prot_E-siliculosus-1a_M_contig869.16703.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig869.16703.1
Unique Nameprot_E-siliculosus-1a_M_contig869.16703.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length60
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: D1J7D0_ECTSI (Ferredoxin:thioredoxin reductase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D1J7D0_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 7.870e-34
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0
Query:    1 MTLKKTKKVTLNNKLDKGTRIKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            MTLKKTKKVTLNNKLDKGTRIKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK
Sbjct:    1 MTLKKTKKVTLNNKLDKGTRIKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A1I9LVX2_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LVX2_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 6.370e-26
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 MTLKKTKKVTLNNKLDKGTRIKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            M LKK K  T NNK++K TR+KEMH+FAELYAKKTNTFFC+DPSITSVI+AGLADYKNK
Sbjct:    1 MELKKIKNTTQNNKIEKSTRLKEMHNFAELYAKKTNTFFCLDPSITSVIIAGLADYKNK 59          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A5A4MHM1_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A5A4MHM1_9PHAE)

HSP 1 Score: 99.4 bits (246), Expect = 1.820e-25
Identity = 47/59 (79.66%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 MTLKKTKKVTLNNKLDKGTRIKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            M LK TKKV   NKL+KGTRIKEMH+FAELYAKKTNTFFC+DPSITSVI++GLADYK +
Sbjct:    1 MDLKNTKKVAQKNKLEKGTRIKEMHNFAELYAKKTNTFFCLDPSITSVIISGLADYKER 59          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A6B7EW12_9PHAE (Ferredoxin:thioredoxin reductase n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EW12_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 4.480e-21
Identity = 44/59 (74.58%), Postives = 50/59 (84.75%), Query Frame = 0
Query:    1 MTLKKTKKVTLNNKLDKGTRIKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            M LKKT K+    K+DKGT IKEMH F+ELYA+KTNTFFC+DPSITSVI+AGLADYK K
Sbjct:    1 MDLKKTTKLA-QKKIDKGTYIKEMHTFSELYAQKTNTFFCLDPSITSVIIAGLADYKEK 58          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A0S0GLW6_COSCS (Ferredoxin-thioredoxin reductase, catalytic chain n=28 Tax=Laminariales TaxID=2886 RepID=A0A0S0GLW6_COSCS)

HSP 1 Score: 71.2 bits (173), Expect = 1.500e-14
Identity = 30/40 (75.00%), Postives = 38/40 (95.00%), Query Frame = 0
Query:   20 RIKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            R+KEMH+FAE+YAK+TNTFFC+DPSITSVI+ GLA YK++
Sbjct:   12 RLKEMHNFAEIYAKQTNTFFCLDPSITSVIITGLATYKDQ 51          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A8F0JXX6_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Pseudochorda nagaii TaxID=74379 RepID=A0A8F0JXX6_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 1.720e-13
Identity = 29/39 (74.36%), Postives = 36/39 (92.31%), Query Frame = 0
Query:   21 IKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            +KEMH FA++YAK+TNTFFC+DPSITSVI+ GLA YK+K
Sbjct:   13 LKEMHTFAQIYAKQTNTFFCLDPSITSVIITGLATYKDK 51          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A2R4QPY4_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPY4_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.130e-11
Identity = 27/39 (69.23%), Postives = 34/39 (87.18%), Query Frame = 0
Query:   21 IKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            IK M HFAE YAK+TNTFF +DPSITS+I+ GLA+YK++
Sbjct:   13 IKAMQHFAETYAKQTNTFFSIDPSITSIIITGLANYKDR 51          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A8E6D4Y1_9PHAE (Ferredoxin-thioredoxin reductase beta subunit n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D4Y1_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 1.290e-11
Identity = 27/39 (69.23%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   21 IKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            +K MH FAE YAKKTNTFFCVDPS+T V++ GL+ YK K
Sbjct:   19 LKAMHKFAETYAKKTNTFFCVDPSVTCVVIKGLSVYKEK 57          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A8F0FAQ0_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAQ0_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 1.590e-11
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:   21 IKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            +  MH FAE YAK+TNTFFC DPSITS+++ GLA YK+K
Sbjct:   13 VNAMHKFAETYAKQTNTFFCFDPSITSIVITGLATYKDK 51          
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Match: A0A8F0F757_9PHAE (Ferredoxin-thioredoxin reductase, catalytic chain n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F757_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.410e-10
Identity = 24/39 (61.54%), Postives = 34/39 (87.18%), Query Frame = 0
Query:   21 IKEMHHFAELYAKKTNTFFCVDPSITSVIVAGLADYKNK 59
            ++ MH FA+ Y K+TNTFFC+DP+ITSV++ GLA+YK+K
Sbjct:   17 LESMHKFAQNYTKQTNTFFCLDPAITSVVITGLANYKSK 55          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig869.16703.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J7D0_ECTSI7.870e-34100.00Ferredoxin:thioredoxin reductase n=2 Tax=Ectocarpu... [more]
A0A1I9LVX2_9PHAE6.370e-2679.66Ferredoxin-thioredoxin reductase, catalytic chain ... [more]
A0A5A4MHM1_9PHAE1.820e-2579.66Ferredoxin-thioredoxin reductase, catalytic chain ... [more]
A0A6B7EW12_9PHAE4.480e-2174.58Ferredoxin:thioredoxin reductase n=1 Tax=Cladosiph... [more]
A0A0S0GLW6_COSCS1.500e-1475.00Ferredoxin-thioredoxin reductase, catalytic chain ... [more]
A0A8F0JXX6_9PHAE1.720e-1374.36Ferredoxin-thioredoxin reductase, catalytic chain ... [more]
A0A2R4QPY4_9PHAE1.130e-1169.23Ferredoxin-thioredoxin reductase, catalytic chain ... [more]
A0A8E6D4Y1_9PHAE1.290e-1169.23Ferredoxin-thioredoxin reductase beta subunit n=1 ... [more]
A0A8F0FAQ0_9PHAE1.590e-1166.67Ferredoxin-thioredoxin reductase, catalytic chain ... [more]
A0A8F0F757_9PHAE1.410e-1061.54Ferredoxin-thioredoxin reductase, catalytic chain ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036644Ferredoxin thioredoxin reductase catalytic beta subunit superfamilyGENE3D3.90.460.10coord: 11..59
e-value: 1.5E-9
score: 39.6
IPR036644Ferredoxin thioredoxin reductase catalytic beta subunit superfamilySUPERFAMILY57662Ferredoxin thioredoxin reductase (FTR), catalytic beta chaincoord: 20..58
IPR004209Ferredoxin thioredoxin reductase catalytic beta subunitPFAMPF02943FeThRed_Bcoord: 21..58
e-value: 7.0E-6
score: 26.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig869contigE-siliculosus-1a_M_contig869:5548..5727 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig869.16703.1mRNA_E-siliculosus-1a_M_contig869.16703.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig869 5376..5727 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig869.16703.1 ID=prot_E-siliculosus-1a_M_contig869.16703.1|Name=mRNA_E-siliculosus-1a_M_contig869.16703.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=60bp
MTLKKTKKVTLNNKLDKGTRIKEMHHFAELYAKKTNTFFCVDPSITSVIV
AGLADYKNK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004209FTR_bsu
IPR036644FTR_bsu_sf