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Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: D7G280_ECTSI (TAFII55_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G280_ECTSI) HSP 1 Score: 540 bits (1391), Expect = 2.720e-186 Identity = 349/356 (98.03%), Postives = 350/356 (98.31%), Query Frame = 2
Query: 464 MSTTYRQLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGGDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLEVTGTTEKPEAGAXXXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVVTLPSVGVPAAMPSLGEGVGLDPDDASAVMEDMNDAEDVLGVEDIFLGM 1531
MSTTYRQLVLRLPDGLKE MRERVAAD GMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EVGGDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLE+TGTTEKPEAGA XXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVV PSVGVPAAMPSLGEGVGLDPDDASAVMEDMNDAEDVLGVEDIFLGM
Sbjct: 1 MSTTYRQLVLRLPDGLKEAMRERVAADTGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EVGGDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLEITGTTEKPEAGAAXXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVVMFPSVGVPAAMPSLGEGVGLDPDDASAVMEDMNDAEDVLGVEDIFLGM 355
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A835YLK6_9STRA (TAFII55 protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK6_9STRA) HSP 1 Score: 189 bits (481), Expect = 3.840e-51 Identity = 119/307 (38.76%), Postives = 158/307 (51.47%), Query Frame = 2
Query: 476 YRQLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGGDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLEVTGTTEKPEAGAXXXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVVTLP 1396
YRQL+LR+PD LK +RERV A + +DF + + ++ FT+DG++YPARLV++PC LET KT D ++KS D+GQMLIVY+DE+A+ D +AS +GP + Y DG+TPPT+NIVRR+FVKARP GKF +A+V+ VESQ+ + + VT HEEIV FEPWM DP A GR+ G+TL++TG++ E A EG LFG E+L HPE LLA LP
Sbjct: 9 YRQLILRVPDKLKGRVRERVQAGQS-DNMDFVQDGENPLKYVFTIDGERYPARLVNLPCNLETLKTTDNTMYYKSADIGQMLIVYEDEDAFNADAEDAS-IGPAQYYADGITPPTRNIVRRKFVKARPVLGKFPKAQVMTVESQLEML---------------------------------------------------------------------INATAAEPVTEVHEEIVDFEPWMLDPSAAITGRVAGVTLQITGSSNVTEMRAAG--------EGGA---LFGHEVLAYHPEALLARGELP 233
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A7S2RHU4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHU4_9STRA) HSP 1 Score: 103 bits (256), Expect = 1.400e-20 Identity = 62/163 (38.04%), Postives = 93/163 (57.06%), Query Frame = 2
Query: 479 RQLVLR-LPDGLKETMRERVAADAGMEGVDF---------TPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPE 937
RQ++LR LP+ L E +RE++ + + V F T + S++ F + YP LV++PC +E+ KT D+ T FKS D+GQMLIV+++E +K + GV QR + GLTPPT + RRRF + + + F R EV VE ++LK+ PE
Sbjct: 14 RQVILRILPESLLEAIREKLV-EGSLSDVQFFFEDPPALSTLQVSPSQKMVFQLGDMIYPGLLVNLPCPVESHKTFDRITTFKSADIGQMLIVFENEGEREKAE-KECGV-EQRFFHSGLTPPTSYVTRRRFAQTKSELRSFTRKEVSEVEDELLKLMSSTPE 173
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A397DDH0_9STRA (TAFII55_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DDH0_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 8.260e-18 Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 2
Query: 482 QLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLY------PDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKM 919
Q +LR+P + E +R+++A + + GVD +R F F +D + PA L +PC++ET KT D++ F+KSGD+GQ+L+V+ Q LY P G+TPPT NIV+R++ K R F +A+V RVE ++K+
Sbjct: 4 QYLLRVPKRVGEELRKKMA-EKEVRGVDVVAGAD-NRNFKFRIDDTELPATLCQLPCIVETHKTYDEKLFYKSGDIGQILLVHDTPEE-------------QMLYETVTELPGGITPPTTNIVKRKYAKTRKS-PIFPKADVARVEDTLVKI 139
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A2V3IJD7_9FLOR (Transcription initiation factor TFIID subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJD7_9FLOR) HSP 1 Score: 94.7 bits (234), Expect = 2.610e-17 Identity = 57/151 (37.75%), Postives = 80/151 (52.98%), Query Frame = 2
Query: 479 RQLVLRLPDGLKETMRERVAADAGMEGVD-------FTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQV 910
+Q +LRLP L E MR ++++ EG F + K R FT+DGK YPA L+D+PC++ET KT DKRTF+KSGD+ Q+L+V + K PDG+TP TK +R +P F R EV +E ++
Sbjct: 4 QQFILRLPQPLVEPMRFALSSNKKREGAGDDRQASKFEIDFKDERNAIFTIDGKHYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDEPVPK----------HTQLPDGITPATKGAAKR----MKPPERFFTRDEVELIERRI 140
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A8J2T034_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T034_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 7.680e-17 Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 2
Query: 521 MRERVAADAGMEGVDFTPEKKGSRR--------FTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNAS---GVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVL 913
+ ++VA D EGV+FTPE S + F +D PARLV++P ++ET KT D+ T+ K GDVGQ+L+V+KDE++ +D + G ++PDGLTPP ++++RRRF KAR K E +R +L
Sbjct: 67 LEQKVAKDK-TEGVEFTPEGDTSVKQDDFHSLDFRCKIDDLDLPARLVNLPTIVETHKTWDRETYVKCGDVGQILLVFKDESSRTQDKARQAAHAGSAWSLVHPDGLTPPLQDVIRRRFSKARKRSRKDVTVEEVRRAEDLL 207
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A1V9ZGC5_9STRA (TAFII55_N domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGC5_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.640e-16 Identity = 55/160 (34.38%), Postives = 88/160 (55.00%), Query Frame = 2
Query: 482 QLVLRLPDGLKETMRERVAADAGMEGVDFTP------------EKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKAR--PDRGKFDRAEVIRVESQVLKM 919
Q +LR+P + +R+++ + + GVD + ++ F F +DG++YP L +PC++ET KT D F+KSG++GQ+ +V+ EN KK G P GLTPPT NIV+R++ K + PD F +A+V RVE ++K+
Sbjct: 3 QYLLRVPRKIGNELRKKIQ-EKDINGVDLVAGGMSIRVYESNDDVADNKYFKFHIDGQEYPVTLNQLPCIMETHKTYDDNLFYKSGEIGQIFMVH--ENFEKK-----KGYEDVTELPSGLTPPTTNIVKRKYAKTKKYPD---FPKADVARVEDGLIKI 151
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A7S3JUW2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUW2_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 1.870e-16 Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 2
Query: 464 MSTTYR-QLVLRL--PDGLKETMRERVAADAGMEGVDFTPEKKG-----SRRFTFTMDGKKYPARLVDMPCVLETQKTLDK-RTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKF--DRAEVIRVESQVLKM 919
MSTT + QL+L PD L + AA+ G E E++ SRR + G YP RLV++P ++ET KT D + +K GDVGQ++IVY++E A + D+G Q +Y DG++PP KN V RRF KAR R K + E+ VE+++ +
Sbjct: 1 MSTTVQTQLLLHAESPDVLAKLSELVDAAEGGGELEIVAEEREANENESSRRMKLVIMGHTYPTRLVNLPTLVETHKTFDNGKNVYKCGDVGQVVIVYQNEAARRADEGRTIHKAWQHVYQDGISPPLKNCVERRFAKARRRRAKVQANARELHAVEARIASL 163
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: W4GBL9_9STRA (TAFII55_N domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBL9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 4.410e-16 Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 2
Query: 482 QLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLY------PDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKM 919
Q +LR+P + E +R+++A + + GVD +R F F +D + PA L +PC++ET KT D++ F+KSGD+GQ+L+V+ Q LY P G+TPPT NIV+R++ K R F +A+V RVE ++K+
Sbjct: 4 QYLLRVPKRVGEELRKKMA-EKEVRGVDVVAGAD-NRNFKFRIDDTELPATLCQLPCIVETHKTYDEKLFYKSGDIGQILLVHDTPEE-------------QMLYETVTELPGGITPPTTNIVKRKYAKTRKS-PIFPKADVARVEDTLVKI 139
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A024UIK8_9STRA (TAFII55_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UIK8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 7.580e-16 Identity = 53/152 (34.87%), Postives = 85/152 (55.92%), Query Frame = 2
Query: 482 QLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLY------PDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKM 919
Q +LR+P + +R+++A + + GVD +R F F +D + PA L +PC++ET KT D++ F+KSGD+GQ+L+V+ Q LY P G+TPPT NIV+R++ K R + F + +V RVE ++K+
Sbjct: 4 QYLLRVPKKVAVDLRKKMA-EKEVRGVDVVAGAD-NRNFKFRIDDTELPATLCQLPCIVETHKTYDEKLFYKSGDIGQILLVHDTPEE-------------QMLYETVTELPGGITPPTTNIVKRKYAKTRKN-PIFPKNDVARVEDMLVKI 139
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Start | 1 |
| Stop | 1 |
| Cds size | 1071 |
| Model size | 2009 |
| Exons | 8 |
| Ec32 ortholog | Ec-16_002140.1 |
| Ec32 ortholog description | TAFII55 protein, conserved region |
| Hectar predicted targeting category | other localisation |
| BRITE | ko00000,ko00001,ko00536,ko03021,ko03036 |
| Best eggNOG OG | NA|NA|NA |
| Best tax level | Eukaryota |
| COG Functional cat. | K |
| EggNOG OGs | COG5414@1,KOG4011@2759 |
| EggNOG free text desc. | chromosome segregation |
| GOs | GO:0000003,GO:0000122,GO:0000123,GO:0000296,GO:0000428,GO:0001067,GO:0001932,GO:0001933,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0003712,GO:0003713,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005669,GO:0005737,GO:0005794,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006357,GO:0006366,GO:0006367,GO:0006469,GO:0006725,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006928,GO:0007154,GO:0007165,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0008134,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009987,GO:0010033,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0010646,GO:0012505,GO:0014070,GO:0015696,GO:0015846,GO:0015893,GO:0016043,GO:0016070,GO:0016591,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019899,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0030154,GO:0030234,GO:0030317,GO:0030518,GO:0030520,GO:0030522,GO:0030880,GO:0031056,GO:0031057,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032870,GO:0032991,GO:0033043,GO:0033044,GO:0033276,GO:0033673,GO:0033993,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0035034,GO:0035035,GO:0035065,GO:0035067,GO:0035097,GO:0035257,GO:0040011,GO:0042221,GO:0042325,GO:0042326,GO:0042493,GO:0042809,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043254,GO:0043401,GO:0043549,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0044703,GO:0044798,GO:0045859,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0046966,GO:0046982,GO:0046983,GO:0048232,GO:0048468,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048583,GO:0048609,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051123,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051338,GO:0051348,GO:0051427,GO:0051674,GO:0051704,GO:0051716,GO:0055029,GO:0060255,GO:0060260,GO:0061695,GO:0065003,GO:0065004,GO:0065007,GO:0065009,GO:0070013,GO:0070461,GO:0070887,GO:0070897,GO:0071310,GO:0071339,GO:0071383,GO:0071396,GO:0071407,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0090575,GO:0097159,GO:0097659,GO:0097722,GO:0098772,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1901983,GO:1901984,GO:1902275,GO:1902493,GO:1902494,GO:1902531,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1905268,GO:1990234,GO:2000112,GO:2000113,GO:2000142,GO:2000756,GO:2000757,GO:2001141,GO:2001251 |
| KEGG Pathway | ko03022,ko04974,map03022,map04974 |
| KEGG ko | ko:K03132,ko:K19721 |
| Preferred name | TAF7 |
| Seed eggNOG ortholog | 2880.D7G280 |
| Seed ortholog evalue | 2.5e-152 |
| Seed ortholog score | 545.0 |
| Taxonomic scope | Eukaryota |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig88.16794.1 >prot_E-siliculosus-1a_M_contig88.16794.1 ID=prot_E-siliculosus-1a_M_contig88.16794.1|Name=mRNA_E-siliculosus-1a_M_contig88.16794.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=357bp
MSTTYRQLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMD
GKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDG
NASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVL
KMQQDVPEGPDRSRKAGSSGGGGITAGGGMSGSSSRGGSADASGGGSSSS
RSRTSRSSGGGGGSSGGGGGGGGEVGGDGVTFEHEEIVPFEPWMADPKFA
ALGRLEGITLEVTGTTEKPEAGAAGAAGGAGGGEGSTAPRLFGSELLYEH
PEILLAVVTLPSVGVPAAMPSLGEGVGLDPDDASAVMEDMNDAEDVLGVE
DIFLGM* back to topmRNA from alignment at E-siliculosus-1a_M_contig88:44079..51706+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E-siliculosus-1a_M_contig88.16794.1 ID=mRNA_E-siliculosus-1a_M_contig88.16794.1|Name=mRNA_E-siliculosus-1a_M_contig88.16794.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=7628bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:44079..51706+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GCTCTGACGATCACGACCGACATCAGCCACACCACATGGTAGAAGAAAGA
GGCAGGTTGTTCTTCCGGAAGAGAAAACACGAGGAGGGGGCGAGGGATCA
AAGGTGCCACACAACACTAGCAGCATTCCCTGTAGAAAGAATCAGACTTT
GGTGCAGGATAAGCGGATTGGCGGGGGTGCAACACAGCAACCCGATAACA
GTCCCGCGGACCCGCGGATTAACGGCGAACCCGCCGATTCTACTGCTACA
GGCCGTGGCGGAAATAGAGACCGACACACGTGTAGACTTATTAGGCACCC
CTTCTCTTCGCGTAGGGCAGCTATTGTTACTTTTCCAATACTACACGCCG
ACCCTTCGAGATGCGGCGGGACGTTGACTAGACTACTGATTGTGGGGAAG
GAAAGCGCAGCCCGTCGTGTTGACAAGCGCTACTGCTCCCGTCTCCCAAA
GTGACGCTCGTTTTATATCGCCATGCCCTCCGTGCCACAGCTAAGCCTGC
ACCGTATCCACCGAGCAGACAAGGGCGCACACACAACTACAGCGGCACTA
TGTAATCGACCAGCCTAGACTGCTGTGCATCTTGTGCGGCGTGTTTTGGC
ACCTTGGCTCCGTTGCAAGCGCGTGCCGGTGACAGCTTCTGCCTCAGTGA
GCATGCCACCCTGCCGGCCACGATAGCACAATATCATGGCTTGAAAGCGA
AGACGGCCGACATATTTGTCGGTCTCACAGCACTTTCGAACAACCTCCAA
CAGATATGTTCCCGCTGCCTCCTTCCCCGCGCTCATCCTTCAACCCCCCT
GTCTCCAACAACACTCACTTGCCGCTGCCCCTTTCCCGCGCTCATCTTCC
ACCCCCCGTGTCTCCAACAGCGCGTCGGGTGGCCGGTCCCCCAGGTTGTC
GTAATTTCCACTCCTTCCGGCTCCTCGACTCTGGAGAGGGTTAGGTCCTG
AGCCTGCTACGGAACGGAATCCACCACAACCACAAAACTTGCACCCCTGC
GCAGGACGGCGAGCATCCCCTGTCACGTGCGAAGCAGCAGCCCGACCACG
GACGGTGCTGTTGTTTTGGGGGTCTACATAAGGCGAACCGGTGCTGTTGT
ATTCGGCGTCTACGTCAAACGGACCTGTGCTGTCGTTTGGGCACTACTTA
AGACGGACCGGTGCTGTCGTTTGGGCGTCTACGTTAGACGGACCGGTGCT
GCCGTTTTTGGGCGTCATACCTACCGCACAATGTCAACGACGTACCGCCA
GCTGGTGCTGCGCCTACCGGACGGCCTGAAGGAGACGATGAGAGAAAGGG
TGGCGGCGGACGCGGGGATGGAAGGGGTCGACTTCACGCCGGAGAAGAAA
GGGAGCAGAAGGTGAGGCGAGGGGGGGCTGTATAGGCCCGCAGGTTGTTT
CCAACGGACGGCCCCACGGCAGGGTATGAGAGGGAACATAGGGCGGGACA
GGGCAGGGAGGGGTGTACTCATAGCCGTGCATGCCGTCGTCGTTAGACCA
TTGGCCTCGCAGCAGGGATGGAGCACGCCGGGTTCTCACCGGACCAGGCT
CTGACAGGGAGGGCGTGGAAGAAAGCGGGTGTTCACCTTTTGCTTCCTCG
CGTTTGTCGTGCTGTTGGTGGAGCTCCAGCCGACGCCATTTCAGCCAAAC
AACAACTGCTGTGACAGCTTCAATGCATGCTATTTGATGATGCGGTAGTT
TATTTTAGCGCGGGCGGTCTGTTTGCCCACTCTGTACAACAACAAGAGTA
TTTTGGACTTTATACACGCATCCGAAGGGTAATTAATCCAGTCGAGCGTC
GTGGTGACCGTTTCGACAGGTTCACGTTCACCATGGATGGGAAGAAGTAC
CCCGCCCGCTTGGTGGACATGCCGTGCGTACTGGAAACCCAGAAGACTCT
GGACAAGAGGACCTTCTTCAAGAGCGGGGACGTCGGCCAGATGCTCATCG
TGTACAAGGTGTTGTCTCCCGTTTCTGGTTGGAGATCTCTCTGAGCCCTC
GCTGTTCACCGCTGTTGGTACGACCGTAAACTCGTGGTAGCACAAAGAAG
ACACGATGTATTGGGGTTGTTTTTGCACATGCTCAGAATGACTCGGGGAA
ATGTTTCCCGATCCCCCTCCGTTTATGACGCTACTCGCCGAACACCTCAC
GGCGCTCAACGCTTGGTGCAATCCCTCCCTGCCTGATCGCGAAACCACGA
CTAGCGATACATGTCCCTTAGATTTTCCTACGAGAGCCACAAGCGCCACC
AACAATGGGTTTGGCCCCCTCCCCCCCCTCCACATTTCAGTATCCCCCCC
CTCACCCCTCTGTAATGGTATTTGACCCCTTCCTTCAGAATCAATCACCT
TAGAGCTGTGTGGAACTCTCTTGTCCGACCATAGTAGCAGGTTGTTGTTG
CTTTCCGTCGTTCTCTTTCTCTTGATTAACGCTTTCCAAGCCAACTCACA
ATATCCCTTTCACACACGATCATAGATCGTCTGCACGCACACACTGAACA
GAAGGGCACATGTCTCGGCATAAAGCCCTGATCTAGCATGACGTCACGCC
TTAGCATCCGACGGCGCCAAATAACCATGATCAACCACAATCACATGTCT
ACCTCCAAATACCAAAGCACCTCAGGCACAGTTTTTTAGTATCCCCCCCG
TCCTCTCTCGCGTTGATTTTCCGTCCCCCCCCAGGACGAGAACGCCTACA
AGAAGGACGACGGGAACGCTTCCGGGGTCGGCCCGCAGCGCCTGTACCCG
GATGGCCTGACCCCTCCCACCAAGAACATCGTAAGGAGGCGTTTCGTCAA
GGCCCGGCCGGACAGGGGGAAGTTCGACCGAGCGGAGGTGCGAGCTGGGT
TAGTGTTGGTGACGATGACCACAATTATGATGATGATGATGATAGCGATT
TGGTATGTACGGTCGACCCCGCTTTAAGGACACCCATGTTTTTTTTTTTT
TCAAAGTGTCCTTGGCGCGGGAAAGCGTCCCTAAGGCCGGCACGCCCCCC
TCAATATTGTATATCTGGAGGGCACTCTGCTTTTGAGATTTTTTTGTCCT
TAAAGCTGGGAGTTGACTTGAGACGAGTGTCCTTAAAGCGGGGACGACTG
TAATAGCAACGAATGAGGCGCGCACCGTGAGACGCGATAATATCCCAAGG
GAAAGGAGACAGTGTTTTGCACTTGGTTCCCACACCACAGGAGGGAGTGT
GCATTGGCCTCGTGGAATAGCTCCTATCATGACATGAAGAGGTAGTGATT
GGCTGCGTGGGTTGGTGCGCGAGGGGAGACGGCGCGAGGTGCAGCGCCTC
GTGGTTGAGCCGCGTGGCGAGGAGACTGTGGGCCCGTTACACACGACAGT
ATAACTAGACGTTCCACACGAGAAGGGGCAGCACGGGGGAGGGTCGGCAG
GCGTCATTCCGTGATCGACACAAGCACCGGCAGCTCTGAGAGACCCCCAC
CGCGACCCTCCCCTGCTTTCCGACAAAACAGGTAATTCGGGTCGAAAGCC
AGGTACTGAAGATGCAGCAGGACGTCCCCGAAGGCCCCGACAGGAGCAGG
AAGGCAGGCTCTAGCGGAGGCGGCGGAATCACCGCGGGAGGGGGAATGTC
GGGGAGTTCTTCGCGAGGGGGCTCCGCGGACGCGAGCGGGGGGGGTAGCA
GCTCTTCGCGGAGTCGCACCTCGAGAAGTAGCGGGGGTGGTGGCGGCAGC
AGCGGTGGCGGCGGGGGAGGCGGTGGCGAAGTCGGCGGCGATGGCGTTAC
CTTCGAGCACGAAGAGATCGTCCCTTTCGAGCCGTGGATGGCCGACCCAA
AGTTCGCCGCTCTAGGGCGCCTGGAAGGCATCACGCTCGAGGTGCCCCGT
TTTTACGTGACGAAAAACGTTTTTTGCCGCCAGTCCGCTCGCCCGCCCCA
TTTTGTGTTGTCTGCGGCTCGTTGCTTTGAAATGACCAACTCTCGTTGCT
AGTCGAGGTGTCTTTTATGGAGCATTGTGGTTAAGCCGTAGTGAGGTGTC
TGCAGCGTCGTCCGCGCTTTGCCCTGTCCGGCGGTTTGTTCGGCCCCAGC
TACGGTCGAGAATTTTTTTCTCCAATGTTGTGTTGTGTTGTGTTGTGTTT
TCGCCTTCCTTTCATCATTGTCCCCGCTTTTTCATCGACGGTTTCTTGTT
CTTGTTTCCGCCGCCGCCTCTTCATCCCCACCTACATACCTGCCGACCGC
CTTTTCTACGTTGTTTGAGTCAACACACACGTACAGAGCACCAAAACGTT
AAACCGGTGTGGCCCTGTTAAAAAAAAATTGTATCGGGGGATTCTCCCTC
CTGATGTTTGTGTCAACAAAAGGGACGATCAATCAATACTCTAAGAACTC
TGGGGCGATCAAATGAAGATAACGCCTCAGTCGAGGTCGGCCAAATCACC
CCCCCCGGATGCAGCAACAGCAACCGAACGCTGCCCCCCGTCCCCATCCC
GCCAATTGTATCGACCCTCTCCCTCTTCGTCCTCTCGAGGACGCGTGGTC
AATGGTCTAACCGCTTATGCATGCTAAACATGAGTACCCCCACCGCCCGG
GTTGTTAGGTCACCGGAACGACGGAGAAGCCCGAGGCAGGCGCGGCCGGG
GCGGCCGGCGGCGCCGGCGGCGGAGAGGGGTCGACGGCACCGCGGCTCTT
CGGCTCCGAGCTTCTCTACGAGCACCCGGAGATTCTCCTCGCTGTGGTAC
GTGTGTTTGTGTGCACGAGAGGGGGGGGGGAAGCGGTGCATGCCATGCCC
GAGTTGAACGAGGCGTTTTCTTTGACCGGGTGTGTGTGTGTGTGTGATTA
GGATGAATCGGTTTCGCCAGAACAAAAAAGATGGAGACTGTATTTTTTCT
GCACGGGGATACGTATGTAGAGGAAATGTAGAGGCGCTGGCGAGATGGAA
GGTTGTGGTTCGAGGGCGGACGCGGAGCGGTACGAAAGACGTGGTAGCCG
TCCCCCACTTGTTTCGGCCGCAAGCAGGTTTTCTACCTTTCCTTGTTGGT
CGGGCGTTTCCAAGGCCGCTCGCTTCTTGTTGTCCGGAGAGGGGGTGACT
GAAGCAGTAGTATCCATGGCCACAGCAAGAACACCATACATGCCTGCATG
CCACTTTAGGTGGCACGACTCGTGCCCCGCCGGCGCTAACCTGCATGCCC
CCCCCCCCCCCCCTCCCTCCTCTTCCACCCCCCTCCCTCCTCTTCCACCC
CACAAACCGACTCGCGCGCTGCACGAACACCCCCCGAAACGGGGCGCGCG
CGTGGGGCGACTAATTGAACGCTCAAAATTGCGACGGCGACGACGTTACG
ATAATGATGGCAGAGTGATACCCCGGAGGACCCGACCTTACAGCCCCCCC
GTCCCGCGAAGCCGGCGACGCCGACAACGACGCCGGGGTCTTCGCCGGGG
GGGTCGGGGAAGAAGTCGTCGTCCGCGGCGGGGGGGGGGGCGAAAAAGAA
GCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGCAGAAGCAGAAGCAGA
AGCAGCAGGCTGCCCGGGGGGGGGGCAGCGCTGGAGGCGGGGGCGGGGGC
GGCAGAGGGCAGCAGCGGCAGCAGGTGCGGTTCGGTACGGTGCGATGCGG
TGCGACACTCGCTGTTCCATGATTCGCCGGGGCACCGGATGTTGGCCGAA
CACGGTTCAACGGCTACTACTACAATATGCTGCTAGGAAACAACAGTGAT
TTTTTTTAGCCATCCACGTTGTTGTTGCCGCGTTCAGACACCATGCGCCC
GGGCCGCCTCCCCCCCCCCGGTTCTTATATCCGTCGATTACGTTTGGCCA
CAAGCCCGAGTGTTGAGAGGGTGTGCCCTCCCCACTGTGGACCACGCCGC
CCCCGTTCTTGCAGTGGTTGGTGCGAAGTCAAGTGTCTGAGGCCATTGGG
AGGAGTAACCCTCCCCCCCTGTTGCATATCGCTCTGTCTCGGCATTGTAA
GGGTGCGAGGTCAAGAGTCTAATGACTATGGCATGCGTATGAATACACAC
ACCCCCTTTTGCCATTCCGCAACATGGTTCGCGTTGACCGTTGCCCACCC
CGGGGTCGCTGCTGTTGATCAGGTGACGCTTCCCAGCGTCGGGGTGCCGG
CTGCGATGCCTTCCCTGGGAGAGGGCGTCGGGCTAGACCCTGACGACGCT
TCGGCGGTGATGGAAGACATGAACGACGCCGAAGATGTGGTGGGTCAAGG
GTACTCCTACATGCGTGTGATAAGATAAGACGTCTGTTTTTGTTTCTCTG
TGTCTGTTGTGTTATTATAGCATCGATCGCGCTAACCGACTAACCAATGA
TAAAGACGCCAGTCTGGGCGTGTGTGTGTTCTTCTCCTCACAAGTACAAC
AAACCAAGATCATCTCTATCCATTGATGGAAAAAACGTTTTGTTTTTTCA
GAACGTCGTCGACTGCAGCAGGCCGTGTATGCCCCTCCCCTTGTAACTGT
AGCGAGAGCCCGGGGGTAGGGGGAGAGCATTTTGTCGACCTTCCACGCTT
GTCAGGAGGCAGACCCGGATGCAGTCTTTGTTTTTTTCTCGACCGGCGCA
TGCACCACGTGTACGTACGTGGCTGCAGGCATGATTGATTGTTGTCGTTG
TTGTTGCCTCTGTGTACCCAGTTGTCAAGCATTGCCGTCAACCGTCTTGA
CCGTCTACAATGCCGTCGGCTAATTTCGAAATTACCTGGCACGGATCGTC
AAGATGAAGACAAGGCAGGACTCTATTTGATGGCACGGATTGGTTGAATA
ATCCCTGACCGCATGGATGAGCACTACAAGGCAGAGCCAGCCCACTCACT
TGCTTGTTGAGCGCTTGTTTGATTTGGTTCATGCTTCAAGCCCACGCCCC
GTTTCTGGCGGAAATGCGGTCACAACAGCCGACCGTTCTAAATACTTGCG
TTTTTGTTGAGCAGCCCCCCCGCGGCAGTGCACGCACCGTCTCCCCCCTC
CGTCCGCCGGCAATTCACTCGATCTTACGCTTCGTGCCGTCTGCCTGTCT
TCTCGACGGTGCCCTTCTGCTGCTGCTACCCTGCTTGGCGGGAAAACGAA
AACTCCTGGAAATTTTCTTTGGCTGGTGCGTGTGTATCTGGTGATTGCTG
GGGAAAAAAAACGGCGTCAGCTGGGAGTCGAAGACATTTTCTTGGGCATG
TAGGGGAGCGAGCGAGCGGGGGAGTCTGGAGCATCGATTCTGCTGCCACC
GCTGTGTGGTAGTGTGGGCCGATTGAGCCGAGCTGACGACGGACGTTCTG
CGGTCTACCTTTGACAACGGCGGTCGCCACCTTGAAGCCAATTCGTTGCT
GGCTTAATTGACGTCGCACATCAAGAGTAACACATCGTCTCAGAGGGGCT
CTTTGTGCATCGGCGCTCGCGCGTGCACGATCGGGTGAATGCGTGTGTTT
TTATTACTACTGTAGCATCGACCGCGCTAACCGGCTGACCAGTGGAAAGA
CTTCAGTCTCAGTGCGGTTGAAAACGCGCAACACTTCTAAACGCCATTAA
CTGGGACCCCGTGAGTTGAACGTGTGTGTTTGTGTGTGTTTTTGTCATTT
AGCATCGACCGCGCTAACCGGCTGACCAATGAAAAGTTTGTGCGTGTTTT
TTTTTTAATTGGCATCGACCGCGCTAAC back to topCoding sequence (CDS) from alignment at E-siliculosus-1a_M_contig88:44079..51706+ >mRNA_E-siliculosus-1a_M_contig88.16794.1 ID=mRNA_E-siliculosus-1a_M_contig88.16794.1|Name=mRNA_E-siliculosus-1a_M_contig88.16794.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2142bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig88:44079..51706+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGTCAACGACGTACCGCCAGCTGGTGCTGCGCCTACCGGACGGCCTGAA
GGAGACGATGAGAGAAAGGGTGGCGGCGGACGCGGGGATGGAAGGGGTCG
ACTTCACGCCGGAGAAGAAAGGGAGCAGAAGATGTCAACGACGTACCGCC
AGCTGGTGCTGCGCCTACCGGACGGCCTGAAGGAGACGATGAGAGAAAGG
GTGGCGGCGGACGCGGGGATGGAAGGGGTCGACTTCACGCCGGAGAAGAA
AGGGAGCAGAAGGTTCACGTTCACCATGGATGGGAAGAAGTACCCCGCCC
GCTTGGTGGACATGCCGTGCGTACTGGAAACCCAGAAGACTCTGGACAAG
AGGACCTTCTTCAAGAGCGGGGACGTCGGCCAGATGCTCATCGTGTACAA
GGTTCACGTTCACCATGGATGGGAAGAAGTACCCCGCCCGCTTGGTGGAC
ATGCCGTGCGTACTGGAAACCCAGAAGACTCTGGACAAGAGGACCTTCTT
CAAGAGCGGGGACGTCGGCCAGATGCTCATCGTGTACAAGGACGAGAACG
CCTACAAGAAGGACGACGGGAACGCTTCCGGGGTCGGCCCGCAGCGCCTG
TACCCGGATGGCCTGACCCCTCCCACCAAGAACATCGTAAGGAGGCGTTT
CGTCAAGGCCCGGCCGGACAGGGGGAAGTTCGACCGAGCGGAGGACGAGA
ACGCCTACAAGAAGGACGACGGGAACGCTTCCGGGGTCGGCCCGCAGCGC
CTGTACCCGGATGGCCTGACCCCTCCCACCAAGAACATCGTAAGGAGGCG
TTTCGTCAAGGCCCGGCCGGACAGGGGGAAGTTCGACCGAGCGGAGGTAA
TTCGGGTCGAAAGCCAGGTACTGAAGATGCAGCAGGACGTCCCCGAAGGC
CCCGACAGGAGCAGGAAGGCAGGCTCTAGCGGAGGCGGCGGAATCACCGC
GGGAGGGGGAATGTCGGGGAGTTCTTCGCGAGGGGGCTCCGCGGACGCGA
GCGGGGGGGGTAGCAGCTCTTCGCGGAGTCGCACCTCGAGAAGTAGCGGG
GGTGGTGGCGGCAGCAGCGGTGGCGGCGGGGGAGGCGGTGGCGAAGTCGG
CGGCGATGGCGTTACCTTCGAGCACGAAGAGATCGTCCCTTTCGAGCCGT
GGATGGCCGACCCAAAGTTCGCCGCTCTAGGGCGCCTGGAAGGCATCACG
CTCGAGGTAATTCGGGTCGAAAGCCAGGTACTGAAGATGCAGCAGGACGT
CCCCGAAGGCCCCGACAGGAGCAGGAAGGCAGGCTCTAGCGGAGGCGGCG
GAATCACCGCGGGAGGGGGAATGTCGGGGAGTTCTTCGCGAGGGGGCTCC
GCGGACGCGAGCGGGGGGGGTAGCAGCTCTTCGCGGAGTCGCACCTCGAG
AAGTAGCGGGGGTGGTGGCGGCAGCAGCGGTGGCGGCGGGGGAGGCGGTG
GCGAAGTCGGCGGCGATGGCGTTACCTTCGAGCACGAAGAGATCGTCCCT
TTCGAGCCGTGGATGGCCGACCCAAAGTTCGCCGCTCTAGGGCGCCTGGA
AGGCATCACGCTCGAGGTCACCGGAACGACGGAGAAGCCCGAGGCAGGCG
CGGCCGGGGCGGCCGGCGGCGCCGGCGGCGGAGAGGGGTCGACGGCACCG
CGGCTCTTCGGCTCCGAGCTTCTCTACGAGCACCCGGAGATTCTCCTCGC
TGTGGTCACCGGAACGACGGAGAAGCCCGAGGCAGGCGCGGCCGGGGCGG
CCGGCGGCGCCGGCGGCGGAGAGGGGTCGACGGCACCGCGGCTCTTCGGC
TCCGAGCTTCTCTACGAGCACCCGGAGATTCTCCTCGCTGTGGTGACGCT
TCCCAGCGTCGGGGTGCCGGCTGCGATGCCTTCCCTGGGAGAGGGCGTCG
GGCTAGACCCTGACGACGCTTCGGCGGTGATGGAAGACATGAACGACGCC
GAAGATGTGGTGACGCTTCCCAGCGTCGGGGTGCCGGCTGCGATGCCTTC
CCTGGGAGAGGGCGTCGGGCTAGACCCTGACGACGCTTCGGCGGTGATGG
AAGACATGAACGACGCCGAAGATGTGCTGGGAGTCGAAGACATTTTCTTG
GGCATGTAGCTGGGAGTCGAAGACATTTTCTTGGGCATGTAG back to top
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