prot_E-siliculosus-1a_M_contig92.17283.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17283.1
Unique Nameprot_E-siliculosus-1a_M_contig92.17283.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length250
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: D7FL07_ECTSI (DUF2012 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL07_ECTSI)

HSP 1 Score: 326 bits (835), Expect = 1.020e-110
Identity = 167/169 (98.82%), Postives = 168/169 (99.41%), Query Frame = 0
Query:   37 MPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKVDDMTGIIAIEYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAGQAIPQ 205
            MPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDV AGVYLLEVLSPNFHFSAMKIKVDDMTGIIAIEYKYPGAPRKEAIHPL+LTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAGQAIPQ
Sbjct:    1 MPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVAAGVYLLEVLSPNFHFSAMKIKVDDMTGIIAIEYKYPGAPRKEAIHPLLLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAGQAIPQ 169          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: A0A6H5JWY4_9PHAE (DUF2012 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWY4_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 5.260e-58
Identity = 93/99 (93.94%), Postives = 93/99 (93.94%), Query Frame = 0
Query:    1 METISRWKGLATVVLGLAWSMCWSACAAEEILGTLAMPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKVDDMTGI 99
            ME IS WK L TVVLGLAWSMCWS CAAEEILGTLAMPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDV AGVYLLEVLSPNFHFSAMKIKVDDMTGI
Sbjct:    1 MERISPWKRLVTVVLGLAWSMCWSLCAAEEILGTLAMPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVAAGVYLLEVLSPNFHFSAMKIKVDDMTGI 99          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: A0A6H5JS89_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS89_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 2.080e-35
Identity = 70/71 (98.59%), Postives = 71/71 (100.00%), Query Frame = 0
Query:  135 MKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAGQAIPQ 205
            MKVGGMFKSPMTIIMV+SMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAGQAIPQ
Sbjct:    1 MKVGGMFKSPMTIIMVISMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAGQAIPQ 71          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: A0A836CIT1_9STRA (DUF2012 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT1_9STRA)

HSP 1 Score: 130 bits (328), Expect = 9.680e-34
Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 0
Query:   26 CAAEEILGTLAMPDRS-VVPTTKVVLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKVDDMT---GIIAIEYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKV-GGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQK 179
            CAA  I G L++P+ +  + TT++ LNGG+ S+ +   G+F F  V  GVY+L+V S ++HFS MKIKV +     GI A+E+ YPGAP+K+A HPL L AH ++ +FE RE   V   M ++PM IIM L+M  M  +PK+M  +DPE L++ + +QK
Sbjct:   23 CAAVSIQGKLSLPEGAGPLETTRLTLNGGERSTYSQASGAFVFHGVGPGVYVLDVQSTSYHFSQMKIKVPEEGEGGGIQALEFVYPGAPKKDAPHPLALAAHAQYAYFEPREAFNVLTAMRRNPMLIIMALAMGAMALMPKLMEGMDPELLKQAQAEQK 181          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: A0A7S0CGJ2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGJ2_9STRA)

HSP 1 Score: 126 bits (316), Expect = 1.440e-32
Identity = 66/147 (44.90%), Postives = 98/147 (66.67%), Query Frame = 0
Query:   49 VLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKV------DDMTGIIAIEYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLS 189
            +LN G++S+ T RDG+F   +V  GV+LL+V S    FS +KI++      DD  G+  IEY YPGA ++   HPL+LTAH ++ +FE R+G  +G +FK+PM I+M+ S+ +MFF+PKMM NLD EQ E+++ Q +   + T  LS
Sbjct:    1 MLNDGEYSTYTQRDGAFVLYNVLPGVHLLDVQSHTHLFSQVKIQLLEATETDDEMGLKCIEYAYPGASKQAIPHPLILTAHAQYQYFEPRQGFSIGTIFKNPMLIMMLFSVGLMFFMPKMMENLDDEQKEQMQKQMELQSDPTKMLS 147          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: A0A6V2I1F6_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2I1F6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 2.220e-32
Identity = 64/155 (41.29%), Postives = 99/155 (63.87%), Query Frame = 0
Query:   25 ACAAEEILGTLAMPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKV--DDMTGIIAIEYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQ 177
            A     I G L +PD S + TT++ LN G+ ++ T  DG+F F  V  GV+LL+V S  +HFS +K+++  + M     IEY +PGAP+  A +P++LTAH K+ +FEK++G     + K+PM ++M+ S+ +MF +P MM NLDPE  E ++ Q
Sbjct:   24 AAPTAPIQGQLLLPDGSDLNTTRITLNDGEQTTYTRPDGTFTFYHVPPGVHLLDVQSQFYHFSQVKVQLLEESMDAPKCIEYAFPGAPKTVAPYPILLTAHAKYEYFEKQQGFAFSSILKNPMMLMMIFSVGLMFVMPMMMDNLDPEDKERMQKQ 178          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: A0A6U1YD74_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A6U1YD74_TRICV)

HSP 1 Score: 124 bits (310), Expect = 7.680e-31
Identity = 65/162 (40.12%), Postives = 101/162 (62.35%), Query Frame = 0
Query:   30 EILGTLAMPDRSVVPTTKVVLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKV--DDMTGIIAIEYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLS 189
             I G L +PD   + +T + LN GQ+S+ T   G F F  V  GV++LE  SP  HFS +KI++  + M     IEY YPGAP++   HPL+LTAH ++ +FEKR+G  +  + ++PM ++M+ S+ +M  +PKMM  LD +Q E++K Q +  Q+ +  L+
Sbjct:   52 SIKGRLRLPDDKPLNSTLITLNDGQYSTYTQAHGDFVFHAVGPGVHVLEAHSPLHHFSQVKIQLLSESMEAPKCIEYVYPGAPKQAIPHPLLLTAHARYEYFEKRQGFSLFSILRNPMMLMMMFSVGLMLLMPKMMEGLDDDQKEQMKRQMEMQQDPSKMLT 213          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: A0A7S2P968_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P968_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.950e-30
Identity = 66/163 (40.49%), Postives = 102/163 (62.58%), Query Frame = 0
Query:   30 EILGTLAMPDRSV-VPTTKVVLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKV--DDMTGIIAIEYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLS 189
             I G L +PD +  + +T++ LN G  ++ T  +G F F  V  GV+LL+V S   HFS +KI++  D M     IEY YPGAP++   HPL LTAH  + ++EKR+G  +  +FK+PM ++M+ +  M+F +PKMM ++DPEQ E ++ Q +  Q+ +  LS
Sbjct:   33 SIQGRLRLPDSAASLNSTRITLNDGSFTTYTQPNGDFIFHRVPPGVHLLDVQSRQHHFSQVKIQLLEDAMDSPKCIEYVYPGAPKQAMPHPLELTAHASYEYYEKRQGFSIFSIFKNPMILMMLFTGGMLFLMPKMMEDMDPEQKEMMQKQMEFQQDPSKMLS 195          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: F0Y411_AURAN (DUF2012 domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y411_AURAN)

HSP 1 Score: 117 bits (292), Expect = 1.910e-29
Identity = 58/137 (42.34%), Postives = 95/137 (69.34%), Query Frame = 0
Query:   43 VPTTKVVLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKVDDMTG--IIAIEYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQ 177
            +PTT+VVLNGG++ + T  DG F F DV  GVYLL+VLS ++ FS +K+ +    G  I  +EY+YPGA ++   +PL L AH K  +FE RE   +  +F++PM ++++ + A++  +PKMM N+DPE+++++++Q
Sbjct:    3 LPTTEVVLNGGEYRTYTRPDGGFVFHDVEPGVYLLDVLSVDYIFSQVKLNLPKAGGEAIRCLEYRYPGAAKQPMAYPLELAAHVKQQYFEVRETPGLHTLFRNPMMLMLLFTGAVVVLMPKMMDNMDPEEMKKMQEQ 139          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Match: A0A8J2X121_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X121_9STRA)

HSP 1 Score: 117 bits (293), Expect = 1.000e-28
Identity = 59/134 (44.03%), Postives = 91/134 (67.91%), Query Frame = 0
Query:   45 TTKVVLNGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKVDDMTGIIAI-EYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKVGGMFKSPMTIIMVLSMAMMFFLPKMMANLDPEQLEEIKDQ 177
            TT+V LNGG+H + T  DGSF F DV  GVYLL+VLS  + FS  K+ + +  G I + EY YPGA ++ A +P+ L  H K  +F+KR+   +  +F++PM ++M  +M M+FF+PK+M +LDPE+ + +++Q
Sbjct:   41 TTEVTLNGGEHRAFTRPDGSFRFTDVAPGVYLLDVLSTEYLFSQFKLNLPEDDGEIRVLEYMYPGANKRAAAYPVDLRPHVKLEYFDKRQQPGLHTLFRNPMLLMMGFTMLMVFFMPKLMDSLDPEERKRMEEQ 174          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17283.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL07_ECTSI1.020e-11098.82DUF2012 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JWY4_9PHAE5.260e-5893.94DUF2012 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JS89_9PHAE2.080e-3598.59Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A836CIT1_9STRA9.680e-3445.28DUF2012 domain-containing protein n=1 Tax=Tribonem... [more]
A0A7S0CGJ2_9STRA1.440e-3244.90Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A6V2I1F6_9STRA2.220e-3241.29Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A6U1YD74_TRICV7.680e-3140.12Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2P968_9STRA2.950e-3040.49Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
F0Y411_AURAN1.910e-2942.34DUF2012 domain-containing protein (Fragment) n=1 T... [more]
A0A8J2X121_9STRA1.000e-2844.03Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019008Domain of unknown function DUF2012PFAMPF09430DUF2012coord: 41..148
e-value: 9.2E-20
score: 71.0
NoneNo IPR availablePANTHERPTHR13605:SF4ER MEMBRANE PROTEIN COMPLEX SUBUNIT 7coord: 29..201
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.833
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
IPR039163ER membrane protein complex subunit 7PANTHERPTHR13605UNCHARACTERIZEDcoord: 29..201
IPR013784Carbohydrate-binding-like foldSUPERFAMILY49452Starch-binding domain-likecoord: 30..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:387325..390722 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17283.1mRNA_E-siliculosus-1a_M_contig92.17283.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig92 387325..391400 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17283.1 ID=prot_E-siliculosus-1a_M_contig92.17283.1|Name=mRNA_E-siliculosus-1a_M_contig92.17283.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=250bp
METISRWKGLATVVLGLAWSMCWSACAAEEILGTLAMPDRSVVPTTKVVL
NGGQHSSLTARDGSFAFRDVTAGVYLLEVLSPNFHFSAMKIKVDDMTGII
AIEYKYPGAPRKEAIHPLVLTAHTKWNHFEKREGMKVGGMFKSPMTIIMV
LSMAMMFFLPKMMANLDPEQLEEIKDQQKAVQESTANLSFSSLLSNALAG
QAIPQQQQQQQQQQGGSATSVQRSGGGASAGSGSTSRSGGGSNKKKHRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013784Carb-bd-like_fold
IPR039163EMC7
IPR019008DUF2012