mRNA_E-siliculosus-1a_M_contig9.17008.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: A0A6H5L0Y9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y9_9PHAE) HSP 1 Score: 1001 bits (2589), Expect = 0.000e+0 Identity = 862/1173 (73.49%), Postives = 878/1173 (74.85%), Query Frame = 3
Query: 264 EGRGRRANDSPPFPAXXXXXXXXXXXXAKLGVVRVGLSLLAMGDFALASRRSPAMPSAATPTRVPSSTAGFHPRGGGRAEHAANQITKRRAVGNRGSGECFVARXXXXXXXXXXXXXXXXXXXGERRRAMKTKAVLRRRGRVAVAAVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPASRAGMSAGLPXXXXXXXXXXXXXXXXXXXXXXXSTPVTLPTPTNGAGANGASGTXXAATXXXXXXXXXXXXXXXXXESGTVKAVAAPRTVNGVKSVVAAGGTKSLGVLRPAEMGGSRVRKIKVKGLYARARKILRSSSPSASETAAAILEEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPDPSAAWAAAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGNEKRALELMARAMENEPDNARARVGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGQEDGVVAGDPVVEHDGDASDDGTILGEAPDAVAGGSGGPAXXXXXXXXXXXXVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRESSEDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAKMGEPDNAREYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGSDVKARKASIQLERGGRVLELGVRACXXXXXXHRCWAQMEHQLGNTAEARRRFERXXXXXXXXXXXXXXXXXXXXXXXXXXFLEKLKARGEKALVESGAAPDKITEYQQQMEAFKSFARFDATFSSERMASSLDQSSLEDFDFDW 3782
EGRGRRANDSPPFPA XXXX AKLGVVRVGLSLLAMGDFALASRRSP +PSAATPTRVPSSTAGF RGGGRAEHAANQITKRRA+GNRGS M A P STPVTL TPTNGA A+GASGT AAT +SGTVK+V APRTVNGVKSVVA GGTK LGVLRPAEMG SR RKIKVKGLYARARKILRSSSPSASETAAAILEEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKR +GSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGG GSPDPSAAWAAAGDRPKKRSAEEAED+DQG+TALLMAWANFEESRGNEKRALELMA+AMENEPDNARARVGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSK+TAAGQE VVAGDPVVE+ GDASDDGTILGEA DAVAGGSGG A XXXXXXXXX VSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKA TIFARGIRESSEDVSFLCHSLGSLELAADRLGEARAVFLAG+ERYPNGSQLLLGAGLAIAKMGEPDNARE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXXXXXXXXXXXXXF+EKLKARGEKALVESGAAPDKI E+QQQMEAFKSFARFDATFSSERMA+SLD SSLE+FDFDW
Sbjct: 23 EGRGRRANDSPPFPAACGNTSGXXXXGAKLGVVRVGLSLLAMGDFALASRRSPGIPSAATPTRVPSSTAGFRHRGGGRAEHAANQITKRRAMGNRGSATT--------------------------------------------------------------------------------------------MKATTPPP---------------------STPVTLLTPTNGASASGASGTSGAATGAYGSASTNGAAPGVRADSGTVKSVVAPRTVNGVKSVVAVGGTKRLGVLRPAEMGSSRARKIKVKGLYARARKILRSSSPSASETAAAILEEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRAVVECPGNAHLWQSWGMLQAKFGDCAKARISFSNGLEADPGRMRYSSPTFLPSYS-----------QGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGEGSPDPSAAWAAAGDRPKKRSAEEAEDSDQGLTALLMAWANFEESRGNEKRALELMAKAMENEPDNARARVGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKETAAGQEQDVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGTAAEXXXXXXXXXGVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKARP-TIFARGIRESSEDVSFLCHSLGSLELAADRLGEARAVFLAGVERYPNGSQLLLGAGLAIAKMGEPDNAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXFVEKLKARGEKALVESGAAPDKIKEFQQQMEAFKSFARFDATFSSERMATSLDHSSLEEFDFDW 1060
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: D7G1I2_ECTSI (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I2_ECTSI) HSP 1 Score: 768 bits (1983), Expect = 8.910e-253 Identity = 715/903 (79.18%), Postives = 723/903 (80.07%), Query Frame = 3
Query: 1074 AVAAPRTVNGVKSVVAAGGTKSLGVLRPAEMGGSRVRKIKVKGLYARARKILRSSSPSASETAAAILEEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPDPSAAWAAAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGNEKRALELMARAMENEPDNARARVGRARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGQEDGVVAGDPVVEHDGDASDDGTILGEAPDAVAGGSGGPAXXXXXXXXXXXXVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRESSEDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAKMGEPDNAREYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQGGSDVKARKASIQLERGGRVLELGVRACXXXXXXHRCWAQMEHQLGNTAEARRRFERXXXXXXXXXXXXXXXXXXXXXXXXXXFLEKLKARGEKALVESGAAPDKITEYQQQMEAFKSFARFDATFSSERMASSLDQSSLEDFDFDW 3782
AV APRTVNGVKSVVAAGGTKSLGVLRPAEMGGSR R+IKVKGLYARARKILRSSSPSASETAAAILEEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPDPSAAWAAAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGNEKR+LELMA+AMENEPDNARARVGRAR LKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAG + GVVAGDPVVE+ GDASDDGTILGEA DAVAGGSGG A XXXX VSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHAR+VYKRGIAARCSGAVHVWQG ERYP+GSQLLLGAGLAIAKMGEPDNARE XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXX XXXXXXXXXXXXXXXXXXXXXXFLEKLKARGEKALVESGAAPDKI E+QQQMEAFKSFARFDATFSSERMASSLDQSSLEDFDFDW
Sbjct: 90 AVVAPRTVNGVKSVVAAGGTKSLGVLRPAEMGGSRARRIKVKGLYARARKILRSSSPSASETAAAILEEALTVDPQDGHSWLLLARTREAMGDVNAASDVFKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAREILEGSRQSVAISQALAELLATHGQVEEGRGLLQKAMDRLEKAASARSKRSGGGGSPDPSAAWAAAGDRPKKRSAEEAEDADQGVTALLMAWANFEESRGNEKRSLELMAKAMENEPDNARARVGRARFEMRRGNMRDARIFLSEAANLPQEDGTLFSMWATLEIKEGNLETALKIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGPKYGVVAGDPVVEYVGDASDDGTILGEASDAVAGGSGGTADENDGXXXXEGGVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARNVYKRGIAARCSGAVHVWQGXXXXXXXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERYPSGSQLLLGAGLAIAKMGEPDNAREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------XXXXXXXXXXXXXXXXXXXXXXFLEKLKARGEKALVESGAAPDKIKEFQQQMEAFKSFARFDATFSSERMASSLDQSSLEDFDFDW 977
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: A0A7S3LJ22_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LJ22_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.080e-21 Identity = 64/163 (39.26%), Postives = 87/163 (53.37%), Query Frame = 3
Query: 2502 GPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRESS-----------EDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAKMGEPDNAR 2957
G ++ RLFE ++ DP HGP YN+YG+ GNV AR +++RG+ C+ A V+ G+ KLE S GN A+ + +G+ ++ E SFL H+LG LEL + EA +F GI RY N SQLLLGA L AK+G AR
Sbjct: 204 GTMNFTMVERLFEEALMLDPRHGPAYNSYGNAHLNRGNVIDARGIFERGVKNDCTDAASVYHGYAKLELSLGNVKRAK-----LLLKKGLAKARRQDMGTDSPHRERASFLTHTLGMLELNSAEPKEALTIFTDGINRYGNSSQLLLGAALCEAKLGNEAKAR 361
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: W7TSL7_9STRA (PsbB mRNA maturation factor n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSL7_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.270e-21 Identity = 61/139 (43.88%), Postives = 85/139 (61.15%), Query Frame = 3
Query: 2523 ARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRESS--EDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAK 2933
AR+LF LG+ ADP+HGPLYNAYG ME K+GN+ A+ V++ G+ A C V G+ L + N AR ++ RG+ E+ ++V FL HSLG LE+ ++ +A VF ++YP SQLL+GAGLA K
Sbjct: 511 ARKLFMLGMAADPSHGPLYNAYGRMEEKIGNLTGAQEVFRMGVEAHCPDMPSVLNGWAMLSLKQRNYAQAR-----SLLQRGLSENKLGKNVGFLYHSLGMLEMKLGKIEDAWRVFKEATDKYPRNSQLLVGAGLAAEK 644
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: A0A7S2DH37_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH37_9STRA) HSP 1 Score: 110 bits (274), Expect = 1.460e-20 Identity = 67/154 (43.51%), Postives = 82/154 (53.25%), Query Frame = 3
Query: 2490 EEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRE----------SSEDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGL 2921
E+++G EARRLFELGI ADP+HGPLYNAYG+MEA+ N + AR V +RGIAA+C+ HVW G G L+ G+ DAAR + F GIR ++ DVSF RYPN S LLLGA L
Sbjct: 312 EKQKGKIRVVEARRLFELGIKADPSHGPLYNAYGAMEARHRNFQEARLVLERGIAAKCTDMAHVWHGLGTLDLRIGDVDAAR-----STFKEGIRRFDKKFSYMSSANADVSFXXXXXXXXXXXXXXXXXXXXXXXXXXXRYPNNSYLLLGAAL 460
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: A0A6S8QV48_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8QV48_9STRA) HSP 1 Score: 108 bits (269), Expect = 8.620e-20 Identity = 61/155 (39.35%), Postives = 83/155 (53.55%), Query Frame = 3
Query: 2514 YEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRESSEDVS------FLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAKMGEPDNARE 2960
Y + RLF+ +L DP HGP+YNAYG+ME K+GNVE AR +Y+ G+ A C V + I +S D + FL H+LG LEL +R EA+A+F GI+++ N SQLLLGA L+ K+G D AR+
Sbjct: 557 YTKIARLFQEALLLDPRHGPVYNAYGNMELKMGNVEEARRIYQNGVYANCRDLASVXXXXXXXXXXXXXXXXXXXXXKKGLREVRIHDSGMDSNRRKRAVFLAHTLGMLELNCNRAAEAKAIFEIGIDQHGNSSQLLLGAALSEVKLGNEDAARK 711
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: A0A1Z5JWF6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWF6_FISSO) HSP 1 Score: 103 bits (258), Expect = 1.520e-18 Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 3
Query: 2526 RRLFELGILADPTHGPLYNAYGSMEAKLGNVEH-ARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRESSED------VSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAKMGEPDNAR 2957
++LFE +L DP H P YNAY + + E ARS+++RG+ A+C A ++ GF KLE + GN D+ARK A +E +D FL H+LG LEL ++R+ A VF G+ +Y N SQLLLGA L ++G D AR
Sbjct: 439 KQLFEEALLIDPRHAPAYNAYARCVFEQEDDERQARSIFERGVRAKCPDAASLYHGFAKLELALGNIDSARKLLIEGRNAAKRQEIGKDSPHRERALFLMHTLGMLELNSNRIVSALEVFSDGVTQYGNSSQLLLGAALCEVRLGNVDKAR 589
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: A0A835Z4V8_9STRA (PsbB mRNA maturation factor Mbb1, chloroplast n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4V8_9STRA) HSP 1 Score: 101 bits (252), Expect = 7.790e-18 Identity = 86/258 (33.33%), Postives = 111/258 (43.02%), Query Frame = 3
Query: 2202 YRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGQEDGVVAGDPVVEHDGDASDDGTILGEAPDAVAGGSGGPAXXXXXXXXXXXXVSRTEEEEGPPSYEE----ARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRESSEDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAKMGEPDNAREY 2963
YR S + P APA+VAWAL+ KLA AER A++ + P + D DA+D A+ +G + R E E ARRLFELGI ADP HGPLYNAYG+ EA+ G+V+ AR+V++RG+AA C+ VW G + G +EDVSFL R P S LLLGA LA ++G ARE+
Sbjct: 363 YRASTQIRPTAPAFVAWALLEDKLA--AERAAAAXXAT------DLTPSPNSKEDDDATD----------AILTSTG-----------KRLGLERARSAEADADVERCRANARRLFELGIRADPKHGPLYNAYGATEARWGDVDAARAVFRRGVAAHCTDMASVWHGLXXXXXXXXXXXXXXXXXXXXMSEAGA---TEDVSFLSXXXXXXXXXXXXXXXXXXXXXXXXXRAPTNSPLLLGAALAEVRLGCLAEAREF 588
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: A0A7S1Z7F3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z7F3_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 3.340e-17 Identity = 85/296 (28.72%), Postives = 129/296 (43.58%), Query Frame = 3
Query: 2094 KIAEAATARFPWDKFLLQTMGTVHGKLGRYEEAIECYRRSIALSPAAPAYVAWALVVAKLAERAERNASSKKTAAGQEDGVVAGDPVVEHDGDASDDGTILGEAPDAVAGGSGGPAXXXXXXXXXXXXVSRTEEEEGPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEAS------------EGNRDAARKASSSTIFARGIRESS--EDVSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAKMG 2939
KI ++P D L Q G V + G Y A + Y S+ + P+AP VA+A++ +L E +A+ + +E+G + +R ++ + ++ RLFE +L DP HGP+YNAYG+ME + G+V AR V++RG ARC+ A V EG ++ R G+ ++S E +FL H+LG LEL A+R +A+ VF GI R+ SQLLLG+ L K+G
Sbjct: 437 KILMRGIEQYPNDATLQQAAGKVEERFGNYTGARDLYGGSLRIEPSAPTLVAYAML--ELRHPTETSAAVEV----EEEGAIG----------------------------------------------NRNKKPKA--NFTMVERLFEEALLLDPKHGPVYNAYGNMELQRGDVAKARKVFERGENARCTDAASVXXXXXXXXXXXXXXXXXXXILVEGLQEVER--------LEGVMDNSYHERAAFLAHTLGMLELNANRAAQAKEVFANGISRHGTSSQLLLGSALCEVKLG 670
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Match: B7G4B1_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G4B1_PHATC) HSP 1 Score: 97.4 bits (241), Expect = 1.340e-16 Identity = 56/158 (35.44%), Postives = 80/158 (50.63%), Query Frame = 3
Query: 2502 GPPSYEEARRLFELGILADPTHGPLYNAYGSMEAKLGNVEHARSVYKRGIAARCSGAVHVWQGFGKLEASEGNRDAARKASSSTIFARGIRESSED------VSFLCHSLGSLELAADRLGEARAVFLAGIERYPNGSQLLLGAGLAIAKMGEPDNAR 2957
G ++ + LFE IL DP HGP YN+YG++E + GN+ AR++++RGI A CS V +++ D FL H+LG LEL ++R +A ++F+ G+ RY N SQLLLGA L K+G NAR
Sbjct: 393 GEANFTRVKALFEEAILLDPRHGPAYNSYGNLELRQGNIRTARNIFERGILAHCSDVASVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQDAGMDSPHRERALFLSHTLGMLELNSNRPIDALSIFIDGVNRYGNSSQLLLGAALCEVKLGNEVNAR 550 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17008.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig9.17008.1 >prot_E-siliculosus-1a_M_contig9.17008.1 ID=prot_E-siliculosus-1a_M_contig9.17008.1|Name=mRNA_E-siliculosus-1a_M_contig9.17008.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=1133bp MGDFALASRRSPAMPSAATPTRVPSSTAGFHPRGGGRAEHAANQITKRRAback to top mRNA from alignment at E-siliculosus-1a_M_contig9:966814..985094+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig9.17008.1 ID=mRNA_E-siliculosus-1a_M_contig9.17008.1|Name=mRNA_E-siliculosus-1a_M_contig9.17008.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=18281bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:966814..985094+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig9:966814..985094+ >mRNA_E-siliculosus-1a_M_contig9.17008.1 ID=mRNA_E-siliculosus-1a_M_contig9.17008.1|Name=mRNA_E-siliculosus-1a_M_contig9.17008.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=6798bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig9:966814..985094+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |