prot_E-siliculosus-1a_M_contig84.16541.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig84.16541.1
Unique Nameprot_E-siliculosus-1a_M_contig84.16541.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length523
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig84.16541.1 vs. uniprot
Match: D8LQ05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ05_ECTSI)

HSP 1 Score: 804 bits (2076), Expect = 3.350e-290
Identity = 447/512 (87.30%), Postives = 453/512 (88.48%), Query Frame = 0 
Query:    1 MPSSLFGTVMLLAGASLTQAWVSPPAHQPRSPGAAGGAGAPSTGASPRFGRSSLSPRSKPLTRWDAQLERARSAHRVKDWTEVQHWCSRVIDLADDWNAVEQAHLRLALAAQKSSGVAGGRRAFQQGIRDCPSSDTLLVAWALMESKIKNSAHSRRRAWALIRRAIALNPNKNRRVLSWSVFAADLALAEAAGGRAAVVEAVRSALSPPTPPLPLLPEPTAAGGKAIGGAAGAAGGVSTRAHKREEETILATKLLDLCHSNKGFQDAPDVPPAATAAVXXXXXXXXXXXXA----PSERFQELAGELERKGGGAGAGVRALSGTWRLVFTTSADCNRYLSRTGNEVYQRLTPPIMAIKPRPSCKQPAPFRCEVLLRPAAPTTATGGGTADASYETPPLSPPSHGTKAAPKATVAYFFRGWADKSPPDQQREGCLLRQHVAARSATVVAGGETSAG----SPKRAPSPTPPPVVFSALGLVAARCKGLERLATQEVTYVGKQLRIGRTAEGDV 504
            MPSSLFGTV+LLAGASLT+AWVSPPAHQPRSPGAAGGA APSTGASP FGRSSLSPRSKPLTRWDAQLERARSAHRVKDWTEVQHWCSRVIDLADDWNAVEQAHLRLALAAQKSSGVAGGRRAFQQGIRDCPSSDTLLVAWALMESKIKNSAHSRRRAWALIRRAIALNPNKNRRVLSWSVFAADLALAEAAG                      LPEPTAAGGK IGGAA  AGGV TRA +REEETILATKLLDLCHSNKGFQ+AP+VPPAAT   XXXXXXXXXXXX     PSERFQELAGELERKGGGA AGVRALSGTWRLVFTTSADCNRYLSRTGNEVYQRLTPPIMAIKPRPSCKQPAPFRCEVLLRPAA TTATGGGTADASY T PLSPPSHGTKAAPKATVAYFFRGWADKSPPDQQREGCLL+QHVAARSA               S KRAPSPTPPP VFSALGLVAARCKGLERLATQEVTYVGKQLRIGRT EGDV
Sbjct:    1 MPSSLFGTVILLAGASLTKAWVSPPAHQPRSPGAAGGAAAPSTGASPCFGRSSLSPRSKPLTRWDAQLERARSAHRVKDWTEVQHWCSRVIDLADDWNAVEQAHLRLALAAQKSSGVAGGRRAFQQGIRDCPSSDTLLVAWALMESKIKNSAHSRRRAWALIRRAIALNPNKNRRVLSWSVFAADLALAEAAGXXXXXXXXXXXXXXXXXXXX-XLPEPTAAGGKGIGGAA--AGGVRTRALEREEETILATKLLDLCHSNKGFQEAPEVPPAATXXXXXXXXXXXXXXXXXXXXPSERFQELAGELERKGGGAAAGVRALSGTWRLVFTTSADCNRYLSRTGNEVYQRLTPPIMAIKPRPSCKQPAPFRCEVLLRPAAATTATGGGTADASYGTRPLSPPSHGTKAAPKATVAYFFRGWADKSPPDQQREGCLLKQHVAARSAXXXXXXXXXXXXXXXSLKRAPSPTPPPAVFSALGLVAARCKGLERLATQEVTYVGKQLRIGRTTEGDV 509
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig84.16541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LQ05_ECTSI3.350e-29087.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 51..208
e-value: 1.2E-5
score: 26.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 64..172
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..522
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.803

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig84contigE-siliculosus-1a_M_contig84:390487..393713 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig84.16541.1mRNA_E-siliculosus-1a_M_contig84.16541.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig84 389997..394954 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig84.16541.1 ID=prot_E-siliculosus-1a_M_contig84.16541.1|Name=mRNA_E-siliculosus-1a_M_contig84.16541.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=523bp
MPSSLFGTVMLLAGASLTQAWVSPPAHQPRSPGAAGGAGAPSTGASPRFG
RSSLSPRSKPLTRWDAQLERARSAHRVKDWTEVQHWCSRVIDLADDWNAV
EQAHLRLALAAQKSSGVAGGRRAFQQGIRDCPSSDTLLVAWALMESKIKN
SAHSRRRAWALIRRAIALNPNKNRRVLSWSVFAADLALAEAAGGRAAVVE
AVRSALSPPTPPLPLLPEPTAAGGKAIGGAAGAAGGVSTRAHKREEETIL
ATKLLDLCHSNKGFQDAPDVPPAATAAVPAAAPATTAASAAPSERFQELA
GELERKGGGAGAGVRALSGTWRLVFTTSADCNRYLSRTGNEVYQRLTPPI
MAIKPRPSCKQPAPFRCEVLLRPAAPTTATGGGTADASYETPPLSPPSHG
TKAAPKATVAYFFRGWADKSPPDQQREGCLLRQHVAARSATVVAGGETSA
GSPKRAPSPTPPPVVFSALGLVAARCKGLERLATQEVTYVGKQLRIGRTA
EGDVYVYERCAWPKDMDFGLVV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf