prot_E-siliculosus-1a_M_contig9.17096.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig9.17096.1
Unique Nameprot_E-siliculosus-1a_M_contig9.17096.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length2429
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig9.17096.1 vs. uniprot
Match: D7G4L9_ECTSI (Cellulosome anchoring protein, cohesin region n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L9_ECTSI)

HSP 1 Score: 657 bits (1695), Expect = 3.780e-192
Identity = 570/835 (68.26%), Postives = 585/835 (70.06%), Query Frame = 0
Query: 1627 AAPTSTTKPPVAAPTXXXXXXXXXXXXXPSMPSAXXXXXXXXXXXXXXXXXTSMSYDFDFDGPTPAPVMEGVQPVTTPGMPSPXXXXTXXXSPXXXXXXAETTTAPASSDRQRSPSSPSLSPXXXPVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAPAGGKNQAPYPTDAPRTLXXXXXXXXXXXXXXXXXXXXXXXMXYXXXXXXXXXXXXXXXLQXXXXXXXXXXXXXXTPPSSRSPTAPVEETTTXXXVSSDRRQSPSSP----------SPSPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDAXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPPVPSPTMXXXXXXXXXXXXTAMSYDFNLDDTTPAPVSEGLQPSPTGAPRTDPAAVPTSTTEXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------EPISQPSERGAVAPTSVGTTPAPSTPGASWTQAPATAGAPPPASGDVFTCPPPVPCICEAPAAPPPTAAPTSEATSVTAAAGVXXXXAAMPTAAHPGTPTSNTPSPAHDGSLPMATPSXTPTPTPHNQTTPTMPGGSDSSTDEFEDDDDGLFYLPEDSDSMDGFQXXXXXXXXPDGEFDEPSATPAPRATPVPVAGRSQPHTPMPVVVADEDEEEVDCVSLLSPEMSTELAQKDKGVYYEKDCQGLHCNMFGIGWDCRACYMDCAACEGDQEDLGTADLAMCPSEFPRIGGQTQTCISACSAMRKTRYRRRRRRLRGQ 2428
            AAPTSTTKPPVAAPTXXXXXXXXXXX  PSMPS XXXXXXXXXXXXXXXXX  MSYDF FDGPTPAPV+EGVQPV TPGMP  XXXX XXX  XXXXX AETTTAPASSDRQ+SP SPS SPXXX VV  XXXXXXXXXXXXXXXXXXX   XXX   LAPAGG+NQAP PT  P  +                       M Y               LQ              T   SRSPTAPVEETTT   VSSD+RQS S            +P+P++  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                      ATPPVPSPTMXXXXXXXXXX  TAMSYDF +DDTTPAPV EGLQPSPTGAPRTDPAA PTSTTE XXXXXXXXXXXXXXXXXXXXXXXX                       EPISQPSERGAVAPT+ GTTPAPSTPG SWTQAPATAGA PP SGDVFTCPPPVPCICEAPA P PTAAPTS+ATSV AAAGV    AAMPTA+HPG PTSNTPSP HDGSLPMATPSX       N T PTMPGGSDSSTDEFEDDDDGLFYLPED DS+DGFQXXXXXXXXPDGEFDEP ATPAPRATP PVAGRSQPHTPMP VVADE+ EEVDCVSLLSPEMSTELAQKDKGVYYEKDCQGLHCNMFGIGWDCRACYMDCAACEGDQEDLGTADLAMCPSEFPRIGGQTQTCIS CSA RKTRYRRR   LRGQ
Sbjct: 1631 AAPTSTTKPPVAAPTXXXXXXXXXXXVAPSMPSXXXXXXXXXXXXXXXXXXXPMSYDFGFDGPTPAPVIEGVQPVATPGMPXXXXXXXXXXXXXXXXXAAETTTAPASSDRQQSPYSPSPSPXXXXVVAPXXXXXXXXXXXXXXXXXXXSHDXXXTATLAPAGGQNQAPSPTGVPPAMPSSPTS-----------------MSYDFGFDGPTPAPASEGLQPVATPGQPSPPTPSTXXXSRSPTAPVEETTTTAPVSSDKRQSSSXXXXXXXXXXVVAPAPISTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAP------------------------------------------------------------------------------------ATPPVPSPTMXXXXXXXXXXAPTAMSYDFKIDDTTPAPVYEGLQPSPTGAPRTDPAAAPTSTTESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALTSTPPTGAVQEPAATPEPISQPSERGAVAPTTAGTTPAPSTPGGSWTQAPATAGALPPVSGDVFTCPPPVPCICEAPAEPTPTAAPTSDATSVAAAAGVTTAPAAMPTASHPGMPTSNTPSPTHDGSLPMATPSXXXXXXXXNHTAPTMPGGSDSSTDEFEDDDDGLFYLPEDFDSIDGFQXXXXXXXXPDGEFDEPGATPAPRATPAPVAGRSQPHTPMPAVVADEEVEEVDCVSLLSPEMSTELAQKDKGVYYEKDCQGLHCNMFGIGWDCRACYMDCAACEGDQEDLGTADLAMCPSEFPRIGGQTQTCISTCSATRKTRYRRR---LRGQ 2361          
BLAST of mRNA_E-siliculosus-1a_M_contig9.17096.1 vs. uniprot
Match: A0A6H5KK76_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK76_9PHAE)

HSP 1 Score: 569 bits (1467), Expect = 6.720e-161
Identity = 543/948 (57.28%), Postives = 563/948 (59.39%), Query Frame = 0
Query: 1491 VTEGLQPVATPGQSLPSAPSMPPSSRSPTAPVEETTTAPASSGRHQSPSPA-------VAPXXISTTPDASPSLXXXXXXSSPSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAPTSTTKP---PVAAPTXXXXXXXXXXXXXPSMPSAXXXXXXXXXXXXXXXXXTSMSYDFDFDGPTPAPVMEGVQPVTTPGMPSPXXXXTXXXSPXXXXXXAETTTAPASSDRQR-------------------SPSSPSLSPXXXPVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAPAGGKNQAPYPTDAPR---------TLXXXXXXXXXXXXXXXXXXXXXXXMXYXXXXXXXXXXXXXXXLQXXXXXXXXXXXXXXTPPSSRSPTAPVEETTTXXXVSSDRRQSPSSPSPSPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDAXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATPPVPSPTMXXXXXXXXXXXXTAMSYDFNLDDTTPAPVSEGLQPSPTGAPRTDPAAVPTSTTEXXXXXXXXXXXXXXXXXXXXXXXXX--------------EPISQPSERGAVAPTSVGTTPAPSTPGASWTQAPATAGAPPPASGDVFTCPPPVPCICEAPAAPPPTAAPTSEATSVTAAAGVXXXXAAMPTAAHPGTPTSNTPSPAHDGSLPMATPSXTPTPTPHNQTTPTMPGGSDSSTDEFEDDDDGLFYLPEDSDSMDGFQXXXXXXXXPDGEFDEPSATPAPRATPVPVAGRSQPHTPMPVVVADEDEEEVDCVSLLSPEMSTELAQKDKGVYYEKDCQGLHCNMFGIGWDCRACYMDCAACEGDQEDLGT 2386
            V EG+QP ATPG   PS PS PPSSRSPTAP  ETTTAP+SS R              VAP  IST P+     XXXXXX   S +                                                          AP+ T  P   P AAPT    XXXXXXXXX      XXXXXXXXX        T+MSY+FDFD  TPAPV EG QPV TPG P PXXXX XXX  XXXXX AETT APASSD Q+                   +    SLSP   P  +                             LAP+G KNQ P PT APR         T+              XXXXX    M Y        XXX    LQ              TPPSSRSPTAPVEETTT   VSSDR++SPSSPSPSPV A XXXXXXXXXXXXXXXXXX                    T A     XXXXXXXXXXXXXXXXX                                                         ATPPVPSPT+XXXXXXXXXXXXTAMSYDFN DDTTPAPVSEGLQPSP GAPR DPAA PTSTTE XXXXXXXXXXXXXXXXXXXXXXXX              EPISQPSERG+VAPTS GTTPAPSTPG SWTQ PA AGAPPPASGDVFTCPPPVPCICEAPA P PTAAPTSEATSVT AAGV    AAMPTA+HPGTPTSNTPSP  DGSLPMATP X      H+QT PTMPGGSDSSTDEFEDDDDGLFYLPED DS+DGFQXXXXXX  PDGEFDEP ATPAPRA P PVAGRSQP+TP P VVADEDEEEVDCVSLLSPEM  ELAQKDKGVYYEKDCQGLHCNMFGIGWDCRACYMDCAACEGDQEDLGT
Sbjct: 2836 VMEGVQPDATPGMLSPSDPSTPPSSRSPTAPAVETTTAPSSSDRQXXXXXXXXXXXXMVAPAPISTAPEXXXXXXXXXXXXHDSSTAATLAPAGGKNQ----------------------------------------------APSPTDAPQTLPAAAPTPTSEXXXXXXXXXXXXXXXXXXXXXXXXSSTIPTAPTAMSYNFDFDELTPAPVSEGAQPVATPGQPLPXXXXXXXXXXXXXXXVAETTAAPASSDTQQXXXXXXXXXXXXXXXXXXSTAPDVSLSPAARPAPSHDPSPTAT---------------------LAPSGVKNQVPSPTSAPRADPAAAPTSTIELPAAAPAMPSVPSXXXXXAPTSMSYDFDFDGPTXXXASEGLQPVATPGQPSPPIPSTPPSSRSPTAPVEETTTTAPVSSDRQRSPSSPSPSPVVAPXXXXXXXXXXXXXXXXXXAP------------------TAAAATPTXXXXXXXXXXXXXXXXX---------------------------------------------------------ATPPVPSPTIXXXXXXXXXXXXTAMSYDFNFDDTTPAPVSEGLQPSPMGAPRADPAAAPTSTTEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGQEPAATPEPISQPSERGSVAPTSAGTTPAPSTPGGSWTQVPAAAGAPPPASGDVFTCPPPVPCICEAPAEPTPTAAPTSEATSVTVAAGVTTAPAAMPTASHPGTPTSNTPSPTQDGSLPMATPXXXXXXXXHSQTAPTMPGGSDSSTDEFEDDDDGLFYLPEDPDSIDGFQXXXXXXYFPDGEFDEPDATPAPRAIPAPVAGRSQPYTPTPAVVADEDEEEVDCVSLLSPEMLMELAQKDKGVYYEKDCQGLHCNMFGIGWDCRACYMDCAACEGDQEDLGT 3641          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig9.17096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G4L9_ECTSI3.780e-19268.26Cellulosome anchoring protein, cohesin region n=1 ... [more]
A0A6H5KK76_9PHAE6.720e-16157.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..2428
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..32
score: 6.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.764

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig9contigE-siliculosus-1a_M_contig9:2010349..2025151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig9.17096.1mRNA_E-siliculosus-1a_M_contig9.17096.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig9 2010349..2025151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig9.17096.1 ID=prot_E-siliculosus-1a_M_contig9.17096.1|Name=mRNA_E-siliculosus-1a_M_contig9.17096.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=2429bp
MRGSRGTRLAWLALLAQKAHAAPSSSSVSVACSLESLSQDDRESMRQHRR
GLFIDPDCGKSGRLGAGEGEERLQHVQPRDQLPQLLQHLRRCTGLRLRVP
PYVLSTAVAVADAEIAFCPGSGINSIDDCVNSEGQRALTNNGEGLGGDAF
DPMYGWEPTPAPTSVSYHFDFDEPTPAPVMVMETPQPVDARRPRPHHPEG
TPVPTSLSFDFDPDYPTPAPVTDGPQPPVDGRRPWPRHPDSTPAPTYLSF
DFDPDYPTPAPVMDGPQPVDGRRPRPRHPEVTPVPTYLSFDFDFDEPTPA
PVAEGPQPVDGRRPRHPQGTPVPTYLSFDFDFDYPTPAPVTDGPQPVDGR
RPRPRHPEGTPVPTYLSFDFDPDFPTPAPVMEGPQPVDGHRPRHPEATPA
PTYLSFDFDPNYPTPAPVTDGPQPFDGGRPRPRHPEVTPVPTYLSFDFDF
DEPTPAPVMDGPQPVDGRRPRPRHPEVTPVPTYLSFDFDFDYPTPAPVME
GPQPVDGRRPRPRHPQGTPVPTYLSFDFDFDYPTPTPVTDGPQPVDGRRP
RPRHPEVTPVPTYLSFDFDPDYPTPAPVMDGTQPVDGRRPRHPEVTPVPT
YLSFDFDFDEPTPAPVTEGPQPVDGRRPRPRHPQGTPVPTYLSFDFDFDY
LTPAPVTDGPQPVDGRRPWPRHPEVTPVPTYLSFDFDPDFPTPAPVMEGP
QPVDGRRPRHPQGTPVPTYLSFDFDFDYLTPAPVTDGPQPVDGRRPRPRH
PEGTPVPTYLSFDFDYPTPAPVMDGPQPVDGRRPWPRHPDSTPAPTYLSF
DFDPDYPTPAPVMDGPQPVDGRRPRPRHPEGTPVPTYLSFDFDFDYPTPA
PVTDGPQPVDGRRPRPRHPEGTPVPTYLSFDFDPDFPTPAPVMEGPQPVD
GHRPRHPEATPAPTYLSFDFDPNYPTPAPVTDGPQPFDGGRPRPRHPEVT
PVPTYLSFDFDFDYPTPAPVMEGPQPVDGRRPRPRHPQGTPVPTYLSFDF
DFDYPTPTPVTDGPQPVDGRRPRPRHPQETPVPTYLSFDFDPDYPTPAPP
TPAPVEDGPQPVDGRRPRPRHPEGTPVPTYLSFDFDPNYPTSAPVTDGPQ
PVDGRRPRPRHPDSTPASTSLPFDFDPDYPTPAPVTDGPKPVDGRRPRPR
HPEGTPVPTYLSFDFDPDFPTPAPVEEGPQPVDGRRPRPRHPEVTPVPTY
LSFDFDFDEPTPAPVEEGPQPVDGRRPRPRHPEETPVPTYLSFDFDFDEP
TPAPVMDGPQPVDGRRPRPRHPEGTPVPTYLSFDFDPDFPTPAPVMEGPQ
PVDGHRPRHPEATPVPTYLSFDFDPDFPTPAPVTEGPKPVDGRRPRLRHP
DSTPAPTSLPYHFDPDYPTPAPVTESPQPVDGRRPRPRHPEGTTEPTYLS
FDFDPDYPTPAPVAEGPQPVDGRRPRPRHPEGTPVPTYVSFDFDPDYPTP
APVEEGPQPVDGRRPRPRHPEGTPVPTSLSFDFDRPTPEPVTEGLQPVAT
PGQSLPSAPSMPPSSRSPTAPVEETTTAPASSGRHQSPSPAVAPSPISTT
PDASPSLATLPSPSSPSPSPSPVVAPAPISTAPDASPSPATVPAPSLDPS
TAATLAPAGGKNQAPSPTDAPLTDPAAAPTSTTKPPVAAPTAAAPTAAAP
TAVAPSMPSAPSPNMPSAPSPNMPSAPTSMSYDFDFDGPTPAPVMEGVQP
VTTPGMPSPPSPSTPPSSPSPTAPAAETTTAPASSDRQRSPSSPSLSPSP
SPVVTPAPISTAPDASPSPAARPAPSHDPSPAATLAPAGGKNQAPYPTDA
PRTLPPPAVAPAMPSAPSPAMPSAPTSMSYEFDFDGPTPAPVSESLQPVA
TPGQPSPPTPSTPPSSRSPTAPVEETTTTAPVSSDRRQSPSSPSPSPVAA
PAPISTAPDASPSPAALPAPTAAAPTAADAPTAADSPTATDAPTAADAPT
AADSPTATDAPTAADAPTAADSPTATDAPTAADAPTAADSPTATDAPTAA
DAPTAADAPTAVAPPTAAAAPATPPVPSPTMPSAPSPIMPSAPTAMSYDF
NLDDTTPAPVSEGLQPSPTGAPRTDPAAVPTSTTEPPAAAPTAPMSTPPT
GAGQEPAATPEPISQPSERGAVAPTSVGTTPAPSTPGASWTQAPATAGAP
PPASGDVFTCPPPVPCICEAPAAPPPTAAPTSEATSVTAAAGVTTAPAAM
PTAAHPGTPTSNTPSPAHDGSLPMATPSPTPTPTPHNQTTPTMPGGSDSS
TDEFEDDDDGLFYLPEDSDSMDGFQDDDNFFYFPDGEFDEPSATPAPRAT
PVPVAGRSQPHTPMPVVVADEDEEEVDCVSLLSPEMSTELAQKDKGVYYE
KDCQGLHCNMFGIGWDCRACYMDCAACEGDQEDLGTADLAMCPSEFPRIG
GQTQTCISACSAMRKTRYRRRRRRLRGQ*
back to top