prot_E-siliculosus-1a_M_contig92.17253.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17253.1
Unique Nameprot_E-siliculosus-1a_M_contig92.17253.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length282
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: D7FR96_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FR96_ECTSI)

HSP 1 Score: 402 bits (1034), Expect = 6.170e-140
Identity = 197/209 (94.26%), Postives = 200/209 (95.69%), Query Frame = 0
Query:   18 MRMLPVSAFHTTAVWAARYSRLLGLPSCLLKPPRRGDISLFKTTAQRDKHMASIQDGRGGHNRGVAAMPKVDGGVACTATLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATHPVNRLGEEILGV 226
            MRM PVSAFHTTAVWAARYSRLLG+PSCLLKPPRRGDISLFKTTAQRDKHMASIQDGRGGH RG+ AMPKVDGGVACTATLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGAT PVNRL   +  V
Sbjct:    1 MRMPPVSAFHTTAVWAARYSRLLGIPSCLLKPPRRGDISLFKTTAQRDKHMASIQDGRGGHTRGMTAMPKVDGGVACTATLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATQPVNRLDVHLTAV 209          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: A0A7S2GEU5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEU5_9STRA)

HSP 1 Score: 148 bits (373), Expect = 2.260e-40
Identity = 71/118 (60.17%), Postives = 83/118 (70.34%), Query Frame = 0
Query:  102 VASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATHPVNRL 219
            V +PE+ME  GA     ++ GD++ L GDLG GKTCFARGFV+ARVGDP L VTSPSYLLD +YEV DEDL +HHMDLYRL G      L +   F  C+CL+EWPDRLG   P  RL
Sbjct:   49 VNTPEDMERFGATLARGSTAGDIIFLTGDLGAGKTCFARGFVKARVGDPYLRVTSPSYLLDQSYEVEDEDLIIHHMDLYRLSGTIGTVPLDLETKFRQCICLLEWPDRLGTDIPEERL 166          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: A0A835Z1V9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1V9_9STRA)

HSP 1 Score: 145 bits (367), Expect = 8.600e-39
Identity = 74/125 (59.20%), Postives = 83/125 (66.40%), Query Frame = 0
Query:   95 TATLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATHPVNRL 219
            T T  + + SPE ME+ G      A  GDV+LL GDLGTGKTCF+RGF+R    DP L VTSPSYLLDNTYE  D  + +HHMDLYRL G  DL VL IP +  T VCLVEWPDRL    P  RL
Sbjct:   97 TYTSSLMIRSPESMEQLGQLLARGAEAGDVILLIGDLGTGKTCFSRGFIRECAEDPDLLVTSPSYLLDNTYEATDGTM-VHHMDLYRLSGADDLHVLNIPEILSTSVCLVEWPDRLQHLTPSVRL 220          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: A0A7S2EJ05_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EJ05_TRICV)

HSP 1 Score: 138 bits (347), Expect = 1.180e-36
Identity = 67/123 (54.47%), Postives = 83/123 (67.48%), Query Frame = 0
Query:   97 TLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATHPVNRL 219
            TL +SV +PE+ME+ GA      SGGDV+LL GDLG GKTC +RGFVRAR G  G+ VTSP+YLL N+Y       T++HMDLYRL+GG DL  L +       +CL+EWP RLG + P  RL
Sbjct:    3 TLTLSVPTPEDMEDVGAVLSVGTSGGDVILLGGDLGAGKTCLSRGFVRARTGMEGMRVTSPTYLLSNSYPADGGRTTIYHMDLYRLKGGEDLEPLDMAKTLTDGICLIEWPSRLGESLPPARL 125          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: A0A7S2XNM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XNM5_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.080e-33
Identity = 65/123 (52.85%), Postives = 80/123 (65.04%), Query Frame = 0
Query:   97 TLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETCVCLVEWPDRLGATHPVNRL 219
            +L + + +PE+ME+ GA        GD +LL GDLG GKTC ARGFVRAR G   ++VTSP+YLL NTYE  D  L +HHMDLYRL G  DL  L +  V   C+ L+EWP RLG+  P  RL
Sbjct:   87 SLCLDIPTPEDMEDLGAVLSMGTGPGDSILLKGDLGAGKTCLARGFVRARTGMADISVTSPTYLLSNTYEADDGALLIHHMDLYRLSGDKDLEPLNMNYVLSNCLSLIEWPSRLGSLTPTVRL 209          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: A0A7S4SUD7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SUD7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 5.230e-33
Identity = 66/124 (53.23%), Postives = 82/124 (66.13%), Query Frame = 0
Query:   97 TLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGT-DLRVLGIPGVFETCVCLVEWPDRLGATHPVNRL 219
            +L++S+ + E+ME+ GA       GGD +LL GDLG GKTCF+RGFVRAR G   L VTSP+YLL NTYE  D +  +HHMDLYRL G   DL  L +  V   C+ L+EWP RLG + P  RL
Sbjct:  186 SLQLSIPTSEDMEDVGAIISMGTKGGDTILLDGDLGAGKTCFSRGFVRARTGYIDLRVTSPTYLLSNTYEADDGNTIIHHMDLYRLSGNKEDLEPLDMEHVLTKCISLIEWPSRLGDSAPPERL 309          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: K0S9V1_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S9V1_THAOC)

HSP 1 Score: 128 bits (321), Expect = 4.380e-32
Identity = 67/124 (54.03%), Postives = 86/124 (69.35%), Query Frame = 0
Query:   97 TLEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQG-GTDLRVLGIPGVFETCVCLVEWPDRLGATHPVNRL 219
            +LE+++ +PE+ME+ G     ++  GDV+LL GDLG GKTCF+RGFVRA+ G P   VTSP+YLL N Y V D +L ++HMDLYRL G G DL  L +  VFE  + L+EWP RL AT P  RL
Sbjct:   73 SLELTIPTPEDMEDIGGLLSVNSLPGDVILLDGDLGAGKTCFSRGFVRAKTGLPDERVTSPTYLLSNAYSV-DSNLKVYHMDLYRLSGNGDDLAPLDLENVFENGISLIEWPSRL-ATKPETRL 194          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: A0A7S2LPC8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LPC8_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.620e-29
Identity = 64/127 (50.39%), Postives = 79/127 (62.20%), Query Frame = 0
Query:   98 LEVSVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRL--QGGTDLRVLGIPGVFETCVCLVEWPDRLGATH---PVNRL 219
            L V + SPE ME  GA    D+  GDV+ L GDLG GKTCF+RGFVR RV  P L VTSP++LL NTY    +++ +HHMDLYRL      +L  L +P V E C+ ++EWP RL       P NRL
Sbjct:  105 LHVKIESPEIMESLGAALAKDSVPGDVIFLDGDLGAGKTCFSRGFVRERVQRPRLRVTSPTFLLSNTYFCPQDEVEVHHMDLYRLFTNSKEELEPLDLPRVMEECISIIEWPSRLACYSDMIPPNRL 231          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: A0A7S3M7Y0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M7Y0_9STRA)

HSP 1 Score: 114 bits (285), Expect = 5.060e-28
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 0
Query:  122 GDVVLLWGDLGTGKTCFARGFVRARVGDPGLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGG-TDLRVLGIPGVFETCVCLVEWPDRL 210
            GDV+LL GDLG GKT  +RG ++A+  DP + VTSPSYLLDNTY   + D  +HHMDLYRL  G T++ +LGIP +F++ +CLVEWP+RL
Sbjct:   17 GDVLLLQGDLGAGKTTLSRGIIQAKFRDPSMVVTSPSYLLDNTYRYGENDY-IHHMDLYRLPVGYTEMGILGIPSIFDSALCLVEWPNRL 105          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Match: W7T2V7_9STRA (Uncharacterized domain UPF0079, ATPase bacteria n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2V7_9STRA)

HSP 1 Score: 113 bits (283), Expect = 8.840e-26
Identity = 67/142 (47.18%), Postives = 82/142 (57.75%), Query Frame = 0
Query:   93 ACTATLEVSVASPEEMEETG-AFFGADASGGDVVLLWGDLGTGKTCFARGFVRARV---------GDPGLAVTSPSYLLDNTYEVAD----EDLTLHHMDLYRLQGGT-DLRVLGIPGVFETCVCLVEWPDRLGATHPVNRL 219
            A  +T   S  SPEEME  G   + A  + G  V L+GDLGTGKT  ARGF++A           G   + VTSPSYLLDN Y+  D    +   +HHMDLYRL   T DL++LGIP V    +CL+EWPDRLG   P  R+
Sbjct:  156 ATPSTYTCSATSPEEMERIGEGLWEAGLAVGHTVFLYGDLGTGKTTLARGFIQAATAGAEAGRGEGGKEVMVTSPSYLLDNVYQAFDAETGDSFPVHHMDLYRLSTETHDLKILGIPAVLVEGLCLIEWPDRLGIHTPSTRV 297          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17253.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FR96_ECTSI6.170e-14094.26Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2GEU5_9STRA2.260e-4060.17Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A835Z1V9_9STRA8.600e-3959.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2EJ05_TRICV1.180e-3654.47Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A7S2XNM5_9STRA1.080e-3352.85Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S4SUD7_9STRA5.230e-3353.23Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
K0S9V1_THAOC4.380e-3254.03Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2LPC8_9STRA1.620e-2950.39Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S3M7Y0_9STRA5.060e-2858.89Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
W7T2V7_9STRA8.840e-2647.18Uncharacterized domain UPF0079, ATPase bacteria n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003442tRNA threonylcarbamoyl adenosine modification protein TsaETIGRFAMTIGR00150TIGR00150coord: 107..212
e-value: 1.7E-19
score: 67.9
IPR003442tRNA threonylcarbamoyl adenosine modification protein TsaEPFAMPF02367TsaEcoord: 103..218
e-value: 1.2E-25
score: 89.9
NoneNo IPR availableGENE3D3.40.50.300coord: 96..233
e-value: 4.7E-26
score: 93.1
NoneNo IPR availablePANTHERPTHR33540:SF2TRNA THREONYLCARBAMOYLADENOSINE BIOSYNTHESIS PROTEIN TSAEcoord: 96..219
NoneNo IPR availablePANTHERPTHR33540FAMILY NOT NAMEDcoord: 96..219
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 120..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:112547..114136 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17253.1mRNA_E-siliculosus-1a_M_contig92.17253.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig92 112453..114172 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17253.1 ID=prot_E-siliculosus-1a_M_contig92.17253.1|Name=mRNA_E-siliculosus-1a_M_contig92.17253.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=282bp
MNLRSYIAYLNLVVHCSMRMLPVSAFHTTAVWAARYSRLLGLPSCLLKPP
RRGDISLFKTTAQRDKHMASIQDGRGGHNRGVAAMPKVDGGVACTATLEV
SVASPEEMEETGAFFGADASGGDVVLLWGDLGTGKTCFARGFVRARVGDP
GLAVTSPSYLLDNTYEVADEDLTLHHMDLYRLQGGTDLRVLGIPGVFETC
VCLVEWPDRLGATHPVNRLGEEILGVRHNVTSVCLPFLPTLHTRIRISAR
VKTRGSKCFQSTNDSRSVCDNHFFAARPAPF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003442T6A_TsaE