mRNA_E-siliculosus-1a_M_contig87.16768.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig87.16768.1
Unique NamemRNA_E-siliculosus-1a_M_contig87.16768.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: D7FW15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW15_ECTSI)

HSP 1 Score: 549 bits (1414), Expect = 2.100e-192
Identity = 257/263 (97.72%), Postives = 259/263 (98.48%), Query Frame = 2 
Query:   80 MAADERMPLVGPDGVAKVAAPLHPNSRPISFRGGVMVLVGATLLYVAALASARAFPRGVKGRASPPSPYKGLDVDESSVEGAGLRLDEIDGTTLAPVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCADG 868
            MAADERMPLVGPDG AKVAAPLHPNSRPIS RGGV VLVGATLL+VAALASARAFPRGVKGRASPPSPYKGLDVDESSVEGAGLRLDEIDGTTLAPVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFC FGISHEV+WGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCADG
Sbjct:    1 MAADERMPLVGPDGAAKVAAPLHPNSRPISLRGGVTVLVGATLLFVAALASARAFPRGVKGRASPPSPYKGLDVDESSVEGAGLRLDEIDGTTLAPVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCGFGISHEVVWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCADG 263
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: A0A6H5JXZ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXZ9_9PHAE)

HSP 1 Score: 498 bits (1283), Expect = 1.580e-172
Identity = 235/263 (89.35%), Postives = 242/263 (92.02%), Query Frame = 2 
Query:   80 MAADERMPLVGPDGVAKVAAPLHPNSRPISFRGGVMVLVGATLLYVAALASARAFPRGVKGRASPPSPYKGLDVDESSVEGAGLRLDEIDGTTLAPVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCADG 868
            MA DERMPLVGPDG AK AAPL PNS PIS RG V VLVGATLLYVAALA AR FPRGVKGR SP SPYKG DV+ESSVEGA LRLDEIDGTTLAP HVTTAECTGDTSKPAV+GFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLEN+LEFESDPE+YLPAWGGFCSFGISHE IWGPDVLGPPSNPD WLIEDDRLYLFRSETPY KF D+KAR IKHGNQ+WTEWF GNPSNEGTVMTPFNTACFCSEE+CADG
Sbjct:    1 MATDERMPLVGPDGAAKEAAPLQPNSSPISLRGTVKVLVGATLLYVAALAGARTFPRGVKGRVSPLSPYKGFDVNESSVEGARLRLDEIDGTTLAPAHVTTAECTGDTSKPAVKGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENQLEFESDPEKYLPAWGGFCSFGISHEDIWGPDVLGPPSNPDIWLIEDDRLYLFRSETPYDKFKDDKARYIKHGNQVWTEWFGGNPSNEGTVMTPFNTACFCSEESCADG 263
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: D7FW13_ECTSI (YHS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW13_ECTSI)

HSP 1 Score: 166 bits (419), Expect = 1.670e-43
Identity = 86/201 (42.79%), Postives = 113/201 (56.22%), Query Frame = 2 
Query:  302 DESSVEGAGLRLDEIDGTTLA----------PVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLI--EDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCADG 868
            D  + E     LD  +GT L+          P   TTA+CTGDT  P + G D+VAY +L  G+  V G       +G  Y F FS++EN   FESDP RY+PAWGGFCS+G++ E  W PD+LGP  +P  WLI   D +L++FRSE P  KF+      ++ G+ +W  WF   P+  G    P NTAC CSEE C +G
Sbjct:   67 DSLTAERVEYSLDGAEGTRLSGLVNPNNGSHPTLTTTADCTGDTHLPVLGGVDVVAYWTLPAGSKPVFGTPNLVSLFGD-YRFYFSSIENLRTFESDPVRYIPAWGGFCSYGVAAETFWRPDILGPFGDPSKWLILPGDGKLHVFRSERPMTKFLLAPGENLEAGDAIWNGWF---PAERGGAA-PLNTACLCSEEMCVNG 262
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: D7G5N6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5N6_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 2.630e-38
Identity = 74/167 (44.31%), Postives = 102/167 (61.08%), Query Frame = 2 
Query:  371 HVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDR-LYLFRSETPYGKFMDNKARCIKHGNQMWTEWFA-GNPSNEGTVMTPFNTACFCSEETCAD 865
              TT EC G +++P + G D+V+Y SL+ G   + G  E+ V+Y  GYTFLF++ +NK  FE+ P  Y+PAWGGFC++GI+ E  W    LGPPS+P+ WLI DD  L +FRSE P   FM++    I  GN++WT W+  G         +  NTAC C+ E C D
Sbjct:   69 QTTTWEC-GTSTEPVLNGADVVSYFSLKEGEAAMYGFEEYPVKYN-GYTFLFASAQNKALFEASPLDYIPAWGGFCAYGIAAEDWWTVSTLGPPSDPNSWLITDDNVLRIFRSEVPKAYFMEDIPGNIATGNRIWTGWWGEGTLPGADDTGSAMNTACLCNIEICLD 233
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: D7G8M9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8M9_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 1.180e-37
Identity = 76/164 (46.34%), Postives = 97/164 (59.15%), Query Frame = 2 
Query:  380 TAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDR-LYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAG-NPSNEGTVMTPFNTACFCSEETCAD 865
            T+EC    +K  +EG DL  Y SL+ G   V G+ E    Y  GY F F + ENK  FE  P+ Y+P WGGFCS+GIS E  W  D LGPP++P+ WLI DD  L+ FRSE P  KF+ +    I  GNQ+W  W+    P+ +G   +P +T CFCS ETC D
Sbjct:   92 TSECA-TAAKVVMEGADLTRYFSLELGAAAVYGVEEHEALYN-GYKFWFESAENKAMFEESPKSYIPQWGGFCSWGISREDWWNADELGPPADPNQWLITDDGGLHFFRSELPMSKFLGDVPGNIVAGNQIWHSWWGDVEPAADG-AGSPLDTDCFCSTETCED 252
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: A0A7S3JR48_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JR48_9STRA)

HSP 1 Score: 136 bits (342), Expect = 3.300e-32
Identity = 62/159 (38.99%), Postives = 95/159 (59.75%), Query Frame = 2 
Query:  368 VHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMD-NKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACF 841
            +   ++ C   ++ P +EG D+VAYR L  G +   G  +++ +YG+ YTF F   EN+  F S+P++Y+P +GGFCS+GI++E  W  D LGP +N + W+I DD L++F   TP  KF+  N    I+ GNQ+W+ W+   P+        FNT CF
Sbjct:  132 IAAASSSCVDPSAGPVLEGADVVAYRYLNVGANATIGSADYAAKYGE-YTFYFENAENRATFLSNPDKYVPKFGGFCSYGITNEFFWTKDTLGPNANKNVWIIYDDHLFVFMYCTPEHKFVSRNITEEIERGNQIWSTWWNDVPT--------FNTGCF 281
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: A0A6V1WB01_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1WB01_HETAK)

HSP 1 Score: 120 bits (301), Expect = 1.610e-27
Identity = 58/150 (38.67%), Postives = 82/150 (54.67%), Query Frame = 2 
Query:  395 GDTSKPAVEGFDLVAYRSL-QPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACF 841
            G+++ P ++G+D+VAY  L +  T  V G  ++   Y  GY F FST ENK  F   PE+Y+P +G FCS+GIS E  W P  LGPP +P+ W I    L LF  E    KFM +  +  + G++ W  W+      E  +   FNT C+
Sbjct:   69 GESAAPVIQGYDVVAYFDLPEDATEAVLGKEDYKANY-HGYDFYFSTEENKQAFLGSPEKYVPKYGAFCSWGISAESFWTPSTLGPPVDPNVWQIYAGELLLFYREAAKKKFMVDVNKHFEEGSKRWLNWYG-----EEGLHDVFNTGCY 212
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: A0A7S3UVA0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVA0_HETAK)

HSP 1 Score: 117 bits (293), Expect = 1.060e-26
Identity = 60/152 (39.47%), Postives = 81/152 (53.29%), Query Frame = 2 
Query:  380 TAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTA 835
            +A C    + P +EG+D+VAY  L P   GV+G  EF+  Y QG+ F FS+ EN  +FESDPE+Y+PAWGGFC++G++ E  W  + +     PD W I D RL+ F        F       I+ G+  W  W       EG     FNTA
Sbjct:    5 SAACLDAGAGPVLEGYDVVAYFGLDPLDDGVQGSSEFTSVY-QGFEFYFSSKENMEKFESDPEKYVPAWGGFCAYGVAEETWWTAETMSAGVVPDAWRIIDGRLFFFHDIGVAAWFAALLPDAIREGDATWHGW-----GLEGYNTNCFNTA 150
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: A0A7S2FZR2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FZR2_9STRA)

HSP 1 Score: 114 bits (285), Expect = 3.840e-25
Identity = 66/183 (36.07%), Postives = 95/183 (51.91%), Query Frame = 2 
Query:  311 SVEGAGLRLDEIDGTTLAPVHVTTAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFSTLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMD-NKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEET 856
            + +GA  + D+   T   P     +EC   T+ PA++G+DLV Y SL+ G +G +G  EF   +  GYTF F   +N   F S P  YLP +GGF ++ IS +  +  D LGP +NP+ W I DD+LY F  +T   KF   N +  +K GN+ W   F  + +  G      NT C+    T
Sbjct:   50 AADGAISKPDDPGKTWSNPKGRHQSECMLTTTGPAMDGYDLVEYFSLESGANGRKGTEEFESTFA-GYTFRFLNNKNMKAFGSMPTSYLPQFGGFDAYSISEDPWYTADTLGPGANPNVWKILDDKLYFFMFDTTMEKFQKGNMSATVKTGNERWDAMF--DDTEYG-----LNTGCYWYNNT 224
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BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Match: D7FW14_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW14_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 1.070e-24
Identity = 45/104 (43.27%), Postives = 63/104 (60.58%), Query Frame = 2 
Query:  554 ESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIEDDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFNTACFCSEETCAD 865
            + D  +Y+PAWGGFCS+GI++E +W    LGP  NP  W I   RL++FRS TP  +F ++    +  GN +W  WF G    E  ++ P NTACFC++  C D
Sbjct:   19 QHDKLKYVPAWGGFCSYGIANESVWTSTTLGPFGNPSKWGIYGGRLHIFRSSTPKEEFEEDIPGNLDRGNAVWEGWFGG--MEESLMVPPINTACFCNDHICDD 120
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig87.16768.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW15_ECTSI2.100e-19297.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JXZ9_9PHAE1.580e-17289.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW13_ECTSI1.670e-4342.79YHS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7G5N6_ECTSI2.630e-3844.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8M9_ECTSI1.180e-3746.34Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3JR48_9STRA3.300e-3238.99Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A6V1WB01_HETAK1.610e-2738.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S3UVA0_HETAK1.060e-2639.47Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S2FZR2_9STRA3.840e-2536.07Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D7FW14_ECTSI1.070e-2443.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig87contigE-siliculosus-1a_M_contig87:584794..588926 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size792
Model size1777
Exons4
Ec32 orthologEc-01_002970.1
Ec32 ortholog descriptionconserved unknown protein
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
EggNOG OGs2D48G@1,2SU9E@2759
Seed eggNOG ortholog2880.D7G5N6
Seed ortholog evalue1.5e-32
Seed ortholog score146.7
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig87.16768.1prot_E-siliculosus-1a_M_contig87.16768.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig87 585700..588847 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936338.0501587-UTR-E-siliculosus-1a_M_contig87:584793..5856991622936338.0501587-UTR-E-siliculosus-1a_M_contig87:584793..585699Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 584794..585699 -
1696251032.5231209-UTR-E-siliculosus-1a_M_contig87:584793..5856991696251032.5231209-UTR-E-siliculosus-1a_M_contig87:584793..585699Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 584794..585699 -
1622936338.1410632-UTR-E-siliculosus-1a_M_contig87:588847..5889261622936338.1410632-UTR-E-siliculosus-1a_M_contig87:588847..588926Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 588848..588926 -
1696251032.598953-UTR-E-siliculosus-1a_M_contig87:588847..5889261696251032.598953-UTR-E-siliculosus-1a_M_contig87:588847..588926Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig87 588848..588926 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936338.073848-CDS-E-siliculosus-1a_M_contig87:585699..5858651622936338.073848-CDS-E-siliculosus-1a_M_contig87:585699..585865Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 585700..585865 -
1696251032.5347955-CDS-E-siliculosus-1a_M_contig87:585699..5858651696251032.5347955-CDS-E-siliculosus-1a_M_contig87:585699..585865Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 585700..585865 -
1622936338.0943897-CDS-E-siliculosus-1a_M_contig87:586598..5867471622936338.0943897-CDS-E-siliculosus-1a_M_contig87:586598..586747Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 586599..586747 -
1696251032.5468197-CDS-E-siliculosus-1a_M_contig87:586598..5867471696251032.5468197-CDS-E-siliculosus-1a_M_contig87:586598..586747Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 586599..586747 -
1622936338.1091552-CDS-E-siliculosus-1a_M_contig87:587482..5876701622936338.1091552-CDS-E-siliculosus-1a_M_contig87:587482..587670Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 587483..587670 -
1696251032.5602007-CDS-E-siliculosus-1a_M_contig87:587482..5876701696251032.5602007-CDS-E-siliculosus-1a_M_contig87:587482..587670Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 587483..587670 -
1622936338.1251338-CDS-E-siliculosus-1a_M_contig87:588558..5888471622936338.1251338-CDS-E-siliculosus-1a_M_contig87:588558..588847Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 588559..588847 -
1696251032.582056-CDS-E-siliculosus-1a_M_contig87:588558..5888471696251032.582056-CDS-E-siliculosus-1a_M_contig87:588558..588847Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig87 588559..588847 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig87.16768.1

>prot_E-siliculosus-1a_M_contig87.16768.1 ID=prot_E-siliculosus-1a_M_contig87.16768.1|Name=mRNA_E-siliculosus-1a_M_contig87.16768.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=264bp
MAADERMPLVGPDGVAKVAAPLHPNSRPISFRGGVMVLVGATLLYVAALA
SARAFPRGVKGRASPPSPYKGLDVDESSVEGAGLRLDEIDGTTLAPVHVT
TAECTGDTSKPAVEGFDLVAYRSLQPGTHGVRGLWEFSVQYGQGYTFLFS
TLENKLEFESDPERYLPAWGGFCSFGISHEVIWGPDVLGPPSNPDFWLIE
DDRLYLFRSETPYGKFMDNKARCIKHGNQMWTEWFAGNPSNEGTVMTPFN
TACFCSEETCADG*
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mRNA from alignment at E-siliculosus-1a_M_contig87:584794..588926-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig87.16768.1 ID=mRNA_E-siliculosus-1a_M_contig87.16768.1|Name=mRNA_E-siliculosus-1a_M_contig87.16768.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=4133bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:584794..588926- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
CTTACCCCGGGCACCCATTTTTGTGCACAGCAGAGGGCTCCAAACTCGAG
CTTTTACTCCACACAACAGCCTCCGCGCCATGGCAGCTGATGAACGAATG
CCGCTGGTGGGGCCTGACGGCGTGGCGAAGGTAGCAGCGCCTCTGCACCC
TAACTCAAGGCCAATAAGCTTTCGAGGCGGTGTCATGGTGCTTGTCGGAG
CCACCTTGCTGTACGTGGCGGCCTTGGCAAGCGCGCGTGCATTCCCACGC
GGCGTCAAGGGACGCGCATCGCCGCCTTCGCCGTACAAGGGATTGGATGT
CGACGAGAGCTCGGTGGAGGGGGCGGGGTTGAGGTTGGATGAGATCGACG
GGACGACCTTGGCTCCAGGTGCGGTGATCGTGGACAAACTCAACTTGCTT
CCCACTAAGAACTGCTTGCTTCAAATGTCTGAGACCCAGACGTGTCTGTT
GTACAAGCAGCATATGTTAGACGGCGTACAGCAGTAGTCCGCGGGTTAAA
AGACCACCCGTACCCATCTACGGGCATGCCATCATATCTGCCGTCCACCG
CAATCCCGCCTGCCTCCCTCTGTCGTGTTCAGCATCACCACTGCTCTCTT
TGGGCCGCCCAGTCCGTTGCACTGTTAGAGTACTCTTTCTCGGAATCGTC
ATCTACAACTTCTCCCCGATGACTTATCCTCCAAATTTTTGTTTACTGAT
GGCGTCAAGGCTTTTTTCTTCATGCGTATGCGTATGTACTCACAAGAAAG
GCGCTCAAAAAGTTGTCCCTTTGTAGTACTATAGATCCCGGTACGTACAC
CAACAGAGAGGTTACACAGGTTCCCCGCAGTTGTGCATGAAGAAGTTCGT
GTGCCCGTTGCCTGTTGCATTAACACGGGATGCGTTTCGACAAGCGTGAC
AGAGCACTCGGTCACCTTTGGGCAAAACCTTCCGGGAATCTGCTGGGCGA
TACATACCCCTACATGTGTAATAGTTTCATCCCACAAGGAATGTCGTAGA
AGAAATAGAGGCAGGCACATGTGCCGAGCCGCGGACGACGGAATACAACA
GTAGGTACCATATGCAACTCTTTCATCTTTATCTCACAGCCCCCGTATGG
TAATCTGCTGCGTCCGCGCCCCTTTGTCTGCGTGTGCTTTTTAGAAAGTA
CGCTAATGTAATCTCACAGAAAGACCACCCGTTTTTGTCTCTTGCTCGTT
CGTTTCCATCGTGCTGCTGTGCCCTTCCACGCACCAACGCTGGCGGTGTG
GTGCAGTTCACGTGACGACCGCGGAGTGCACTGGGGACACGAGCAAGCCG
GCGGTGGAAGGGTTCGATCTTGTGGCGTATCGATCCCTCCAACCCGGCAC
ACACGGAGTCCGCGGCTTGTGGGAGTTTTCGGTACAGTACGGCCAAGGAT
ATACTTTCCTGTTTTCGACACTCGAAAACAAGCTAGAATTTGAGGTGGGT
CTGTCAAATATTGACCGAAAGTGTGGTGGTTGGTGTTGCACGGTATGTGA
ACAGGGAGTGCCTGCGACCTTGTGCGATCGGAAGGATGGCTCGTCTATCT
TTTTGGAGACAAGTCGCGAAAACACGAACAGCTTTCATTCGAACGACGAA
ATACGAAATACCAGTACAAGATATCGTAACAAGGTGTCGCGCTTATTTTT
TCATTTTTTCCCTATCAGCAACCCTAGTACGGGTCACAGCTGCTGCGGGT
GCACAACATACGAAACTGTTTGGTTAAAATGAAAATCGAACATGATATTC
ATTCCCTACTTTCCAATCGTGTTGGAAGTGACCTAAGACCAAAAACCGTT
GGGTTCATCCTAGTCGTCTATTTTCTCGCCGTCGCCCGCACTTTCCACCT
TCCCTGACGGTATTTGTCTCTCTCAACAACCGCGCGTCCGGCATGCTTGA
TGCAGTCTTCATTCAGCCGACCATCACGCCATGTATCGAAATGTTAAACT
TTGGATTGTCTTGCACTACATACCGTAGCAGACTTTCCGTGCTTTCTTGT
GATATCCCTCCCACCTCCTTCCCAGGGCAAAGTAGGAGAGAACGATTGGC
CATCGGTGATCGGTCTGTGGGGAAAATCCTCCGTCCTGTCGAGGACGAAT
GGTCAATGAGCTCAACCGCTAAGGCATGAAAATATGAGAGTTCGTCCCCC
CCCCCCCCCCTTGGCGTGTTGGTGTGCAGAGCGATCCAGAGAGATATCTC
CCCGCTTGGGGCGGCTTCTGCAGCTTCGGAATCAGCCACGAAGTTATTTG
GGGTCCTGACGTCCTCGGGCCACCTTCCAACCCGGATTTCTGGTTGATCG
AGGATGATCGGCTGTACCTGTTCCGAAGGTATTGCTTGCGTGGTTCTCTT
GGTCGTCTTTTTGTGTTCGTTCTGGTTTGATAGGGTGATCGGCTGTTCCT
GTCCCGAAGATATTGCTTGCTTAACCCGGATTTCTGGTTGGTCGAGCATG
ATCGGCTGTACCTGTTCCGAAGGTGTTGCTTGCTCGCTTTCTCTTGTTCG
CCTTGGGTTTGCAAGCGCGCGGGTGTGTGAGAGGGCTTTTTTTTGTTTGT
ATCGATCCCGCCAGACCAATTGGATTGCACGGCTTGAGAAATTGCAGGCC
GCGTGGCCCACCGGCAGGGGGGGGGCGGGCGGGCGGATGAGACTGGACGT
GGGGGTGCAGCCTCGGGGTTACAGAGCACCCACCACATACAATAGGTCAT
TGCTGTATACAATGACGAGCGTTTTTGTACCCTCGTGGTAGTCGGGCATC
CGAAAGCTAGCGGCTGAGTCCAACGGGGACCAAAGACCCAAACAATGCCT
CGTCGCTGGTTGTGGAAGTAGGTGTGGGTGGAAGCCTTTCTTGTACGCGT
GTTTGTTTCGCTACGCTACAGCTCCTTTGTCTACTTGACCCCGTATAGAT
GCTCCACCCCAGCTACTACTGCTGGCCGCAATGCGTTGAAGCACACCATG
CTTGGTTCGGTGGTGGCCAAGGACCTTTGATTCCGTGTACCCGCGTTCTC
CACCCAACCCGTCTCTCTTTGTCGCTTGTCGTTGTCGTATCGTGCCCCGC
CCGTCCCAAAGCGAAACACCATATGGAAAGTTCATGGACAACAAGGCGCG
GTGTATCAAGCACGGGAACCAAATGTGGACAGAATGGTTCGCGGGGAACC
CGTCCAATGAGGGGACGGTGATGACGCCCTTCAACACTGCCTGCTTCTGC
AGCGAAGAAACATGCGCGGATGGGTGACAGCCCAAACGAGTTCTAGATGA
GGGAAAAGCCTGCCCACCTTTTTTTTCTTTCAGTCCTCGCTCAACGTGTA
CGGTTTGATTCGTTAGATGGACATCGTTGCTAGCCGAACATGTCGCGGAG
ACTTGGGCGCGTCGGTTTGACACCTCGACGTTTGTATCGGTGCATGTGTC
CGTGCACTCGCTTGTTAGTTTTTATCCCTCCTGTTGCACCCGCTTGTTAG
TTTTTATCCCTTCCTGTCTCTTGTATTGTCGTGACCGCCTTTTTTCCTTG
CACTCAACCCTTCGTTATCGATTCGCGTTTCACTTGCCGTGCTCGTTTTA
GGCCCCTCATATTAGAGGGCGTTTTTTTGTTTTGAGTGGTGAAGGTGTAT
GTGTTTGATTGGTACGGTGGTGTGCATCACCTCAGTGCCTAGCCTGGGGG
TGCACTCTATCTCTTGTGCCGGTGCGGACCAGCAAGTGCCATGGCACTTG
CAACTGCTGTGACTTTGGGTGGAGGTTGTGGAGTCTCCGTGCATGACCTG
CGGTTCGATTTGGTGGTGTGTCGAAAAAGCGAGCAGCAAAGTTCGCTCGG
AAGGTGATTTTGATTGCTGTGTCTTGAAGGGGGTTATTTTGTACCATACA
TGTTTTCACTTCTTTTTTTATGTTGTGCTCACTTTGTTTTCGCACGTCTA
CTTGCGTGCGAGGAAGCGACAGAGGTACCACCTGCTGCTGCCGTCAGGAA
GCGGTACCTGACGCTGTTGGTGCGTGGTAGTAGTAAATGCTGTCAGCAGA
CGTTCCGTGTCTTGGAGGAATGTCACGAGGTCTACGGCGGGGTGATATGA
CAACAGCTGTTGTAACTTCAAAGAGTGTTGTAGATGAATTCTGATTTGTG
ACTGTTACTGACTAACCACACACTTTCTTCGAA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig87:584794..588926-

>mRNA_E-siliculosus-1a_M_contig87.16768.1 ID=mRNA_E-siliculosus-1a_M_contig87.16768.1|Name=mRNA_E-siliculosus-1a_M_contig87.16768.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=1584bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig87:584794..588926- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCAGCTGATGAACGAATGCCGCTGGTGGGGCCTGACGGCGTGGCGAA
GGTAGCAGCGCCTCTGCACCCTAACTCAAGGCCAATAAGCTTTCGAGGCG
GTGTCATGGTGCTTGTCGGAGCCACCTTGCTGTACGTGGCGGCCTTGGCA
AGCGCGCGTGCATTCCCACGCGGCGTCAAGGGACGCGCATCGCCGCCTTC
GCCGTACAAGGGATTGGATGTCGACGAGAGCTCGGTGGAGGGGGCGGGGT
TGAGGTTGGATGAGATCGACGGGACGACCTTGGCTCCAGATGGCAGCTGA
TGAACGAATGCCGCTGGTGGGGCCTGACGGCGTGGCGAAGGTAGCAGCGC
CTCTGCACCCTAACTCAAGGCCAATAAGCTTTCGAGGCGGTGTCATGGTG
CTTGTCGGAGCCACCTTGCTGTACGTGGCGGCCTTGGCAAGCGCGCGTGC
ATTCCCACGCGGCGTCAAGGGACGCGCATCGCCGCCTTCGCCGTACAAGG
GATTGGATGTCGACGAGAGCTCGGTGGAGGGGGCGGGGTTGAGGTTGGAT
GAGATCGACGGGACGACCTTGGCTCCAGTTCACGTGACGACCGCGGAGTG
CACTGGGGACACGAGCAAGCCGGCGGTGGAAGGGTTCGATCTTGTGGCGT
ATCGATCCCTCCAACCCGGCACACACGGAGTCCGCGGCTTGTGGGAGTTT
TCGGTACAGTACGGCCAAGGATATACTTTCCTGTTTTCGACACTCGAAAA
CAAGCTAGAATTTGAGTTCACGTGACGACCGCGGAGTGCACTGGGGACAC
GAGCAAGCCGGCGGTGGAAGGGTTCGATCTTGTGGCGTATCGATCCCTCC
AACCCGGCACACACGGAGTCCGCGGCTTGTGGGAGTTTTCGGTACAGTAC
GGCCAAGGATATACTTTCCTGTTTTCGACACTCGAAAACAAGCTAGAATT
TGAGAGCGATCCAGAGAGATATCTCCCCGCTTGGGGCGGCTTCTGCAGCT
TCGGAATCAGCCACGAAGTTATTTGGGGTCCTGACGTCCTCGGGCCACCT
TCCAACCCGGATTTCTGGTTGATCGAGGATGATCGGCTGTACCTGTTCCG
AAGAGCGATCCAGAGAGATATCTCCCCGCTTGGGGCGGCTTCTGCAGCTT
CGGAATCAGCCACGAAGTTATTTGGGGTCCTGACGTCCTCGGGCCACCTT
CCAACCCGGATTTCTGGTTGATCGAGGATGATCGGCTGTACCTGTTCCGA
AGCGAAACACCATATGGAAAGTTCATGGACAACAAGGCGCGGTGTATCAA
GCACGGGAACCAAATGTGGACAGAATGGTTCGCGGGGAACCCGTCCAATG
AGGGGACGGTGATGACGCCCTTCAACACTGCCTGCTTCTGCAGCGAAGAA
ACATGCGCGGATGGGTGACGAAACACCATATGGAAAGTTCATGGACAACA
AGGCGCGGTGTATCAAGCACGGGAACCAAATGTGGACAGAATGGTTCGCG
GGGAACCCGTCCAATGAGGGGACGGTGATGACGCCCTTCAACACTGCCTG
CTTCTGCAGCGAAGAAACATGCGCGGATGGGTGA
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