prot_E-siliculosus-1a_F_contig1049.350.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1049.350.1
Unique Nameprot_E-siliculosus-1a_F_contig1049.350.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length165
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: D8LB85_ECTSI (Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB85_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 3.410e-25
Identity = 61/137 (44.53%), Postives = 85/137 (62.04%), Query Frame = 0
Query:   10 RRTYRQCARQAAGCVACRWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 146
            RRTY+    ++      RW LF  S  +F+LR+Y  +GW++V Y +GI +LNN + FL+P+I P++E   GL       FR F      RL EF  W SSQK LL+A  MT+F LFDIPV+ PI+++YF+ LM  T+
Sbjct:   17 RRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGP-GLPTSGSDEFRPF----SRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTM 148          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A6U4CB41_9STRA (Protein RER1 n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CB41_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.000e-21
Identity = 55/137 (40.15%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   11 RTYRQCARQAAGCVACRWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLS-ERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 146
            RTY+    ++   V  RWL FA   A+++LR+Y   G+++V Y++GI +LNN + FLTP++ P+A+R  GL           FRP    RL EF  W S  K L+    MT+FG+FD+PV+ PI+++YF+ L + T+
Sbjct:   22 RTYQHYLDKSTIYVVPRWLGFAGVLALYLLRIYMVNGFFLVTYALGIFLLNNLIGFLTPQMDPEADRGDGLGLPTTNSDVDEFRP-FERRLPEFQFWHSCAKGLVYCFLMTFFGVFDVPVFWPILLLYFIVLFSLTM 157          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A7R9YCX7_9STRA (Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX7_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 2.730e-20
Identity = 54/137 (39.42%), Postives = 84/137 (61.31%), Query Frame = 0
Query:   11 RTYRQCARQAAGCVACRWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLS-ERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 146
            RTY+    ++A   A RWL F    A+++LR+Y   G+++V Y++GI +LNN + FLTP++ P+A+R  GL      +    FRP    RL EF  W S  K L+    MT+F +FD+PV+ PI+++YF+ L + T+
Sbjct:   20 RTYQHYLDKSAIYTAPRWLSFFGILALYLLRIYVVNGFFLVTYALGIFLLNNLIGFLTPQLDPEADRGDGLGLPTTNNDVDEFRP-FERRLPEFQFWYSCIKGLVYCFMMTFFSVFDVPVFWPILLIYFIVLFSLTM 155          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A0G4H715_VITBC (Protein RER1 n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H715_VITBC)

HSP 1 Score: 91.7 bits (226), Expect = 3.750e-20
Identity = 48/128 (37.50%), Postives = 82/128 (64.06%), Query Frame = 0
Query:   27 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRG--LSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTLCKVFRE 152
            RWL F A  A+F+LR+Y  +G+Y+V Y +GI +LN  + FL+P++ P+ E   G  L  R    +R F+ R+     EF CW+S+ + +++++ MT+F +FD+PV+ PI+++YF+ L   T+ +  R 
Sbjct:   37 RWLFFFAMVALFVLRIYLTQGFYIVTYGLGIYLLNLLIGFLSPQVDPETE---GPVLPVRDAEEYRPFQRRLP----EFKCWQSATRAVVISITMTFFRMFDLPVFWPILLMYFLVLFVLTMKQQIRH 157          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A4D8YZI5_SALSN (Protein RER1 n=2 Tax=Salvia TaxID=21880 RepID=A0A4D8YZI5_SALSN)

HSP 1 Score: 90.1 bits (222), Expect = 1.810e-19
Identity = 51/120 (42.50%), Postives = 76/120 (63.33%), Query Frame = 0
Query:   27 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 146
            RWL+  A+AA++ILRVY  RG+YV++Y + I +LN  + FL+P++ P+ E L G S   +H    FRP +  RL EF  W +  K   VA  +T+F +FD+PV+ PI+  Y+ FL   T+
Sbjct:   40 RWLVTLAAAAIYILRVYYARGFYVISYGLSIYILNLLIGFLSPKVDPELELLDGPSSPTKH-SEEFRPFVR-RLPEFLFWYAITKAFCVAFLLTFFSMFDVPVFWPILFFYWFFLFFLTM 157          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A6I9TR45_SESIN (Protein RER1 n=1 Tax=Sesamum indicum TaxID=4182 RepID=A0A6I9TR45_SESIN)

HSP 1 Score: 89.0 bits (219), Expect = 5.050e-19
Identity = 51/123 (41.46%), Postives = 79/123 (64.23%), Query Frame = 0
Query:   24 VACRWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 146
            +A RWL   A+AA+++LRVY  +G+YV++Y +GI +LN  + F++P++ P+ E L G S   +     FRP +  RL EF  W ++ K   VA  MT+F +FD+PV+ PI+  Y+VFL   T+
Sbjct:   37 IAKRWLGTLAAAAIYVLRVYYVQGFYVISYGLGIYILNLLIGFMSPKVDPELEVLDGASLPTKETDE-FRPFVR-RLPEFKFWYATTKAFCVAFLMTFFSIFDVPVFWPILFFYWVFLFFLTM 157          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A5A7PSB8_STRAF (Protein RER1 n=1 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7PSB8_STRAF)

HSP 1 Score: 89.0 bits (219), Expect = 5.050e-19
Identity = 50/122 (40.98%), Postives = 76/122 (62.30%), Query Frame = 0
Query:   27 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRR--HRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 146
            RWL   A+A++++LRVY  +G+YV++Y +GI +LN  + F++P++ P+ E L G S   R  H FR F  R+     EF  W +  K   VA  MT+F +FD+PV+ PI+  Y+VFL   T+
Sbjct:   40 RWLGTLAAASIYVLRVYYVQGFYVISYGLGIYILNLLIGFMSPKVDPELEALDGASSPMRDPHEFRPFIRRLP----EFMFWYAITKAFCVAFMMTFFSVFDVPVFWPILFFYWVFLFFLTM 157          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A2Z7B3C3_9LAMI (Protein RER1 n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7B3C3_9LAMI)

HSP 1 Score: 89.0 bits (219), Expect = 5.050e-19
Identity = 50/119 (42.02%), Postives = 75/119 (63.03%), Query Frame = 0
Query:   27 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFT 145
            RWL   A+AA+++LRVY  RG+Y+++Y +GI +LN  + FL+P++ P+ E L G S   +     FRP +  RL EF  W ++ K   VA  MT+F  FD+PV+ PI+  Y++FL   T
Sbjct:   40 RWLGTLAAAAIYVLRVYFGRGFYIISYGIGIYILNLLIGFLSPKVDPEIEALDGASSPTKDTDE-FRPFVH-RLPEFKFWYATTKAFCVAFFMTFFSAFDVPVFWPILFFYWLFLFFLT 156          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: UPI0018ADEC17 (protein RER1B-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018ADEC17)

HSP 1 Score: 88.6 bits (218), Expect = 6.940e-19
Identity = 55/120 (45.83%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   27 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 146
            RWL   A AA++ILRVY  +G+Y+V+Y +GI VLN  + FL+P + P+ E L G S   R     F+P I  RL EF  W S  K L VA  MT+F +FD+PV+ PI++ Y+V L   T+
Sbjct:   40 RWLGTLAVAAIYILRVYFVQGFYIVSYGLGIYVLNLLIGFLSPMVDPELEVLEGASLPTRGSDE-FKPFIR-RLPEFKFWYSITKALCVAFVMTFFSIFDVPVFWPILLFYWVVLFVLTM 157          
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Match: A0A2I0A1A1_9ASPA (Protein RER1 n=1 Tax=Apostasia shenzhenica TaxID=1088818 RepID=A0A2I0A1A1_9ASPA)

HSP 1 Score: 88.2 bits (217), Expect = 9.550e-19
Identity = 54/120 (45.00%), Postives = 75/120 (62.50%), Query Frame = 0
Query:   27 RWLLFAASAAVFILRVYTERGWYVVAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRLREFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTL 146
            RWL   A AAV++LRVY  +G+Y+V+Y +GI VLN  + FL+P + P+ E L G S   R     F+P I  RL EF  W S  K   VA  MT+F +FD+PV+ PI++ Y++ L A T+
Sbjct:   41 RWLGSLAVAAVYVLRVYLVQGFYIVSYGLGIYVLNLLIGFLSPMVDPELETLDGASLPTRGSDE-FKPFIR-RLPEFKFWYSITKAFCVAFLMTFFSIFDVPVFWPILLFYWIVLFALTM 158          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1049.350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB85_ECTSI3.410e-2544.53Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A6U4CB41_9STRA6.000e-2140.15Protein RER1 n=4 Tax=Phaeomonas parva TaxID=124430... [more]
A0A7R9YCX7_9STRA2.730e-2039.42Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A0G4H715_VITBC3.750e-2037.50Protein RER1 n=1 Tax=Vitrella brassicaformis (stra... [more]
A0A4D8YZI5_SALSN1.810e-1942.50Protein RER1 n=2 Tax=Salvia TaxID=21880 RepID=A0A4... [more]
A0A6I9TR45_SESIN5.050e-1941.46Protein RER1 n=1 Tax=Sesamum indicum TaxID=4182 Re... [more]
A0A5A7PSB8_STRAF5.050e-1940.98Protein RER1 n=1 Tax=Striga asiatica TaxID=4170 Re... [more]
A0A2Z7B3C3_9LAMI5.050e-1942.02Protein RER1 n=1 Tax=Dorcoceras hygrometricum TaxI... [more]
UPI0018ADEC176.940e-1945.83protein RER1B-like n=1 Tax=Dioscorea cayennensis s... [more]
A0A2I0A1A1_9ASPA9.550e-1945.00Protein RER1 n=1 Tax=Apostasia shenzhenica TaxID=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PIRSFPIRSF016013AtER_Rer1pcoord: 1..153
e-value: 5.0E-33
score: 112.3
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 9..149
e-value: 3.0E-32
score: 111.7
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 10..148
NoneNo IPR availablePANTHERPTHR10743:SF11PROTEIN RER1Ccoord: 10..148
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 133..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 152..164
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 128..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..110
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
NoneNo IPR availableTMHMMTMhelixcoord: 128..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1049contigE-siliculosus-1a_F_contig1049:30319..36647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1049.350.1mRNA_E-siliculosus-1a_F_contig1049.350.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1049 29314..36828 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1049.350.1 ID=prot_E-siliculosus-1a_F_contig1049.350.1|Name=mRNA_E-siliculosus-1a_F_contig1049.350.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=165bp
MMITASHHPRRTYRQCARQAAGCVACRWLLFAASAAVFILRVYTERGWYV
VAYSVGILVLNNTVQFLTPRIGPDAERLRGLSERRRHRFRLFRPRIGGRL
REFPCWRSSQKWLLVALAMTYFGLFDIPVYTPIIVVYFVFLMAFTLCKVF
RERRRASGRRMWML*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1