prot_E-siliculosus-1a_M_contig9.17097.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17097.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17097.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length164
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: D7G4M2_ECTSI (Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4M2_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 1.660e-56
Identity = 100/133 (75.19%), Postives = 113/133 (84.96%), Query Frame = 0
Query:   33 VKFKDE--ELTLTYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLEEAFSAGAS 163
            V+F +E   L LTYQKD  D++SQC  V+ LSGGERSFATLALLLAL   H+CPFRVMDEFDVF+DA+SR++AIKQV+EFA RDS+RQFILITPQDLSSVTASD CKIIKMQPPRKGDHNQTTLEE    G +
Sbjct: 1134 VRFDNECQTLGLTYQKDSSDNASQCSDVKLLSGGERSFATLALLLALGQSHECPFRVMDEFDVFMDAMSRNIAIKQVIEFAKRDSSRQFILITPQDLSSVTASDACKIIKMQPPRKGDHNQTTLEETLGGGGA 1266          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: D7G4M1_ECTSI (Smc-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M1_ECTSI)

HSP 1 Score: 186 bits (471), Expect = 2.130e-51
Identity = 93/133 (69.92%), Postives = 112/133 (84.21%), Query Frame = 0
Query:   33 VKF--KDEELTLTYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLEEAFSAGAS 163
            VKF  K + L L+YQ    +D+S+C+ VRQLSGGE+S+ATLALLL+L + HDCPFRVMDEFDVF+DAVSRD AI +VL+FA R+  +QFI ITPQDLSSVT+SDTCKIIKMQPPRKGDHNQTTL E+F + +S
Sbjct: 1035 VKFNHKKKTLGLSYQSQAHNDTSKCRDVRQLSGGEKSYATLALLLSLGAHHDCPFRVMDEFDVFMDAVSRDHAILEVLKFAKRNKDKQFIFITPQDLSSVTSSDTCKIIKMQPPRKGDHNQTTLTESFGSSSS 1167          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: F0YEV6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEV6_AURAN)

HSP 1 Score: 139 bits (351), Expect = 7.530e-39
Identity = 71/126 (56.35%), Postives = 93/126 (73.81%), Query Frame = 0
Query:   34 KFKDEELTLTYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLEEAFS 159
            + K++ L LTYQKD  DD++    +  LSGGERSF+TLA+L++L +  +CPFRVMDEFDVF+D VSR VA+K++++ A +   RQFI ITPQDLSS+  SD  KI KM PP +G   Q TLEEAF+
Sbjct:   67 EHKEKTLGLTYQKDNADDANIINNITSLSGGERSFSTLAMLISLGATIECPFRVMDEFDVFMDQVSRKVAMKELVDMAKKMENRQFIFITPQDLSSLPQSDILKIFKMNPPIRG---QRTLEEAFA 189          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: A0A7S2C434_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C434_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.550e-32
Identity = 71/157 (45.22%), Postives = 96/157 (61.15%), Query Frame = 0
Query:    3 RDLQGKLSPNHFGTTAVTNGRNTAAAVDRNVKFKDEELTLTYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLEEAFS 159
            R     L+ + F  T    G +     D + K     L++  QKD  D  SQ    + LSGGERS+ TL+LL++L  C +CPFRVMDEFDVF+DAVSR  A++ ++E   + + RQFI ITPQD+SSVT S   KI +M+PP + +  Q TLEEA +
Sbjct:   27 RKTVANLTNSKFDQTLNAKGHSGQVVFDYDKKT----LSVVVQKDNRDSQSQITDPKLLSGGERSYVTLSLLISLGECIECPFRVMDEFDVFMDAVSRKKALETLIETGKKYAHRQFIFITPQDISSVTPSPMVKIHRMRPPGRLN-GQQTLEEAMA 178          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: A0A7R9VE37_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VE37_9STRA)

HSP 1 Score: 116 bits (291), Expect = 5.200e-30
Identity = 68/157 (43.31%), Postives = 94/157 (59.87%), Query Frame = 0
Query:    3 RDLQGKL-SPNHFGTTAVTNGRNTAAAVDRNVKFKDEELTLTYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLEEAF 158
            R+ +G L    +     + N + +A  +D     +++ L L  QKD  ++ SQ K V+ LSGGERSF TLALLLAL    + PFRVMDEFDVFLD V+R +A+  ++  A     RQFI ITPQDLS++T     KII+M+PP +   N T  ++  
Sbjct:   19 REFRGYLVETTNISFDQMLNKKGSAGQLD--FDHENQTLNLIVQKDNSNEMSQTKDVKALSGGERSFTTLALLLALGESLETPFRVMDEFDVFLDPVARKIALDNMVSAAKSLEHRQFIFITPQDLSNLTTDPMLKIIRMKPPAR---NSTAAQQTL 170          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: A0A7S2WV71_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV71_9STRA)

HSP 1 Score: 120 bits (301), Expect = 9.520e-30
Identity = 71/150 (47.33%), Postives = 90/150 (60.00%), Query Frame = 0
Query:    8 KLSPNHFGTTAVTNGRNTAAAVDRNVKFKDEELTLTYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLEEA 157
            +L+   F  T    G+     +D     KD  L  + QKD  D  SQ + V+ LSGGERS+ATL+ L+AL    +CPFRVMDEFDVF+D VSR VA+  ++E       RQFILITPQDLSSVT +   KI K+  P++    Q TLE A
Sbjct:  207 ELTNTRFEQTLQRKGQTGRVQMDH----KDRTLEFSVQKDNRDSMSQIESVKLLSGGERSYATLSFLIALGDALECPFRVMDEFDVFMDQVSRRVALDLLIEQGRICRNRQFILITPQDLSSVTPAVDVKIFKLPDPKRTLAGQQTLEFA 352          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: A0A8J2X4G0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4G0_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.250e-29
Identity = 62/125 (49.60%), Postives = 90/125 (72.00%), Query Frame = 0
Query:   33 VKFKDEELTL--TYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLE 155
            ++F  E+ TL  TYQKD  D+++Q   ++ LSGGERSF+TLA+L++L +  +CPFRVMDEFDVF+D VSR VA++++++ A     RQF+ ITPQDLSS+  S+  K+ K+  P +G   Q TL+
Sbjct: 1049 LRFDHEDATLKMTYQKDNQDETTQIDNIQSLSGGERSFSTLAMLVSLGATIECPFRVMDEFDVFMDQVSRKVAMQELVDMAREMPNRQFVFITPQDLSSLPQSNHLKVFKLNAPIRG---QQTLD 1170          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: A0A836CML4_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CML4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.280e-29
Identity = 68/138 (49.28%), Postives = 89/138 (64.49%), Query Frame = 0
Query:   36 KDEELTLTYQKDGGDDSSQCKG------------VRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLEEAFSAG 161
            K++ L+L  Q+   D+ SQ               +  +SGGERS+ATLALLLAL   H+ PFRVMDEFDVF+DA SR  A++Q+++ A  +  RQFI ITPQDL  + A D  +I KMQ PR+G   Q TL+EAF+AG
Sbjct: 1105 KNKTLSLEIQQSNLDEMSQSSNRPTAQAGSSATLLENMSGGERSYATLALLLALGKSHESPFRVMDEFDVFMDAQSRQAAMRQLVKHARENPGRQFIFITPQDLRGLEAGDDLRIFKMQSPREG---QVTLDEAFAAG 1239          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: A0A7S1GII4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GII4_CYCTE)

HSP 1 Score: 111 bits (277), Expect = 2.380e-28
Identity = 64/128 (50.00%), Postives = 82/128 (64.06%), Query Frame = 0
Query:   33 VKFKDEE--LTLTYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHNQTTLEEAF 158
            +KF  +E  L L  QKD  DDS Q   V+ LSGGERS+ TL+LLLAL    + PFRVMDEFDVFLDAV+R +A++ ++E A     RQFI ITPQDLSS+T     KI  M+ P +    + T ++  
Sbjct:   11 LKFDHKEGTLDLVVQKDSNDDS-QTDDVKALSGGERSYTTLSLLLALGERLETPFRVMDEFDVFLDAVARRLALRNLIEVAKHMENRQFIFITPQDLSSLTPDPKLKIHFMKAPERNASVEATTQQTL 137          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Match: A0A7S1V7X1_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V7X1_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.720e-27
Identity = 66/136 (48.53%), Postives = 90/136 (66.18%), Query Frame = 0
Query:   13 HFGTTAVTNGRNTAAAVDRNVKFKDEE--LTLTYQKDGGDDSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSRDVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRK 146
            +FG   + N + ++ +    +KF  EE  L L  QKD  D++SQ   V+ LSGGERSF T+ALLL+L    + PFRVMDEFDVFLD V+R +A+K +++ A R + RQFI ITPQDLS +T  D  KI K++ P +
Sbjct:  470 NFGFDEMLNTKGSSGS----LKFDHEEHTLDLVVQKDSKDEASQTADVKALSGGERSFTTIALLLSLGERLETPFRVMDEFDVFLDPVARRLALKTLIDLAKRLNHRQFIFITPQDLSGLTPDDKLKIHKLKAPAR 601          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4M2_ECTSI1.660e-5675.19Smc-like protein n=2 Tax=Ectocarpus TaxID=2879 Rep... [more]
D7G4M1_ECTSI2.130e-5169.92Smc-like protein n=1 Tax=Ectocarpus siliculosus Ta... [more]
F0YEV6_AURAN7.530e-3956.35Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2C434_9STRA1.550e-3245.22Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7R9VE37_9STRA5.200e-3043.31Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2WV71_9STRA9.520e-3047.33Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A8J2X4G0_9STRA6.250e-2949.60Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A836CML4_9STRA6.280e-2949.28P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S1GII4_CYCTE2.380e-2850.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1V7X1_9STRA2.720e-2748.53Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 7..153
e-value: 1.3E-19
score: 73.1
NoneNo IPR availablePANTHERPTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6coord: 31..151
IPR003395RecF/RecN/SMC, N-terminalPFAMPF02463SMC_Ncoord: 60..140
e-value: 1.3E-12
score: 47.6
IPR027132Structural maintenance of chromosomes protein 6PANTHERPTHR19306:SF6STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 6coord: 31..151
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 50..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:2030263..2034995 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17097.1mRNA_E-siliculosus-1a_M_contig9.17097.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 2030098..2036072 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17097.1 ID=prot_E-siliculosus-1a_M_contig9.17097.1|Name=mRNA_E-siliculosus-1a_M_contig9.17097.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=164bp
MPRDLQGKLSPNHFGTTAVTNGRNTAAAVDRNVKFKDEELTLTYQKDGGD
DSSQCKGVRQLSGGERSFATLALLLALRSCHDCPFRVMDEFDVFLDAVSR
DVAIKQVLEFAGRDSTRQFILITPQDLSSVTASDTCKIIKMQPPRKGDHN
QTTLEEAFSAGAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR027132SMC6
IPR003395RecF/RecN/SMC_N