-4S ferredoxin, iron-sulphur binding, conserved sitePROSITEPS001984FE4S_FER_1coord: 13..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig922contigE-siliculosus-1a_M_contig922:4513..4653 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig922.17320.1mRNA_E-siliculosus-1a_M_contig922.17320.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig922 4513..4653 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig922.17320.1 ID=prot_E-siliculosus-1a_M_contig922.17320.1|Name=mRNA_E-siliculosus-1a_M_contig922.17320.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=47bp
AGQIASAPRTEDCVGCKRCETACPTDFLSIRVYLGAETTRSMGLSY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0179004Fe4S_Fe_S_CS
IPR0178964Fe4S_Fe-S-bd