prot_E-siliculosus-1a_M_contig88.16794.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig88.16794.1
Unique Nameprot_E-siliculosus-1a_M_contig88.16794.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length357
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: D7G280_ECTSI (TAFII55_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G280_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 2.160e-191
Identity = 349/356 (98.03%), Postives = 350/356 (98.31%), Query Frame = 0
Query:    1 MSTTYRQLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGGDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLEVTGTTEKPEAGAXXXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVVTLPSVGVPAAMPSLGEGVGLDPDDASAVMEDMNDAEDVLGVEDIFLGM 356
            MSTTYRQLVLRLPDGLKE MRERVAAD GMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EVGGDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLE+TGTTEKPEAGA XXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVV  PSVGVPAAMPSLGEGVGLDPDDASAVMEDMNDAEDVLGVEDIFLGM
Sbjct:    1 MSTTYRQLVLRLPDGLKEAMRERVAADTGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-EVGGDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLEITGTTEKPEAGAAXXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVVMFPSVGVPAAMPSLGEGVGLDPDDASAVMEDMNDAEDVLGVEDIFLGM 355          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A835YLK6_9STRA (TAFII55 protein conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK6_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.700e-54
Identity = 119/307 (38.76%), Postives = 158/307 (51.47%), Query Frame = 0
Query:    5 YRQLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPEGPDRSRKAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVGGDGVTFEHEEIVPFEPWMADPKFAALGRLEGITLEVTGTTEKPEAGAXXXXXXXXXXEGSTAPRLFGSELLYEHPEILLAVVTLP 311
            YRQL+LR+PD LK  +RERV A    + +DF  + +   ++ FT+DG++YPARLV++PC LET KT D   ++KS D+GQMLIVY+DE+A+  D  +AS +GP + Y DG+TPPT+NIVRR+FVKARP  GKF +A+V+ VESQ+  +                                                                           + VT  HEEIV FEPWM DP  A  GR+ G+TL++TG++   E  A          EG     LFG E+L  HPE LLA   LP
Sbjct:    9 YRQLILRVPDKLKGRVRERVQAGQS-DNMDFVQDGENPLKYVFTIDGERYPARLVNLPCNLETLKTTDNTMYYKSADIGQMLIVYEDEDAFNADAEDAS-IGPAQYYADGITPPTRNIVRRKFVKARPVLGKFPKAQVMTVESQLEML---------------------------------------------------------------------INATAAEPVTEVHEEIVDFEPWMLDPSAAITGRVAGVTLQITGSSNVTEMRAAG--------EGGA---LFGHEVLAYHPEALLARGELP 233          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A7S2RHU4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHU4_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.940e-21
Identity = 62/163 (38.04%), Postives = 93/163 (57.06%), Query Frame = 0
Query:    6 RQLVLR-LPDGLKETMRERVAADAGMEGVDF---------TPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQDVPE 158
            RQ++LR LP+ L E +RE++  +  +  V F         T +   S++  F +    YP  LV++PC +E+ KT D+ T FKS D+GQMLIV+++E   +K +    GV  QR +  GLTPPT  + RRRF + + +   F R EV  VE ++LK+    PE
Sbjct:   14 RQVILRILPESLLEAIREKLV-EGSLSDVQFFFEDPPALSTLQVSPSQKMVFQLGDMIYPGLLVNLPCPVESHKTFDRITTFKSADIGQMLIVFENEGEREKAE-KECGV-EQRFFHSGLTPPTSYVTRRRFAQTKSELRSFTRKEVSEVEDELLKLMSSTPE 173          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A397DDH0_9STRA (TAFII55_N domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DDH0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.680e-18
Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 0
Query:    7 QLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLY------PDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKM 152
            Q +LR+P  + E +R+++A +  + GVD       +R F F +D  + PA L  +PC++ET KT D++ F+KSGD+GQ+L+V+                  Q LY      P G+TPPT NIV+R++ K R     F +A+V RVE  ++K+
Sbjct:    4 QYLLRVPKRVGEELRKKMA-EKEVRGVDVVAGAD-NRNFKFRIDDTELPATLCQLPCIVETHKTYDEKLFYKSGDIGQILLVHDTPEE-------------QMLYETVTELPGGITPPTTNIVKRKYAKTRKS-PIFPKADVARVEDTLVKI 139          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A2V3IJD7_9FLOR (Transcription initiation factor TFIID subunit 7 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJD7_9FLOR)

HSP 1 Score: 94.4 bits (233), Expect = 4.960e-18
Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 0
Query:    7 QLVLRLPDGLKETMRERVAADAGMEGVD-------FTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQV 149
            Q +LRLP  L E MR  ++++   EG         F  + K  R   FT+DGK YPA L+D+PC++ET KT DKRTF+KSGD+ Q+L+V   +    K              PDG+TP TK   +R     +P    F R EV  +E ++
Sbjct:    5 QFILRLPQPLVEPMRFALSSNKKREGAGDDRQASKFEIDFKDERNAIFTIDGKHYPASLMDLPCIVETHKTADKRTFYKSGDLHQVLVVRMPDEPVPK----------HTQLPDGITPATKGAAKR----MKPPERFFTRDEVELIERRI 140          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A8J2T034_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T034_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 8.890e-18
Identity = 56/142 (39.44%), Postives = 83/142 (58.45%), Query Frame = 0
Query:   20 MRERVAADAGMEGVDFTPEKKGSRR--------FTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNAS---GVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVL 150
            + ++VA D   EGV+FTPE   S +        F   +D    PARLV++P ++ET KT D+ T+ K GDVGQ+L+V+KDE++  +D    +   G     ++PDGLTPP ++++RRRF KAR    K    E +R    +L
Sbjct:   67 LEQKVAKDK-TEGVEFTPEGDTSVKQDDFHSLDFRCKIDDLDLPARLVNLPTIVETHKTWDRETYVKCGDVGQILLVFKDESSRTQDKARQAAHAGSAWSLVHPDGLTPPLQDVIRRRFSKARKRSRKDVTVEEVRRAEDLL 207          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A7S3JUW2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUW2_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.780e-17
Identity = 63/163 (38.65%), Postives = 91/163 (55.83%), Query Frame = 0
Query:    1 MSTTYR-QLVLRL--PDGLKETMRERVAADAGMEGVDFTPEKKG-----SRRFTFTMDGKKYPARLVDMPCVLETQKTLDK-RTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKF--DRAEVIRVESQVLKM 152
            MSTT + QL+L    PD L +      AA+ G E      E++      SRR    + G  YP RLV++P ++ET KT D  +  +K GDVGQ++IVY++E A + D+G       Q +Y DG++PP KN V RRF KAR  R K   +  E+  VE+++  +
Sbjct:    1 MSTTVQTQLLLHAESPDVLAKLSELVDAAEGGGELEIVAEEREANENESSRRMKLVIMGHTYPTRLVNLPTLVETHKTFDNGKNVYKCGDVGQVVIVYQNEAARRADEGRTIHKAWQHVYQDGISPPLKNCVERRFAKARRRRAKVQANARELHAVEARIASL 163          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A1V9ZGC5_9STRA (TAFII55_N domain-containing protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGC5_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.420e-17
Identity = 55/160 (34.38%), Postives = 88/160 (55.00%), Query Frame = 0
Query:    7 QLVLRLPDGLKETMRERVAADAGMEGVDFTP------------EKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKAR--PDRGKFDRAEVIRVESQVLKM 152
            Q +LR+P  +   +R+++  +  + GVD               +   ++ F F +DG++YP  L  +PC++ET KT D   F+KSG++GQ+ +V+  EN  KK      G       P GLTPPT NIV+R++ K +  PD   F +A+V RVE  ++K+
Sbjct:    3 QYLLRVPRKIGNELRKKIQ-EKDINGVDLVAGGMSIRVYESNDDVADNKYFKFHIDGQEYPVTLNQLPCIMETHKTYDDNLFYKSGEIGQIFMVH--ENFEKK-----KGYEDVTELPSGLTPPTTNIVKRKYAKTKKYPD---FPKADVARVEDGLIKI 151          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: W4GBL9_9STRA (TAFII55_N domain-containing protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GBL9_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.890e-17
Identity = 55/152 (36.18%), Postives = 86/152 (56.58%), Query Frame = 0
Query:    7 QLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDGNASGVGPQRLY------PDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKM 152
            Q +LR+P  + E +R+++A +  + GVD       +R F F +D  + PA L  +PC++ET KT D++ F+KSGD+GQ+L+V+                  Q LY      P G+TPPT NIV+R++ K R     F +A+V RVE  ++K+
Sbjct:    4 QYLLRVPKRVGEELRKKMA-EKEVRGVDVVAGAD-NRNFKFRIDDTELPATLCQLPCIVETHKTYDEKLFYKSGDIGQILLVHDTPEE-------------QMLYETVTELPGGITPPTTNIVKRKYAKTRKS-PIFPKADVARVEDTLVKI 139          
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Match: A0A397VEC4_9GLOM (TAFII55 protein conserved region-domain-containing protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VEC4_9GLOM)

HSP 1 Score: 91.3 bits (225), Expect = 1.310e-16
Identity = 60/160 (37.50%), Postives = 84/160 (52.50%), Query Frame = 0
Query:    7 QLVLRL--PDGLKETMRERVAADAGMEGVDFTPEK-----KGSRRFTFTMDGKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYK----DENAYKKDDGNASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVLKMQQD 155
            Q +LRL  P+ +K+  RE+V          F PE      K SRR  FT + +KY ARLVD+PC++E QKT + + F+K  D+ QMLIV       E  +   +  AS    Q  +PDGLTPP KN+  RRF      R +    ++  +E +V K+  D
Sbjct:   91 QFILRLMVPEDVKQRFREKVRRQK------FAPEDVEIMFKDSRRAIFTFENQKYSARLVDLPCIIEAQKTFNNKQFYKVADICQMLIVESPIDTQEEVHMFTENMASSSIDQFEWPDGLTPPLKNVRNRRF------RKRISNKKIEDIEKEVEKLLHD 238          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig88.16794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G280_ECTSI2.160e-19198.03TAFII55_N domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YLK6_9STRA4.700e-5438.76TAFII55 protein conserved region-domain-containing... [more]
A0A7S2RHU4_9STRA1.940e-2138.04Hypothetical protein (Fragment) n=2 Tax=Rhizochrom... [more]
A0A397DDH0_9STRA1.680e-1836.18TAFII55_N domain-containing protein n=2 Tax=Aphano... [more]
A0A2V3IJD7_9FLOR4.960e-1838.00Transcription initiation factor TFIID subunit 7 n=... [more]
A0A8J2T034_9STRA8.890e-1839.44Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JUW2_9STRA2.780e-1738.65Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A1V9ZGC5_9STRA3.420e-1734.38TAFII55_N domain-containing protein (Fragment) n=1... [more]
W4GBL9_9STRA6.890e-1736.18TAFII55_N domain-containing protein n=5 Tax=Aphano... [more]
A0A397VEC4_9GLOM1.310e-1637.50TAFII55 protein conserved region-domain-containing... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006751TAFII55 protein, conserved regionSMARTSM01370TAFII55_N_2coord: 7..168
e-value: 1.9E-30
score: 117.2
IPR006751TAFII55 protein, conserved regionPFAMPF04658TAFII55_Ncoord: 7..133
e-value: 2.0E-28
score: 99.1
IPR037817Transcription initiation factor TFIID subunit 7PANTHERPTHR12228TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATEDcoord: 6..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig88contigE-siliculosus-1a_M_contig88:45309..51231 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig88.16794.1mRNA_E-siliculosus-1a_M_contig88.16794.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig88 44079..51706 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig88.16794.1 ID=prot_E-siliculosus-1a_M_contig88.16794.1|Name=mRNA_E-siliculosus-1a_M_contig88.16794.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=357bp
MSTTYRQLVLRLPDGLKETMRERVAADAGMEGVDFTPEKKGSRRFTFTMD
GKKYPARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKDDG
NASGVGPQRLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQVL
KMQQDVPEGPDRSRKAGSSGGGGITAGGGMSGSSSRGGSADASGGGSSSS
RSRTSRSSGGGGGSSGGGGGGGGEVGGDGVTFEHEEIVPFEPWMADPKFA
ALGRLEGITLEVTGTTEKPEAGAAGAAGGAGGGEGSTAPRLFGSELLYEH
PEILLAVVTLPSVGVPAAMPSLGEGVGLDPDDASAVMEDMNDAEDVLGVE
DIFLGM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037817TAF7
IPR006751TAFII55_prot_cons_reg