prot_E-siliculosus-1a_F_contig105.353.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig105.353.1
Unique Name	prot_E-siliculosus-1a_F_contig105.353.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	489

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A6H5KSI2_9PHAE (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI2_9PHAE)

HSP 1 Score: 933 bits (2411), Expect = 0.000e+0
Identity = 484/578 (83.74%), Postives = 486/578 (84.08%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT                              IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEF+QFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER                                                       ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKD DGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPK+QTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVV DFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY
Sbjct:   73 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFATDLLMTPDGECVGVIAVCMEDGSIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFIQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRSMTIEIKEGRGVGPNADHIHLHLDHLPAELLAERLPGISETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDGDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKAQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVKDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 650

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BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: D8LSF2_ECTSI (SDH1, succinate dehydrogenase subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF2_ECTSI)

HSP 1 Score: 900 bits (2326), Expect = 0.000e+0
Identity = 445/448 (99.33%), Postives = 447/448 (99.78%), Query Frame = 0

Query:   41 MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKD DGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVV+DF+DVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY
Sbjct:   93 MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDGDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVNDFSDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 540

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BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A7S3ZYC3_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=3 Tax=cellular organisms TaxID=131567 RepID=A0A7S3ZYC3_9STRA)

HSP 1 Score: 785 bits (2028), Expect = 3.320e-281
Identity = 406/578 (70.24%), Postives = 437/578 (75.61%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTE+GKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT                              IHR +AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNS+GERFMER                                                       ETA IF+GVDVT++PIPVLPTVHYNMGGIPTNHLGEVI  KKD+ GNV DHDA+VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGD V   P+   +K+L  LD  R + G TP A++R  +QK MQDHAAVYRTQESLAEGVT++D VV  F DV V+DRSLIWNTDL+E +EL NLL NAA TMHAAEARKESRGAHARED PDRLDD WMKH+MTY+D  T KT V YRP+H  TLDE+E  +VPP  RVY
Sbjct:   76 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEDGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTTYFLEFFALDLIMDDEGKCVGVVCLEMENGTIHRINAKNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSDGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKEKDHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTREPIPVLPTVHYNMGGIPTNHLGEVIHQKKDASGNVVDHDAVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDAVPPLPRDAGQKTLQDLDDVRHSSGPTPTAEIRRDMQKTMQDHAAVYRTQESLAEGVTKIDKVVDSFQDVGVSDRSLIWNTDLVETLELRNLLPNAAATMHAAEARKESRGAHAREDCPDRLDDDWMKHTMTYYDEATRKTSVTYRPIHYETLDEDECAVVPPVARVY 653

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BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A835YUP3_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUP3_9STRA)

HSP 1 Score: 779 bits (2011), Expect = 3.490e-279
Identity = 404/578 (69.90%), Postives = 445/578 (76.99%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MG AEAG KTACITKLFPTRSHTVAAQGGINAALGNMT D     MYDTVKGSDWLGDQDAIHYMC+EAPRAVLELE YGLPFSRTE+GKIYQRAFGGQSL++GKGGQAYRCA AADRTGHAMLHTLYGRSLAF+T+                              IHRF AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+PL+DPEFVQFHPTGIYGAGCLITEG RGEGG+LRNSEGERFMER                                                       E A IFSGVDVTK+PIPVLPTVHYNMGGIPTNH GEV++P+K+++G++ D DAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGDKV +APK++T+++L ALD  R+A G T  A+LRLKLQ+ MQD+AAVYRTQE+LA GV  VD VV +F DV VTDRSLIWNTDLIE MEL NLL NAACTMHAAEARKESRGAHAREDF DR D  WMKH++  FD   GKT ++YRPVH+FTLDE+E K+VPPFKRVY
Sbjct:   41 MGLAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTPDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPRAVLELEQYGLPFSRTEDGKIYQRAFGGQSLEFGKGGQAYRCAAAADRTGHAMLHTLYGRSLAFNTSYFIEYFAMDLLMADDGSCVGVTAMCMEDGSIHRFKAKNTVLATGGYGRAYFSCTSAHTCTGDGSAMALRAGLPLQDPEFVQFHPTGIYGAGCLITEGSRGEGGMLRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGPNKDHIHLHLDHLPAELLAERLPGISELAAIFSGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVVKPRKNANGDI-DQDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDKVQDAPKAETDRALGALDDMRYARGQTSTAELRLKLQRVMQDNAAVYRTQETLAHGVVSVDAVVKEFGDVGVTDRSLIWNTDLIETMELRNLLGNAACTMHAAEARKESRGAHAREDFKDRDDVNWMKHTLATFDESKGKTHLDYRPVHAFTLDEKECKVVPPFKRVY 617

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BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: W7TSA7_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=4 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSA7_9STRA)

HSP 1 Score: 759 bits (1959), Expect = 8.250e-271
Identity = 395/578 (68.34%), Postives = 434/578 (75.09%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAPRAV ELESYGLPFSRTE+GKIYQRAFGGQSL YGKGGQAYRCACAADRTGHAMLHTLYGRSLAF+TT                              +HR  A NTVLATGGYGRA+FSCTSAHTCTGDG AM +RAG+P+EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRN+EGERFMER                                                       ETA IF+GVDVTK+PIPVLPTVHYNMGGIPTNH GEVI PKK +DG++ D D ++PGLFAAGEAACASVHGANRLGANSLLDIVVFGRA ALRIA+I+KPGDKV   P    ++S+  LDK RFA G+T  A +R K+QK MQ+HAAVYRTQ+SLAEG  ++D V+S + D+KVTDRSL+WNTDLIE++EL NLLSNAA TM+AAEARKESRGAHAREDF +R D  WM H++  FDYDT KT + YRPVH  TLDE EVK VPPFKRVY
Sbjct:   71 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVYELESYGLPFSRTEDGKIYQRAFGGQSLKYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFNTTYFIEYFALDLIMDGDGRCVGITALNMEDGTLHRIHANNTVLATGGYGRAYFSCTSAHTCTGDGNAMVLRAGLPVEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAEGERFMERYAPTAKDLASRDVVSRAMTMEIREGRGVGKEKDHLFLHLDHLPPDLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHFGEVIAPKKKADGSL-DPDHVIPGLFAAGEAACASVHGANRLGANSLLDIVVFGRATALRIADIAKPGDKVPPMPADAGQRSVEDLDKVRFASGSTNTATIRKKMQKTMQEHAAVYRTQDSLAEGKVKIDEVLSTWQDLKVTDRSLMWNTDLIESLELRNLLSNAATTMYAAEARKESRGAHAREDFSERDDANWMMHTIADFDYDTHKTTISYRPVHKHTLDENEVKPVPPFKRVY 647

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BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A6U4KQK6_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KQK6_9STRA)

HSP 1 Score: 748 bits (1932), Expect = 7.330e-267
Identity = 389/578 (67.30%), Postives = 428/578 (74.05%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDT------------------------------TIHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MG +E G KTAC+TKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSL++GKGGQAYRCACAADRTGHAMLHTLYGRSLAFDT                              T+HRF+AKNTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAGIP +DPEFVQFHPTGIYGAGCL+TEGCRGEGGILRNSEGERFMER                                                       ETA IF+GVDVTK+PIPVLPTVHYNMGG+PTNH GEV++P KD      + DA+VPGLFAAGE A ASVHGANRLGANSLLDIVVFGRACA RIA+I+KPG+ V   P    EK++  LDK RFADGA P AD+RL +Q  MQ+HAAVYRT + L EGV ++D VV  F DVKV+D SL+WNTDLIE  EL NLL NAA T+H+AEARKESRGAHA E+FPDR D+ WMKH+++Y D D+GKT V+YRPVH FTLDE E K VPP  RVY
Sbjct:   66 MGLSEHGFKTACVTKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLEFGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTAYFIEYFALDLIMDGDGKCVGIMAINMEDGTLHRFNAKNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGIPNQDPEFVQFHPTGIYGAGCLMTEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGPKSDHIYLHLDHLPADLLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGVPTNHFGEVLKPTKD------EPDAVVPGLFAAGEVASASVHGANRLGANSLLDIVVFGRACANRIADIAKPGEAVPPLPTKAGEKTIDDLDKVRFADGAIPTADIRLDMQMTMQEHAAVYRTADVLKEGVVKMDEVVKKFKDVKVSDHSLVWNTDLIETWELRNLLPNAATTVHSAEARKESRGAHAHENFPDRDDENWMKHTLSYHDEDSGKTTVDYRPVHYFTLDEAECKTVPPVARVY 637

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BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A7S2Y3D2_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3D2_9STRA)

HSP 1 Score: 746 bits (1926), Expect = 7.680e-266
Identity = 389/578 (67.30%), Postives = 431/578 (74.57%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT-----------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVS-DFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MG AEAG  TAC+TKLFPTRSHTVAAQGGINAALGNMT+D     MYDTVKGSDWLGDQDAIHYMC+EAP AVLELESYGLPFSRTEEGKIYQRAFGGQSL+YGKGGQA+RCACAADRTGHAMLHTLYGRSLAFDTT                             IHRF   NTVLATGG GRA+FSCTSAHTCTGDGGAMA RAG+PLED EFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER                                                       ETA IF+GVDVTKDPIPVLPTVHYNMGGIPTNHLGEVI PKK ++G V D DAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I+KPGDK    P    ++S+A +DK R+A+G+T  ADLRL+LQK MQ HAAVYRT + L +G+  VD +     +DV+  D+ L+WNT+LIE +EL NL++NA+  + +AE RKESRGAHAREDFPDR D+ WMKH++ YFD  TGK+K+EYRPVHSFTLDE+E K VPP +RVY
Sbjct:   67 MGLAEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMTKDDWRWHMYDTVKGSDWLGDQDAIHYMCKEAPHAVLELESYGLPFSRTEEGKIYQRAFGGQSLEYGKGGQAFRCACAADRTGHAMLHTLYGRSLAFDTTYFIEYFALDLMMSEGQCVGITAMCMEDGSIHRFHTNNTVLATGGAGRAYFSCTSAHTCTGDGGAMATRAGLPLEDQEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTVEIQEGRGVGKNKDHIFLHLDHLPPDLLAERLPGISETASIFAGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVINPKKAANGEVEDWDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAKPGDKKPPLPGDAGDQSIADVDKFRYANGSTSTADLRLELQKSMQTHAAVYRTPDLLKKGLDEVDAIAKRSVDDVRNDDKGLVWNTNLIETLELRNLVANASTVITSAENRKESRGAHAREDFPDRDDEHWMKHTLAYFDEATGKSKLEYRPVHSFTLDEDECKTVPPVQRVY 644

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BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: F0YDU4_AURAN (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDU4_AURAN)

HSP 1 Score: 744 bits (1921), Expect = 2.590e-265
Identity = 390/578 (67.47%), Postives = 422/578 (73.01%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MG AEAG KTAC+TKLFPTRSHTVAAQGGINAALGNM+ED     MYDTVKGSDWLGDQDAIHYMCREAP+AVLELES+GLPFSRT++GKIYQRAFGGQSLDYGKGGQAYRC  AADRTGHAMLHTLYGRSLAFDTT                              +HR +A NTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER                                                       ETA IF+GVDVTK+PIPVLPTVHYNMGGIPTNHLGEVIR     DG+V DHD +VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I++PG  V   P    EK++A +D  RF+ G  P AD+R  +QK MQDHAAVYRT ESLAEG  ++   V  F D+ VTDRSLIWNTDLIE +EL NLL NAA TM AAEARKESRGAHARED PDRLDD WMKH+M YFD  T KT V YRP+H  TLD +E  +VPP  RVY
Sbjct:   52 MGAAEAGFKTACVTKLFPTRSHTVAAQGGINAALGNMSEDDWKWHMYDTVKGSDWLGDQDAIHYMCREAPQAVLELESFGLPFSRTDDGKIYQRAFGGQSLDYGKGGQAYRCCAAADRTGHAMLHTLYGRSLAFDTTYFLEYFALDLIMDDEGSCVGIVAINMEDGTLHRINASNTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKDADHCYLHLDHLPAELLAERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHLGEVIRQVTGPDGSVIDHDEVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIADIAEPGAPVPPLPADAAEKTIADVDAIRFSSGPRPTADVRKDMQKTMQDHAAVYRTAESLAEGCEKIQKNVEAFADIGVTDRSLIWNTDLIETIELRNLLPNAATTMFAAEARKESRGAHAREDTPDRLDDEWMKHTMCYFDEATNKTTVTYRPIHYETLDADECPVVPPVARVY 629

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A7S2RM10_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RM10_9STRA)

HSP 1 Score: 737 bits (1903), Expect = 2.080e-262
Identity = 387/578 (66.96%), Postives = 422/578 (73.01%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MG AEAG KTACITKLFPTRSHTVAAQGGINAALGNMTED     MYDTVKGSDWLGDQDAIHYMCREAP+AVLELES+G+PFSRTEEGKIYQRAFGGQSLD+GKGGQAYRCA AADRTGHAMLHTLYGRSLAFDTT                              +HR +A NT+LATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  EDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER                                                       ETA IF+ VDVTK+PIPVLPTVHYNMGG+PTNH GEVIR KK++DG   DHD+IVPGLFAAGE ACASVHGANRLGANSLLDIVVFGRACA RIAEI+KPG  V   PK   + S+A LDK R+A G  P A LRL++Q+ MQ++AAVYRT E L+EG  ++D VV  F  V  +DRSLIWNTDLIE +EL NLL NA+ TMHAA  R ESRGAHARED PDR D+ WMKH+M YFD  TG++ VEYRPVH  TLDE E K VPP  RVY
Sbjct:   64 MGAAEAGFKTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIHYMCREAPKAVLELESFGMPFSRTEEGKIYQRAFGGQSLDFGKGGQAYRCAAAADRTGHAMLHTLYGRSLAFDTTYLIEYFALDLIMDDEGRCVGVLAMCMEDGSLHRINASNTILATGGYGRAYFSCTSAHTCTGDGNAMAMRAGLANEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPSAKDLASRDVVSRAMTMEIREGRGVGKNNDHIFLHLDHLPADLLAERLPGISETANIFAAVDVTKEPIPVLPTVHYNMGGVPTNHFGEVIRVKKNADGT-EDHDSIVPGLFAAGEVACASVHGANRLGANSLLDIVVFGRACANRIAEIAKPGAPVPPLPKDAGDASIADLDKLRYAKGDVPTASLRLEMQQVMQENAAVYRTAEVLSEGCEKIDAVVDKFQHVGTSDRSLIWNTDLIETLELRNLLGNASTTMHAASQRTESRGAHAREDTPDRDDENWMKHTMAYFDESTGRSTVEYRPVHYHTLDEGECKTVPPVARVY 640

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Match: A0A7S3JSD7_9STRA (Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSD7_9STRA)

HSP 1 Score: 734 bits (1895), Expect = 2.670e-261
Identity = 383/579 (66.15%), Postives = 426/579 (73.58%), Query Frame = 0

Query:    1 MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTED-----MYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAYRCACAADRTGHAMLHTLYGRSLAFDTT------------------------------IHRFSAKNTVLATGGYGRAFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNSEGERFMER-------------------------------------------------------ETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTNHLGEVIRPKKD-SDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVADLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWNTDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHSMTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY 488
            MG AEAG KT C+TKLFPTRSHTVAAQGGINAALGNMT+D      YDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQA+RCACAADRTGHAMLHTLYGRSLAFDTT                              +HR  A NTVLATGGYGRA+FSCTSAHTCTGDG AMA+RAG+  +DPEFVQFHPTGIYGAGCLITEGCRGEGGILRN++GERFMER                                                       ETAQIF+GVDVTK+PIPVLPTVHYNMGGIPTN+ GEVIR  KD + G + DHDA+VPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIA+I++PG +    PK+  EKS+A L++ RFA G TP A +R  +QK MQDHAAVYRTQESLA+G  ++D V + F DV + DRSLIWNTDL+E +EL NLL NAA T+HAAE RKESRGAHAREDF  R D  WMKH++ Y D ++ + +V+YRP+H +TLDE E   VPP  RVY
Sbjct:   55 MGSAEAGFKTVCVTKLFPTRSHTVAAQGGINAALGNMTKDDWRWHSYDTVKGSDWLGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGKGGQAFRCACAADRTGHAMLHTLYGRSLAFDTTYLIEYFALDLIMDDDGACVGVLALCMEDGSLHRIHAANTVLATGGYGRAYFSCTSAHTCTGDGNAMALRAGLAAQDPEFVQFHPTGIYGAGCLITEGCRGEGGILRNAQGERFMERYAPSAKDLASRDVVSRAMTLEIQQGRGVGKDKDHIFLHLDHLPPELLAERLPGISETAQIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVIRQIKDEATGEIIDHDAVVPGLFAAGEAACASVHGANRLGANSLLDIVVFGRACALRIAQIAQPGGQKKPLPKNAGEKSIADLNQIRFAQGPTPTAHIRHSMQKVMQDHAAVYRTQESLAQGAQKIDQVCAAFADVGIKDRSLIWNTDLVETLELRNLLPNAATTVHAAEKRKESRGAHAREDFTTRDDQNWMKHTVCYVDPESFQVQVDYRPIHYYTLDENEFATVPPVARVY 633

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig105.353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KSI2_9PHAE	0.000e+0	83.74	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
D8LSF2_ECTSI	0.000e+0	99.33	SDH1, succinate dehydrogenase subunit 1 n=1 Tax=Ec...	[more]
A0A7S3ZYC3_9STRA	3.320e-281	70.24	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A835YUP3_9STRA	3.490e-279	69.90	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
W7TSA7_9STRA	8.250e-271	68.34	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A6U4KQK6_9STRA	7.330e-267	67.30	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A7S2Y3D2_9STRA	7.680e-266	67.30	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
F0YDU4_AURAN	2.590e-265	67.47	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A7S2RM10_9STRA	2.080e-262	66.96	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]
A0A7S3JSD7_9STRA	2.670e-261	66.15	Succinate dehydrogenase [ubiquinone] flavoprotein ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 406..426
None	No IPR available	GENE3D	1.20.58.100		coord: 324..438 e-value: 2.9E-38 score: 132.7
None	No IPR available	GENE3D	4.10.80.40		coord: 439..488 e-value: 2.6E-17 score: 64.2
None	No IPR available	PANTHER	PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	coord: 1..132
None	No IPR available	PANTHER	PTHR11632:SF51	SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL	coord: 1..132 coord: 130..218
None	No IPR available	PANTHER	PTHR11632	SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT	coord: 219..488 coord: 130..218
None	No IPR available	PANTHER	PTHR11632:SF51	SUCCINATE DEHYDROGENASE [UBIQUINONE] FLAVOPROTEIN SUBUNIT, MITOCHONDRIAL	coord: 219..488
IPR003953	FAD-dependent oxidoreductase 2, FAD binding domain	PFAM	PF00890	FAD_binding_2	coord: 220..298 e-value: 3.9E-17 score: 62.4 coord: 3..131 e-value: 1.8E-28 score: 99.8
IPR015939	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal	PFAM	PF02910	Succ_DH_flav_C	coord: 353..488 e-value: 1.2E-41 score: 141.7
IPR036188	FAD/NAD(P)-binding domain superfamily	GENE3D	3.50.50.60		coord: 231..323 e-value: 3.6E-32 score: 113.4 coord: 131..227 e-value: 9.4E-25 score: 89.1 coord: 1..130 e-value: 4.6E-46 score: 159.1
IPR036188	FAD/NAD(P)-binding domain superfamily	SUPERFAMILY	51905	FAD/NAD(P)-binding domain	coord: 3..329
IPR003952	Fumarate reductase/succinate dehydrogenase, FAD-binding site	PROSITE	PS00504	FRD_SDH_FAD_BINDING	coord: 20..29
IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily	SUPERFAMILY	56425	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain	coord: 179..242
IPR037099	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily	SUPERFAMILY	46977	Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain	coord: 344..488

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig105	contig	E-siliculosus-1a_F_contig105:170..10698 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig105.353.1	mRNA_E-siliculosus-1a_F_contig105.353.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig105 105..11810 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig105.353.1 ID=prot_E-siliculosus-1a_F_contig105.353.1|Name=mRNA_E-siliculosus-1a_F_contig105.353.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=489bp
MGCAEAGLKTACITKLFPTRSHTVAAQGGINAALGNMTEDMYDTVKGSDW
LGDQDAIHYMCREAPRAVLELESYGLPFSRTEEGKIYQRAFGGQSLDYGK
GGQAYRCACAADRTGHAMLHTLYGRSLAFDTTIHRFSAKNTVLATGGYGR
AFFSCTSAHTCTGDGGAMAIRAGIPLEDPEFVQFHPTGIYGAGCLITEGC
RGEGGILRNSEGERFMERETAQIFSGVDVTKDPIPVLPTVHYNMGGIPTN
HLGEVIRPKKDSDGNVTDHDAIVPGLFAAGEAACASVHGANRLGANSLLD
IVVFGRACALRIAEISKPGDKVAEAPKSQTEKSLAALDKTRFADGATPVA
DLRLKLQKEMQDHAAVYRTQESLAEGVTRVDGVVSDFNDVKVTDRSLIWN
TDLIEAMELENLLSNAACTMHAAEARKESRGAHAREDFPDRLDDTWMKHS
MTYFDYDTGKTKVEYRPVHSFTLDEEEVKMVPPFKRVY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037099	Fum_R/Succ_DH_flav-like_C_sf
IPR027477	Succ_DH/fumarate_Rdtase_cat_sf
IPR003952	FRD_SDH_FAD_BS
IPR036188	FAD/NAD-bd_sf
IPR015939	Fum_Rdtase/Succ_DH_flav-like_C
IPR003953	FAD-binding_2