prot_E-siliculosus-1a_M_contig9.17093.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17093.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17093.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length208
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17093.1 vs. uniprot
Match: A0A6H5KN98_9PHAE (PAS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN98_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 3.610e-40
Identity = 77/151 (50.99%), Postives = 100/151 (66.23%), Query Frame = 0
Query:   55 ANRLHCKETRQRKRKQEQLLREEVSILELCKSIVEHGPDLFSIHGFHTTAPFRFLCEDFCDRLQMEPAEFLGRPLASIVDPQDADILENAVARVLDSACDNTGTTRTWTDSPDRAKGCLIDVRVTRRGLSCPAEMSISIGSHGLVVVTRLY 205
            ANR+HC+ETR+RKR+ E LL+EEV IL L K++VE GPDLFS H     APF F CE++  +LQ+ P + +G+PLASIVDP+DA IL  A+  VL          +T     +   G L+ +RV+   +SC A MS+ IGS GLVVVTRLY
Sbjct:   23 ANRIHCRETRERKRRAEALLKEEVEILSLYKALVEEGPDLFSCHRVEPDAPFSFACENYFHQLQLAPEDAVGKPLASIVDPEDAPILAEALNEVL--------ANKTNIGDSEPGSGKLVKLRVSCGSISCSASMSMVIGSQGLVVVTRLY 165          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17093.1 vs. uniprot
Match: A0A6H5KRF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF4_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 2.840e-39
Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 0
Query:   53 REANRLHCKETRQRKRKQEQLLREEVSILELCKSIVEHGPDLFSIHGFHTTAPFRFLCEDFCDRLQMEPAEFLGRPLASIVDPQDADILENAVARVLDSACDNTGTTRTWTDSPDRAKGCLIDVRVTRRGLSCPAEMSISIGSHGLVVVTRLYRS 207
            REANR+HCKETR R+R++E+ L E V +L+LC+SIVEHGPDLFS+H     APF +LC++F  RLQM P   +GR L SIVD ++A  L NA+ +VL+ A                    ++ VR+    + C A MSI+ GSHGL+VVTRLY S
Sbjct:   26 REANRIHCKETRDRRRERERALSEHVELLKLCQSIVEHGPDLFSLHNATIDAPFSYLCDNFTMRLQMPPEAMVGRSLLSIVDEREALSLRNAIFQVLNEAQHXXX----XXXXXXXXXXAVVHVRIAHGQIFCEASMSIACGSHGLIVVTRLYSS 176          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17093.1 vs. uniprot
Match: D7G4L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L6_ECTSI)

HSP 1 Score: 80.5 bits (197), Expect = 8.490e-17
Identity = 39/43 (90.70%), Postives = 40/43 (93.02%), Query Frame = 0
Query:  119 MEPAEFLGRPLASIVDPQDADILENAVARVLDSACDNTGTTRT 161
            MEP EFLGRPLASIVDPQDADIL+NAVARVLDSACDN GTT T
Sbjct:    1 MEPVEFLGRPLASIVDPQDADILKNAVARVLDSACDNNGTTST 43          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17093.1 vs. uniprot
Match: D8LCA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCA0_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 6.910e-16
Identity = 49/153 (32.03%), Postives = 74/153 (48.37%), Query Frame = 0
Query:   76 EEVSILELCKSIVEHGPDLFSIHGFHTTAPFRFLCEDFCDRLQMEPAEFLGRPLASIVDPQDADILENAVARVLDSACDNTGTTRTWTDSPDR------------------------AKGCLIDVRVTRRGLSCPAEMSISIGSHGLVVVTRL 204
            +E  +LE+ + IVE+GPDLFS+HG    APF F+ +    + Q+     LG+PL ++VDP D  +L  A+  VL     + G +    D                              G ++++ V   G SC A MSI++G  GL+VVTR+
Sbjct:    8 QEEDVLEVYRDIVENGPDLFSLHGTTLDAPFSFVSKSLNLKFQLPSEYLLGKPLKTVVDPDDWGVLTTALLAVLGPNPTSGGKSGNSRDGGXXXXXXXXXXXXXXXXXXXXXXXVAVGSGTVVELNVMCGGASCLASMSIALGCRGLIVVTRM 160          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17093.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KN98_9PHAE3.610e-4050.99PAS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KRF4_9PHAE2.840e-3949.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G4L6_ECTSI8.490e-1790.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LCA0_ECTSI6.910e-1632.03Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.450.20coord: 62..202
e-value: 4.8E-5
score: 25.4
IPR035965PAS domain superfamilySUPERFAMILY55785PYP-like sensor domain (PAS domain)coord: 65..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:1988057..1991545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17093.1mRNA_E-siliculosus-1a_M_contig9.17093.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 1988057..1991545 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17093.1 ID=prot_E-siliculosus-1a_M_contig9.17093.1|Name=mRNA_E-siliculosus-1a_M_contig9.17093.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=208bp
MMSGEIGARVPSVNSVARASCNALADSSRSYSSNSSNSSSGGVTDDATRD
ALREANRLHCKETRQRKRKQEQLLREEVSILELCKSIVEHGPDLFSIHGF
HTTAPFRFLCEDFCDRLQMEPAEFLGRPLASIVDPQDADILENAVARVLD
SACDNTGTTRTWTDSPDRAKGCLIDVRVTRRGLSCPAEMSISIGSHGLVV
VTRLYRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035965PAS-like_dom_sf