prot_E-siliculosus-1a_M_contig9.16992.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_M_contig9.16992.1
Unique Name	prot_E-siliculosus-1a_M_contig9.16992.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length	175

Homology

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BLAST of mRNA_E-siliculosus-1a_M_contig9.16992.1 vs. uniprot
Match: D7G1J6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J6_ECTSI)

HSP 1 Score: 331 bits (849), Expect = 1.550e-114
Identity = 166/175 (94.86%), Postives = 171/175 (97.71%), Query Frame = 0

Query:    1 MAWVMVVYVAAAGLFFVCTNRMTFPIRMLVRIFELYDKWGEPNTLQLCGNMKLALHVGLHRNVLWQAYGTNASLKAAVFSVLSRLEPGDDYTQVLLVARSFQDVFDLSARFQTFAEVTGTTITVLKALGSHWEEEVRAQVVIGTASTLSILLDRTIVNPTNVQAFVVDLGYDESS 175
            MAWVMVVYVAAAGLFFVCTNRMTFPIR+LVRIFELYDKWGEPNT+QLCGNMKLALHVGLHRNVLWQAYGTNASLKAAVFSVLSRLEPGDDYTQVLLVARS QDVFDLSARFQTFA+VTGTTITVLKALGSHWEEEV+AQVVIGTASTLSILLDR IVNP NVQAFVV LGYDES+
Sbjct:    1 MAWVMVVYVAAAGLFFVCTNRMTFPIRILVRIFELYDKWGEPNTVQLCGNMKLALHVGLHRNVLWQAYGTNASLKAAVFSVLSRLEPGDDYTQVLLVARSLQDVFDLSARFQTFADVTGTTITVLKALGSHWEEEVQAQVVIGTASTLSILLDRAIVNPANVQAFVVHLGYDEST 175

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BLAST of mRNA_E-siliculosus-1a_M_contig9.16992.1 vs. uniprot
Match: A0A6H5KVH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVH4_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 3.130e-75
Identity = 127/173 (73.41%), Postives = 134/173 (77.46%), Query Frame = 0

Query:    1 MAWVMVVYVAAAGLFFVCTNRMTFPIRMLVRIFELYDKWGEPNTLQLCGNMKLALHVGLHRNVLWQAYGTNASLKAAVFSVLSRLEPGDDYTQVLLVARSFQDVFDLSARFQTFAEVTGTTITVLKALGSHWEEEVRAQVVIGTASTLSILLDRTIVNPTNVQAFVVDLGYDE 173
            MAWVMVVYVAAAG+FFVCTNRMTFPIR+LVRIFEL+DKWGEPNTLQLCGNMKLALHVGL RNVL  A+GT+ASLKAAVFSVLSRLEPGDDY QVL                              KALGSHWEEEVRAQVVIGTA TLSILLDR+IVNP NV+ FVV LG DE
Sbjct:  186 MAWVMVVYVAAAGIFFVCTNRMTFPIRILVRIFELHDKWGEPNTLQLCGNMKLALHVGLRRNVLCDAHGTDASLKAAVFSVLSRLEPGDDYAQVL------------------------------KALGSHWEEEVRAQVVIGTAWTLSILLDRSIVNPANVETFVVGLGNDE 328

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BLAST of mRNA_E-siliculosus-1a_M_contig9.16992.1 vs. uniprot
Match: D7G1K0_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K0_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 6.320e-74
Identity = 133/175 (76.00%), Postives = 148/175 (84.57%), Query Frame = 0

Query:    1 MAWVMVVYVAAAGLFFVCTNRMTFPIRMLVRIFELYDKWGEPNTLQLCGNMKLALHVGLHRNVLWQAYGTNASLKAAVFSVLSRLEPGDDYTQVLLVARSFQDVFDLSARFQTFAEVTGTTITVLKALGSHWEEEVRAQVVIGTASTLSILLDRTIVNPTNVQAFVVDLGYDESS 175
            MAWVMVVYVAAAGLFFVCTNRMTFPIR+LV IFELYDKWGEPNT+QL      AL VGLHRNVL  A+GT+ASLKAA+FSVLSRLEPGD+YTQVL+VARSFQD  DLS  F  FA +T T +TV  AL S W+EEVRAQVVIGTASTLSILLDR +++P+NV AF VDLG D+SS
Sbjct:  814 MAWVMVVYVAAAGLFFVCTNRMTFPIRILVWIFELYDKWGEPNTVQL------ALRVGLHRNVLCHAHGTDASLKAALFSVLSRLEPGDNYTQVLVVARSFQDECDLSVLFHKFAALTDTPMTVSMALHSDWQEEVRAQVVIGTASTLSILLDRGVLDPSNVTAFAVDLGNDDSS 982

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BLAST of mRNA_E-siliculosus-1a_M_contig9.16992.1 vs. uniprot
Match: A0A6H5K8G9_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8G9_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 2.020e-29
Identity = 78/175 (44.57%), Postives = 87/175 (49.71%), Query Frame = 0

Query:    1 MAWVMVVYVAAAGLFFVCTNRMTFPIRMLVRIFELYDKWGEPNTLQLCGNMKLALHVGLHRNVLWQAYGTNASLKAAVFSVLSRLEPGDDYTQVLLVARSFQDVFDLSARFQTFAEVTGTTITVLKALGSHWEEEVRAQVVIGTASTLSILLDRTIVNPTNVQAFVVDLGYDESS 175
            MAWVMVVYVAAAG+FFVCTNRMTFPIR+LVRIFEL+DKWGEPNTLQ                                                                             V  AL   W++EVRAQVVIGTASTLSILLDR ++ P+NV  F VDLG D+SS
Sbjct:  759 MAWVMVVYVAAAGIFFVCTNRMTFPIRILVRIFELHDKWGEPNTLQ-----------------------------------------------------------------------------VSIALYPDWQQEVRAQVVIGTASTLSILLDRGVLEPSNVTVFAVDLGNDDSS 856

[Close]

BLAST of mRNA_E-siliculosus-1a_M_contig9.16992.1 vs. uniprot
Match: A0A6H5K8H0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H0_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 4.390e-18
Identity = 42/47 (89.36%), Postives = 46/47 (97.87%), Query Frame = 0

Query:    1 MAWVMVVYVAAAGLFFVCTNRMTFPIRMLVRIFELYDKWGEPNTLQL 47
            MAWVMVVYVAAAG+FFVCT RMTFPIR+LVRIFEL+DKWGEPNTLQ+
Sbjct:  525 MAWVMVVYVAAAGIFFVCTYRMTFPIRILVRIFELHDKWGEPNTLQV 571

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_M_contig9.16992.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_M_contig9.16992.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
D7G1J6_ECTSI	1.550e-114	94.86	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KVH4_9PHAE	3.130e-75	73.41	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G1K0_ECTSI	6.320e-74	76.00	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K8G9_9PHAE	2.020e-29	44.57	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5K8H0_9PHAE	4.390e-18	89.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..24
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 25..175
None	No IPR available	TMHMM	TMhelix		coord: 2..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_M_contig9	contig	E-siliculosus-1a_M_contig9:792740..794876 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_M_contig9.16992.1	mRNA_E-siliculosus-1a_M_contig9.16992.1	Ectocarpus siliculosus Ec864m_EcPH12_78m male	mRNA	E-siliculosus-1a_M_contig9 792740..794876 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.16992.1 ID=prot_E-siliculosus-1a_M_contig9.16992.1|Name=mRNA_E-siliculosus-1a_M_contig9.16992.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=175bp
MAWVMVVYVAAAGLFFVCTNRMTFPIRMLVRIFELYDKWGEPNTLQLCGN
MKLALHVGLHRNVLWQAYGTNASLKAAVFSVLSRLEPGDDYTQVLLVARS
FQDVFDLSARFQTFAEVTGTTITVLKALGSHWEEEVRAQVVIGTASTLSI
LLDRTIVNPTNVQAFVVDLGYDESS