prot_E-siliculosus-1a_M_contig92.17276.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig92.17276.1
Unique Name	prot_E-siliculosus-1a_M_contig92.17276.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	85

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: D7FKY9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKY9_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 3.800e-41
Identity = 81/84 (96.43%), Postives = 81/84 (96.43%), Query Frame = 0

Query:    1 MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQARRARIEARRRARLSNGNNGSSPSGGDGRGE 84
            MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQARRARIEARRRARLSN  NGSSPSGG GRGE
Sbjct:    1 MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQARRARIEARRRARLSN--NGSSPSGGGGRGE 82

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: W7U0Z4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Z4_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 5.120e-11
Identity = 35/62 (56.45%), Postives = 44/62 (70.97%), Query Frame = 0

Query:    6 FATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQARRARIEARRRARL 67
            F  ++++ VPA  VVGA MELFMLNTGFYDVALRKEAERR E   E +    ++E  +R +L
Sbjct:    4 FLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKMERTKRRQL 65

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: K8Z8J1_NANGC (Uncharacterized protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8J1_NANGC)

HSP 1 Score: 62.8 bits (151), Expect = 6.040e-11
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 0

Query:    6 FATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQARRARIEARRRARL 67
            F  ++++ VPA  VVGA MELFMLNTGFYDVALRKEAERR E   E +    ++E+ +R +L
Sbjct:   39 FLEIVVRLVPACMVVGASMELFMLNTGFYDVALRKEAERRVEQAREREELSRKMESTKRRQL 100

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: A0A482S9C6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S9C6_9ARCH)

HSP 1 Score: 53.5 bits (127), Expect = 1.520e-7
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 0

Query:    1 MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEEYQARRARIEA 61
            MSS+     + + VP  FV+GAGMELFM+ TGFY +  RKEAERR +   + + R+AR+ A
Sbjct:    1 MSSNIIFQDLKRIVPICFVLGAGMELFMIKTGFYTIVTRKEAERRLDLWRQEEGRKARLRA 61

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: A0A6G0WTV1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WTV1_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 3.410e-7
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0

Query:    1 MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEEE 51
            M+ +     +++ VPA FVVGAGMELFM+ TGFYD+  + EAE RA+ + E
Sbjct:    1 MAQASLRPFLVKLVPACFVVGAGMELFMVKTGFYDIVTKNEAEIRAQKKAE 51

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: A0A485L2A5_9STRA (Aste57867_14693 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2A5_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 6.680e-7
Identity = 24/38 (63.16%), Postives = 31/38 (81.58%), Query Frame = 0

Query:   10 MLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAE 47
            +++ VPA FVVGAGMELFM+ TGFYD+  + EAE RA+
Sbjct:   12 LIKLVPACFVVGAGMELFMVKTGFYDIVTKNEAEIRAQ 49

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: A0A1V9ZUD2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZUD2_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 2.890e-6
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0

Query:    4 SKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAE----RRAEAEE 50
            +  A ++ + VPA FV+GAGME+FM+ TGFYD+  + EAE    +RAE EE
Sbjct:    8 ASIAPLLRKLVPACFVIGAGMEVFMVKTGFYDIVTKNEAEIRAIKRAEREE 58

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: A0A836CCA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCA3_9STRA)

HSP 1 Score: 50.4 bits (119), Expect = 3.000e-6
Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0

Query:   16 ASFVVGAGMELFMLNTGFYDVALRKEAER 44
            A+FV GAGMELFM+ TGFYDVA RKEAER
Sbjct:   15 AAFVTGAGMELFMIKTGFYDVATRKEAER 43

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: W4GX85_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GX85_9STRA)

HSP 1 Score: 48.1 bits (113), Expect = 1.570e-5
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0

Query:   10 MLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAE 47
            +++ VP  FVVGAG+ELFM+ TGFYD+  + EAE RA+
Sbjct:   11 LVKLVPVCFVVGAGVELFMVKTGFYDIVTKNEAEVRAQ 48

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BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Match: A0A067BUH6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BUH6_SAPPC)

HSP 1 Score: 48.1 bits (113), Expect = 1.680e-5
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0

Query:   14 VPASFVVGAGMELFMLNTGFYDVALRKEAERRA--EAE-EEYQARRARIEA 61
            VPA FV+G GME+FM+ TGFYD+  R EAE RA   AE +EY  R+A+ EA
Sbjct:   18 VPACFVIGMGMEVFMVKTGFYDIVARNEAEIRAIKRAERDEYLRRKAQDEA 68

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig92.17276.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D7FKY9_ECTSI	3.800e-41	96.43	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
W7U0Z4_9STRA	5.120e-11	56.45	Uncharacterized protein n=1 Tax=Nannochloropsis ga...	[more]
K8Z8J1_NANGC	6.040e-11	56.45	Uncharacterized protein (Fragment) n=1 Tax=Nannoch...	[more]
A0A482S9C6_9ARCH	1.520e-7	49.18	Uncharacterized protein n=1 Tax=archaeon TaxID=190...	[more]
A0A6G0WTV1_9STRA	3.410e-7	50.98	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A485L2A5_9STRA	6.680e-7	63.16	Aste57867_14693 protein n=1 Tax=Aphanomyces stella...	[more]
A0A1V9ZUD2_9STRA	2.890e-6	50.98	Uncharacterized protein n=1 Tax=Achlya hypogyna Ta...	[more]
A0A836CCA3_9STRA	3.000e-6	82.76	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
W4GX85_9STRA	1.570e-5	57.89	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A067BUH6_SAPPC	1.680e-5	58.82	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 38..58
None	No IPR available	PANTHER	PTHR36377	FAMILY NOT NAMED	coord: 3..65
None	No IPR available	PANTHER	PTHR36377:SF1	DNA MISMATCH REPAIR PROTEIN	coord: 3..65
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..84
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	TMHMM	TMhelix		coord: 7..29

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig92	contig	E-siliculosus-1a_M_contig92:296852..299210 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig92.17276.1	mRNA_E-siliculosus-1a_M_contig92.17276.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig92 295350..299210 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17276.1 ID=prot_E-siliculosus-1a_M_contig92.17276.1|Name=mRNA_E-siliculosus-1a_M_contig92.17276.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=85bp
MSSSKFATVMLQFVPASFVVGAGMELFMLNTGFYDVALRKEAERRAEAEE
EYQARRARIEARRRARLSNGNNGSSPSGGDGRGE*