prot_E-siliculosus-1a_M_contig92.17287.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig92.17287.1
Unique Name	prot_E-siliculosus-1a_M_contig92.17287.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	104

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: D7FL11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL11_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 1.290e-66
Identity = 100/103 (97.09%), Postives = 102/103 (99.03%), Query Frame = 0

Query:    1 MPIRSWFPNMVMAIISGPSRSRPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTPNKGPRSLPS 103
            MPIRSWFPNMVMA+ISGPSRSRPAQASFKIQP+MTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTPNKGP SLPS
Sbjct:    1 MPIRSWFPNMVMAMISGPSRSRPAQASFKIQPKMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTPNKGPPSLPS 103

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: A0A835YVT8_9STRA (Ribosomal protein L23/L15e core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.210e-33
Identity = 56/87 (64.37%), Postives = 70/87 (80.46%), Query Frame = 0

Query:    1 MPIRSWFPNMVMAIISGPSRSRPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            M ++ WFP+  M +++ P+R RP QA+F++ P+MTK EVKEYL K+Y VPVKKVMTQNF GKRKRI G RSI+ YKRP+FKKAIVT 
Sbjct:    1 MGVKEWFPSFFMQLVTMPTRGRPQQAAFRVSPKMTKLEVKEYLLKVYGVPVKKVMTQNFLGKRKRIQGSRSIISYKRPDFKKAIVTL 87

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: A0A7S3QJC9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJC9_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.140e-24
Identity = 49/89 (55.06%), Postives = 65/89 (73.03%), Query Frame = 0

Query:    1 MPIRSWFPNMVMAI--ISGPSRSRPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            +  R W PNM + +      +++ PA A+F+++P+MTK E+KEYLTKIYN+PVKKV T NF GKRKR MG++ IV YK  +FKKA VTF
Sbjct:    8 LAFRVWMPNMPILLDGAKNATKTAPATATFRVKPKMTKHEIKEYLTKIYNLPVKKVNTANFAGKRKRAMGRQKIVEYKYKDFKKAFVTF 96

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: A0A6U3SB59_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB59_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.280e-23
Identity = 49/87 (56.32%), Postives = 65/87 (74.71%), Query Frame = 0

Query:    3 IRSWFPNMVMAIISG--PSRSRPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            +R W PNM + ++S    + +  A A+F++ P+MTK EVKE+LTKIYN+PV KV TQN+ GKRKR++GKR I  YK  +FKKAIVTF
Sbjct:   11 LRVWMPNMPIVLLSARNATETSAATATFRVLPKMTKHEVKEHLTKIYNLPVAKVNTQNYLGKRKRVVGKRRIAYYKNADFKKAIVTF 97

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: A0A7S4IBC0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IBC0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 9.820e-23
Identity = 48/86 (55.81%), Postives = 61/86 (70.93%), Query Frame = 0

Query:    4 RSWFPNMVMAIISGPS--RSRPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W P M + ++   S   S+ A A F++ P+MTK E+KEYLTKIYN+PVKKV T N+ GKRKR++GKR I  YK  +FKKAIV F
Sbjct:   11 RMWMPTMPITLVKARSANESQSAMAVFRVMPKMTKHEIKEYLTKIYNLPVKKVNTMNYLGKRKRVIGKRGIAYYKYRDFKKAIVKF 96

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: A0A448YYR3_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYR3_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.040e-22
Identity = 45/86 (52.33%), Postives = 64/86 (74.42%), Query Frame = 0

Query:    4 RSWFPNMVMAIISGPSRS--RPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W PNM M ++S  + +  +PA+A+F++ PRMTK E+KEYLTKIY +PV+KV T N+ GKRK + G R ++ YK  +FKKA+V+F
Sbjct:   10 RMWMPNMPMMLVSAKNATARQPARATFRVLPRMTKHEIKEYLTKIYGLPVQKVNTANYLGKRKLVRGSRQVIRYKYADFKKAVVSF 95

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: B8C4N9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C4N9_THAPS)

HSP 1 Score: 92.8 bits (229), Expect = 4.950e-22
Identity = 47/88 (53.41%), Postives = 65/88 (73.86%), Query Frame = 0

Query:    4 RSWFPNMVMAIISGP--SRSRPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFAS 89
            + W P++ + +++    + S PA A F+I P+MTK EV+EYLTKIY++PVK+V TQN+ GKR RI+GKR IV  KRP++KKA V F S
Sbjct:   27 KMWMPSLPLVLLTATHATPSNPATAQFRILPKMTKHEVREYLTKIYDLPVKEVRTQNYLGKRMRIIGKRHIVYAKRPDYKKAFVVFGS 114

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: A0A1E7FSR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSR6_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.050e-21
Identity = 43/86 (50.00%), Postives = 64/86 (74.42%), Query Frame = 0

Query:    4 RSWFPNMVMAIISGPSRS--RPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W PNM M ++S  + +  +PA+A+F++ PRMTK E+KEYLTKIY +PV++V T N+ GKRK + G  +++ YK  +FKKA+V+F
Sbjct:   13 RMWMPNMPMLMVSAKNATARQPARATFRVLPRMTKHEIKEYLTKIYGLPVRQVNTSNYMGKRKIVRGSSAVIRYKYADFKKAVVSF 98

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: B7FPJ8_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FPJ8_PHATC)

HSP 1 Score: 91.3 bits (225), Expect = 2.100e-21
Identity = 47/86 (54.65%), Postives = 61/86 (70.93%), Query Frame = 0

Query:    4 RSWFPNMVMAIISGPSRSR--PAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W P+M + ++S  S +   PA A F+  PRMTK E+KEYLTKIY++PVKKV T N+EGKRKR++    I  +K  NFKKA+VTF
Sbjct:   16 RMWMPSMPLTMVSARSATANGPAFAIFRTVPRMTKHEIKEYLTKIYDLPVKKVNTMNYEGKRKRLISNSGIAYFKYKNFKKAVVTF 101

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Match: K0TJH6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TJH6_THAOC)

HSP 1 Score: 90.9 bits (224), Expect = 2.600e-21
Identity = 46/86 (53.49%), Postives = 62/86 (72.09%), Query Frame = 0

Query:    4 RSWFPNMVMAIISGPSRS--RPAQASFKIQPRMTKWEVKEYLTKIYNVPVKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTF 87
            R W P+M + ++   + +   PAQA+F++ P+MTK EVKEYLTKIY +PV KV TQN+ GKR R+MGK  I   KRP++KKA V+F
Sbjct:   28 RMWMPHMPLVLLDAQNATLDTPAQATFRVLPKMTKHEVKEYLTKIYGLPVVKVRTQNYMGKRIRVMGKTHIAYGKRPDYKKAFVSF 113

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig92.17287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FL11_ECTSI	1.290e-66	97.09	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YVT8_9STRA	2.210e-33	64.37	Ribosomal protein L23/L15e core domain-containing ...	[more]
A0A7S3QJC9_9STRA	1.140e-24	55.06	Hypothetical protein n=1 Tax=Chaetoceros debilis T...	[more]
A0A6U3SB59_9STRA	1.280e-23	56.32	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
A0A7S4IBC0_9STRA	9.820e-23	55.81	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A448YYR3_9STRA	1.040e-22	52.33	Uncharacterized protein n=1 Tax=Pseudo-nitzschia m...	[more]
B8C4N9_THAPS	4.950e-22	53.41	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
A0A1E7FSR6_9STRA	2.050e-21	50.00	Uncharacterized protein n=1 Tax=Fragilariopsis cyl...	[more]
B7FPJ8_PHATC	2.100e-21	54.65	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
K0TJH6_THAOC	2.600e-21	53.49	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013025	Ribosomal protein L25/L23	PFAM	PF00276	Ribosomal_L23	coord: 24..89 e-value: 1.0E-16 score: 61.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..101 e-value: 5.1E-25 score: 90.3
None	No IPR available	PANTHER	PTHR12059	RIBOSOMAL PROTEIN L23-RELATED	coord: 4..94
None	No IPR available	PANTHER	PTHR12059:SF5	39S RIBOSOMAL PROTEIN L23, MITOCHONDRIAL	coord: 4..94
IPR012678	Ribosomal protein L23/L15e core domain superfamily	SUPERFAMILY	54189	Ribosomal proteins S24e, L23 and L15e	coord: 23..93

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig92	contig	E-siliculosus-1a_M_contig92:416449..418527 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig92.17287.1	mRNA_E-siliculosus-1a_M_contig92.17287.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig92 415994..418527 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17287.1 ID=prot_E-siliculosus-1a_M_contig92.17287.1|Name=mRNA_E-siliculosus-1a_M_contig92.17287.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=104bp
MPIRSWFPNMVMAIISGPSRSRPAQASFKIQPRMTKWEVKEYLTKIYNVP
VKKVMTQNFEGKRKRIMGKRSIVPYKRPNFKKAIVTFASPQWTPNKGPRS
LPS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012678	Ribosomal_L23/L15e_core_dom_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR013025	Ribosomal_L25/23