prot_E-siliculosus-1a_M_contig92.17245.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig92.17245.1
Unique Nameprot_E-siliculosus-1a_M_contig92.17245.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length859
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: D7FYM3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM3_ECTSI)

HSP 1 Score: 932 bits (2410), Expect = 0.000e+0
Identity = 494/507 (97.44%), Postives = 497/507 (98.03%), Query Frame = 0
Query:    1 MPSNAKTQVHNGIDMATKLSHVQGMGPKSADMSEGGVAKXXXXXXXXXXXXXXQKIALVPFVADPVHQYDGDGNASCARERSVQDDFQLAVQQTLADHAKEVEDQGDSHGQPRDTGAGEGNDDLENGAKKEEATGSGGTHESASLAEHPLQSAVTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAAEGDCRKPPPASNGGVELKLERRSEVLMDDLEQHISRLQHSVFWEEVFETLKAEALVDGKDGWLVHQDARCGSDVVGPRTGTPEMAPEVVGRIESGAKRRLIGLSPRGMTTSTRNARARVAHVLDDEVMVEMDSHSLLGYRLVS 507
            MPSNAKTQV NGIDMATKLSHVQGMGPKSAD+SEGGVAKXXXXXXXXXXXXXXQKIALVPFVADPVHQYDGDGNASCARERSVQDDFQLAVQQTLADHAKEVEDQGDSHG PRDTGAGEGNDDLENGAKKEEA GSGGTHESASLAEHPLQSAVTSFD ALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPE LPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAA GDCRKPPPASNGG ELKLERRS+V MDDLEQHISRLQHSVFWEEVFETLKAEALVDGKDGWLVHQDARCGSDVVGPRTGTP MAPEVVGRIESGAKRRL+GLSPRGMTTST NARARVAHVLDDEVMVEMDSHSLLGYRLVS
Sbjct:    1 MPSNAKTQVQNGIDMATKLSHVQGMGPKSADVSEGGVAKXXXXXXXXXXXXXXQKIALVPFVADPVHQYDGDGNASCARERSVQDDFQLAVQQTLADHAKEVEDQGDSHGHPRDTGAGEGNDDLENGAKKEEAIGSGGTHESASLAEHPLQSAVTSFDMALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPEALPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAAAGDCRKPPPASNGGAELKLERRSDVRMDDLEQHISRLQHSVFWEEVFETLKAEALVDGKDGWLVHQDARCGSDVVGPRTGTPAMAPEVVGRIESGAKRRLVGLSPRGMTTSTLNARARVAHVLDDEVMVEMDSHSLLGYRLVS 507          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: D0MYT7_PHYIT (Mediator of RNA polymerase II transcription subunit 17 n=18 Tax=Phytophthora TaxID=4783 RepID=D0MYT7_PHYIT)

HSP 1 Score: 97.1 bits (240), Expect = 6.260e-17
Identity = 143/591 (24.20%), Postives = 243/591 (41.12%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAAEGDCRKPPPASNGGVELKLERRSEVLMDDLEQHISRL---QHSVFWEEVFETLKAEALVDGKDGWLVHQDARCGSDVVGPRTGTPEMAPEVVGRIESGAKRRLIGLSPRGMTTSTRNARARVAHVLDDEVMVEMDSHSLLGYRLVSGESPSSGWSGRPGSGSPAKGGTCPEDDRSKGPMMTRSASLCQLALLYCGSLIREQQRTQEVAGTVVSSKSPVSREVGAWISAESGGSTTGG----ASTGGRLSAASTWKSVGRVLLHHLFRSEVVQGLANVSR--SMQKI-----------GL--PL--AVRWTHLEETYRTSALTLTVGHCFHFRASLDDGCGIVVSALPGLQNHADQRSVELQSAQDLEHFLLREVCRQIVL 720
            V     A+ EL+QL++ +DL R  +F+          ++ R + + +A        E L  LV  K++Q+K +   L +  + L +T + + VF QG+  + + W+I AP HG +  P + GEPL+VDCS+GSAG   VP T +           +L+  E G +  +       +A +++L +  TG        +F   S        AE D              KLE   E L    E+++S L   Q SVF EE+F TL  EAL      W                        +    I   A ++       G   S+ +    V HVLDDE+ + ++    L  +LV  +S S      P   +     T  + D +    +T++   C+  LL     IR +   ++++  ++ + S +S   G  +++ + G+   G    + T    +   T  +V  VL H+L ++EV + L  VS   + QK+           GL  P+  +VR  ++   ++T A   T+   F      +    +++S    L         E+   + L  F+   VC Q+ L
Sbjct:  116 VAELQAAVAELHQLINSIDLIRRRDFL----------EEMRCIRENTAPKR-----EELEHLVEAKQAQVKESGAILLDGVEALAKTVEKESVFFQGITQMLRKWKICAPIHGNIPKPFRAGEPLAVDCSYGSAGSFFVPQTRSIADLA----YAELSRTEKGLVRVKTPEDFLARAIQIKLEAKDTGK-----EGAFTLPSPHLVPMTKAEMD--------------KLEDTPEDLKTLEERNVSILKAVQFSVFCEELFCTLMKEAL-QNTSKWT-----------------------DTAYNISKYAVKK------HGRDDSSTDTHISVLHVLDDEIQLRVNERYHLTIKLVDVKSLSKNKD--PRRAASISYSTPADSDEA---FLTQT---CRYTLLLLQQEIRTRHGRKDISRALLYTGSDISTTSGGGVNSSNSGAGAAGMGPASETDKHDNTPGTLATVLTVLAHNLLKNEVGRYLDEVSSVLAFQKLQSSASGRVLDDGLLQPICDSVRGVYVSPRWKTCAFDSTLS-AFDLNVGKNFSTEVLISGARILLQTGMASQREVSGVEGLREFVETTVCSQVAL 629          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: A0A0P1A5X6_PLAHL (Mediator of RNA polymerase II transcription subunit 17 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A5X6_PLAHL)

HSP 1 Score: 93.2 bits (230), Expect = 1.030e-15
Identity = 80/268 (29.85%), Postives = 131/268 (48.88%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTG-MCEHSLRASFPARSDRCRRTDAAEGDCRKPPPASNGGVELK-LERRSEVLMDDLEQHISRLQHSVFWEEVFETLKAEAL 419
            V     A+ EL+QL++ +DL R  EF+          ++ R + + +A     +  E L  +V  KR+Q+K +   L +  K + +T K + VF  G+ H+ + W+I APNHG +  P + GEPL+VDCS+GSAG   VP + +           +L+  E G +  +       +  ++ L + +TG + +++L   FP   +   RT+    D        N   +LK LE R+  ++         +Q SVF EE+F TL  EAL
Sbjct:  112 VIELQAAVAELHQLINSIDLIRRREFL----------EEMRCIRENTA-----LQKEELEHVVESKRAQVKESGTILLDGVKTIAKTVKKESVFFLGITHMLRKWKICAPNHGNIPKPFRAGEPLAVDCSYGSAGSSFVPQSQSIADMA----YAELSRTERGFVRVKTPENFLARTIQLTLKAKETGKLGKYTL--PFPTLIN-VTRTEMDASD--------NTPEDLKVLEERNLSIL-------KAVQFSVFCEELFYTLMKEAL 342          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: A0A484EDK9_BRELC (Mediator of RNA polymerase II transcription subunit 17 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDK9_BRELC)

HSP 1 Score: 84.7 bits (208), Expect = 4.470e-13
Identity = 79/274 (28.83%), Postives = 122/274 (44.53%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEA------QPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAAEGDCRKPPPASNGGVELKLERRSEVLMDDLEQHISRLQHSVFWEEVFETLKAEALVD 421
            V+    A  EL+QL++ +DL R  EF+          ++ R + + +A        E L  +V  KR+ +K +   L    + L +T + + +F QGV  + ++W+I AP HG +  P + GEPL+VDCS+GSAG   VP         +H  +  L   E  R E        P N    +  +++L++  TG         +   S         E D     PA     +LK      VL +  E  +  +Q S+F EE+F TL  EAL D
Sbjct:  114 VSELQAATAELHQLINSIDLIRRHEFL----------EEMRCIRENTAPKR-----EELEYVVEAKRAHVKESGSILLNGVQALAKTVEKESIFFQGVTEMLRNWKICAPIHGNIPKPFRAGEPLAVDCSYGSAGSLFVP---------QHRSIADLAYAELSRTEKGLILVKTPENFLA-RTIQLKLIAKDTGK-----EGKYTLPSPPLLHKTKTEMDKLDDKPA-----DLK------VLSNRNESILKAVQFSIFCEELFYTLMKEALHD 346          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: A0A3M6V7J4_9STRA (Mediator of RNA polymerase II transcription subunit 17 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V7J4_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 7.750e-13
Identity = 74/266 (27.82%), Postives = 117/266 (43.98%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAAEGDCRKPPPASNGGVELKLERRSEVLMDDLEQHISRLQHSVFWEEVFETLKAEAL 419
            V     A+ EL+QL++ +DL R  +F+          ++ R + + +A        E L  LV  K +Q+K +   L    + L +T + + VF QG++ + + W+I AP HG +  P + GEPL+VDCS+GSAG   VP   +         +  L   E  R E      +  + F  + + ++    +     S+   S        AE D     P     +++  ER   VL          +Q SVF EE+F TL  EAL
Sbjct:  119 VAELQAAVAELHQLINSIDLIRRRDFL----------EEMRCIRENTAPKR-----EELEHLVESKSAQVKESGTILLNGVEALAKTVEKESVFFQGIIQMLRKWKICAPIHGNIPKPFRAGEPLAVDCSYGSAGSSFVPQNRS---------IADLAYAELSRTEKGLVRAKTPEDFLTRTIQLKLEANDIGKEGSYTLPSPTLIHMTKAELDGLHDTPED---LKVLEERNMSVL--------KAVQFSVFCEELFYTLMKEAL 349          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: H3GXL2_PHYRM (Mediator of RNA polymerase II transcription subunit 17 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GXL2_PHYRM)

HSP 1 Score: 83.6 bits (205), Expect = 9.880e-13
Identity = 84/269 (31.23%), Postives = 119/269 (44.24%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAAEGDCRKPPPASNGGVELKLERRSEVLMDDLEQHISRL---QHSVFWEEVFETLKAEAL 419
            V     A+ EL+QL++ +DL R  +F+          ++ R + + +A        E L  LV  K  Q+K ++  L +  + L +T + + VF QG+ H+ + W+I AP HG +  P + GEPL+VDCS+GSAG    P T +         +  L   E  R E      +GL                  +RA  P   D   RT  AE D              KLE   E L    E++IS L   Q SVF EE+F TL  EAL
Sbjct:  117 VAELQAAVAELHQLINSIDLIRRRDFL----------EEMRCIRENTAPKR-----EELEHLVESKSEQVKESSTILLDGVEALAKTVEKESVFFQGITHMLRKWKICAPIHGNIPKPFRAGEPLAVDCSYGSAGSFFAPQTRS---------IADLAYAELSRTE------KGL------------------VRAKTP--EDFLARTIQAEMD--------------KLEDTPEDLKILEERNISVLKAVQFSVFCEELFYTLMKEAL 321          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: A0A3F2S100_9STRA (Mediator of RNA polymerase II transcription subunit 17 n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S100_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.020e-12
Identity = 74/266 (27.82%), Postives = 116/266 (43.61%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAAEGDCRKPPPASNGGVELKLERRSEVLMDDLEQHISRLQHSVFWEEVFETLKAEAL 419
            V     A+ EL+QL++ +DL R  +F+          ++ R + + +A        E L  LV  K +Q+K     L +  + L +T + + VF QG+  + + W+I AP HG +  P + GEPL+VDCS+GSAG    P T +         + +L   E  R E      +  + F  + + ++          ++   S        AE D  +  P     +E   ER   VL          +Q SVF EE+F TL  EAL
Sbjct:  121 VAELQAAVAELHQLINSIDLIRRRDFL----------EEMRCIRENTAPKR-----EELEQLVEAKSAQVKECGTILMDGVEELAKTVEKESVFFQGITQMLRKWKICAPIHGNIPKPFRAGEPLAVDCSYGSAGSIFAPQTRS---------IAELAFAELNRTEKGLVRVKTPEDFLTRTIQLKLEATGSGTEGNYTLPSPTVITMTKAEMDKLENTPEDQKILE---ERNVSVL--------KAVQFSVFCEELFYTLMKEAL 351          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: A0A6A3Z337_9STRA (Mediator of RNA polymerase II transcription subunit 17 n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Z337_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 1.340e-12
Identity = 72/266 (27.07%), Postives = 117/266 (43.98%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGTRHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRASFPARSDRCRRTDAAEGDCRKPPPASNGGVELKLERRSEVLMDDLEQHISRLQHSVFWEEVFETLKAEAL 419
            V     A+ EL+QL++ +DL R  +F+          ++ R + + +A        E L  LV  K +Q+K +   L +  + L +T + + VF QG+  + + W+I AP HG +  P + GEPL+VDCS+GSAG    P T +         +  L   E  R E      +  + F  + + ++    +     ++            A+ D  +  P     V++  ER   VL          +Q SVF EE+F TL  EAL
Sbjct:  118 VAELQAAVAELHQLINSIDLIRRRDFL----------EEMRCIRENTAPKR-----EELEHLVEAKSAQVKESGTILLDGVEALAKTVEKESVFFQGITQMLRKWKICAPIHGNIPKPFRAGEPLAVDCSYGSAGSIFAPQTRS---------IADLAYAELSRTEKGLVRVKTPEDFLTRTIQLRLEATDTGKEGNYTLPPPHLIHMTKADMDALEDTPED---VKILEERNVSVLR--------AVQFSVFCEELFYTLMKEAL 348          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: A0A2P4Y3J1_9STRA (Mediator of RNA polymerase II transcription subunit 17 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3J1_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.160e-11
Identity = 47/142 (33.10%), Postives = 75/142 (52.82%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFT 295
            V     A+ EL+QL++ +DL R  +F+          ++ R + + +A        E L  LV  K +Q+K +   L +  + L +T + + VF  G+  + + W+I AP HG +  P + GEPL+VDCS+GSAG   VP T
Sbjct:  116 VAELQAAVAELHQLINSIDLIRRRDFL----------EEMRCIRENTAPKR-----EELEQLVEAKSAQVKESGTILLDGVEALAKTVETESVFFHGITQMLRKWKICAPIHGNIPKPFRAGEPLAVDCSYGSAGSTFVPQT 242          
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Match: A0A2P4Y4F6_9STRA (Mediator of RNA polymerase II transcription subunit 17 (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4F6_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 7.130e-11
Identity = 47/142 (33.10%), Postives = 75/142 (52.82%), Query Frame = 0
Query:  154 VTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQSARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQGVVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFT 295
            V     A+ EL+QL++ +DL R  +F+          ++ R + + +A        E L  LV  K +Q+K +   L +  + L +T + + VF  G+  + + W+I AP HG +  P + GEPL+VDCS+GSAG   VP T
Sbjct:  116 VAELQAAVAELHQLINSIDLIRRRDFL----------EEMRCIRENTAPKR-----EELEQLVEAKSAQVKESGTILLDGVEALAKTVETESVFFHGITQMLRKWKICAPIHGNIPKPFRAGEPLAVDCSYGSAGSTFVPQT 242          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig92.17245.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
D7FYM3_ECTSI0.000e+097.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D0MYT7_PHYIT6.260e-1724.20Mediator of RNA polymerase II transcription subuni... [more]
A0A0P1A5X6_PLAHL1.030e-1529.85Mediator of RNA polymerase II transcription subuni... [more]
A0A484EDK9_BRELC4.470e-1328.83Mediator of RNA polymerase II transcription subuni... [more]
A0A3M6V7J4_9STRA7.750e-1327.82Mediator of RNA polymerase II transcription subuni... [more]
H3GXL2_PHYRM9.880e-1331.23Mediator of RNA polymerase II transcription subuni... [more]
A0A3F2S100_9STRA1.020e-1227.82Mediator of RNA polymerase II transcription subuni... [more]
A0A6A3Z337_9STRA1.340e-1227.07Mediator of RNA polymerase II transcription subuni... [more]
A0A2P4Y3J1_9STRA3.160e-1133.10Mediator of RNA polymerase II transcription subuni... [more]
A0A2P4Y4F6_9STRA7.130e-1133.10Mediator of RNA polymerase II transcription subuni... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 220..240
IPR019313Mediator complex, subunit Med17PANTHERPTHR13114TRANSCRIPTIONAL CO-ACTIVATOR CRSP77-RELATEDcoord: 55..420

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig92contigE-siliculosus-1a_M_contig92:16257..20868 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig92.17245.1mRNA_E-siliculosus-1a_M_contig92.17245.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig92 16098..21605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig92.17245.1 ID=prot_E-siliculosus-1a_M_contig92.17245.1|Name=mRNA_E-siliculosus-1a_M_contig92.17245.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=859bp
MPSNAKTQVHNGIDMATKLSHVQGMGPKSADMSEGGVAKPKSAEKDENGV
ESPQKIALVPFVADPVHQYDGDGNASCARERSVQDDFQLAVQQTLADHAK
EVEDQGDSHGQPRDTGAGEGNDDLENGAKKEEATGSGGTHESASLAEHPL
QSAVTSFDKALGELNQLVHLVDLARAGEFMALERVTPSDEDQARAMSDQS
ARPGDGVPPETLPSLVTMKRSQLKGAAEQLRERAKRLRETTKVQLVFQQG
VVHLRKSWRIVAPNHGKVNVPLQVGEPLSVDCSFGSAGGKSVPFTAAAGT
RHRHPWLFQLTCGEGGRLEAQPSNTQGLKAFEVQLVSVQTGMCEHSLRAS
FPARSDRCRRTDAAEGDCRKPPPASNGGVELKLERRSEVLMDDLEQHISR
LQHSVFWEEVFETLKAEALVDGKDGWLVHQDARCGSDVVGPRTGTPEMAP
EVVGRIESGAKRRLIGLSPRGMTTSTRNARARVAHVLDDEVMVEMDSHSL
LGYRLVSGESPSSGWSGRPGSGSPAKGGTCPEDDRSKGPMMTRSASLCQL
ALLYCGSLIREQQRTQEVAGTVVSSKSPVSREVGAWISAESGGSTTGGAS
TGGRLSAASTWKSVGRVLLHHLFRSEVVQGLANVSRSMQKIGLPLAVRWT
HLEETYRTSALTLTVGHCFHFRASLDDGCGIVVSALPGLQNHADQRSVEL
QSAQDLEHFLLREVCRQIVLTFGDITASWTSGVMSEGAACFRVELEPAAI
YLFPGPKTEESGPKSTEEPRGSNCEVRVYVQGAGVQIACSSWSTSGCNGQ
GPRNEGKAGFLTDTPARPSDTSSTTAATLEVNVAEWDKLDGRDLFQKFSS
LLGILYPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019313Mediator_Med17