prot_E-siliculosus-1a_M_contig92.17269.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17269.1
Unique Nameprot_E-siliculosus-1a_M_contig92.17269.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length245
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17269.1 vs. uniprot
Match: A0A6H5JXH9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH9_9PHAE)

HSP 1 Score: 395 bits (1015), Expect = 1.340e-137
Identity = 215/247 (87.04%), Postives = 218/247 (88.26%), Query Frame = 0
Query:    1 MLHLGKFFRGTVPLLACLCVACTAFIPVPMRFPSRGQQAARSARPSTTIAGPGSPTQQATTPTAGTRRRPISVSCCGEGAGGEGVEVAVDSAAAPGGAAAAA---AEVDPFRPTRASMSPLVINALVSVLFKPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRSMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLQG 244
            MLHLG FFRGTVPLLACLCVACTAFIPVP RFPSRGQQ A SARPSTTIAGPGSPTQQATTPTAGTRRRPISV CCGEGAGGE                      AE+DPFRPTRASMSPLVINALVSVLF+PDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELR MLATAVERTPSIAKYGMFSDYGMS+NVENDPLAQMNQAECLLALYILHKENAG AAVDFLDAERLDVLQG
Sbjct:    1 MLHLGLFFRGTVPLLACLCVACTAFIPVPTRFPSRGQQVASSARPSTTIAGPGSPTQQATTPTAGTRRRPISVPCCGEGAGGEXXXXXXXXXXXXXXXXXXXXXXAEMDPFRPTRASMSPLVINALVSVLFRPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSKNVENDPLAQMNQAECLLALYILHKENAGVAAVDFLDAERLDVLQG 247          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17269.1 vs. uniprot
Match: D7FRB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRB2_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 1.590e-80
Identity = 128/130 (98.46%), Postives = 128/130 (98.46%), Query Frame = 0
Query:  115 MSPLVINALVSVLFKPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRSMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLQG 244
            MSPLVINALVSVLFKPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELR MLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVL G
Sbjct:    1 MSPLVINALVSVLFKPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRFMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLAG 130          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17269.1 vs. uniprot
Match: A0A835ZBX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX3_9STRA)

HSP 1 Score: 135 bits (339), Expect = 4.500e-36
Identity = 80/139 (57.55%), Postives = 97/139 (69.78%), Query Frame = 0
Query:  106 DPFRPTRASMSPLVINALVSVLFKPDTEATGAAAAALERRSDWEFTEEEERAVTSRVCGVASHLTELRSMLATAVERTPSIAKYGMFSDYGMSENVENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLQG 244
            DPFRP +AS+ PLVINAL  VLFK D  A  A +A L+ R D   T EE+  V SRV GV     ELR  LA+AV R   IAKYGM  DYG+SE++E++PLAQ+N AECLLALY+LH+E  G     F+DAE+LDVL+G
Sbjct:   42 DPFRPAKASIDPLVINALQRVLFK-DEPADAAVSALLQSRDD-ALTPEEDALVRSRVHGVVHSAQELRFTLASAVSRHAFIAKYGMQGDYGVSEDLESNPLAQLNHAECLLALYMLHREGRGEEPA-FVDAEKLDVLRG 177          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17269.1 vs. uniprot
Match: A0A4D9CRF9_9STRA (SAM_MT_RSMB_NOP domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRF9_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 4.140e-9
Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 0
Query:  112 RASMSPLVINALVSVLFKPDTEATGAAAAALER----------RSDWE---FTEEEERAVTSRVCGVASHLTELRSMLATAVERTPSIAK-YG-MFSDYGMSENVENDPLAQMNQAECLLALYILHKENAG-GAA--VDFLDAERLDVL 242
            RA++ P+VIN LV++L      +  +  A  ER          R+D      T EE R + +RV GV      L  +L  AV ++  + + +G   +D+G+  +   DP+  +N+AECLLALY+L +E  G G A  VDFLD++RL+VL
Sbjct:  140 RAAVDPVVINILVTILSSSAASSPPSTLADAERIANKAIRKRMRTDAPESALTAEERRLIYARVYGVEVLRARLSFLLEHAVAQSSLVGRRFGPTLADFGLPMDASGDPMLVVNRAECLLALYMLTEEVDGEGRAPRVDFLDSDRLEVL 288          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17269.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JXH9_9PHAE1.340e-13787.04Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FRB2_ECTSI1.590e-8098.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZBX3_9STRA4.500e-3657.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CRF9_9STRA4.140e-936.24SAM_MT_RSMB_NOP domain-containing protein n=3 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..244
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:208278..210360 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17269.1mRNA_E-siliculosus-1a_M_contig92.17269.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig92 207218..210459 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17269.1 ID=prot_E-siliculosus-1a_M_contig92.17269.1|Name=mRNA_E-siliculosus-1a_M_contig92.17269.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=245bp
MLHLGKFFRGTVPLLACLCVACTAFIPVPMRFPSRGQQAARSARPSTTIA
GPGSPTQQATTPTAGTRRRPISVSCCGEGAGGEGVEVAVDSAAAPGGAAA
AAAEVDPFRPTRASMSPLVINALVSVLFKPDTEATGAAAAALERRSDWEF
TEEEERAVTSRVCGVASHLTELRSMLATAVERTPSIAKYGMFSDYGMSEN
VENDPLAQMNQAECLLALYILHKENAGGAAVDFLDAERLDVLQG*
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