prot_E-siliculosus-1a_M_contig83.16509.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16509.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16509.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length225
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: A0A6H5LGD3_9PHAE (TAFII28 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGD3_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 2.770e-124
Identity = 206/224 (91.96%), Postives = 210/224 (93.75%), Query Frame = 0
Query:    1 MDGDGDILGMRRRPEPAQPAEPTTAVAGNSAAVXXXXXXXXXXXARHTAGASPLKRQRSLAAGAAARAEGQVVEGVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEARETLARDGRGPPLRSPTTRDRGLAGVRGRSGGGGSFLGGPGVLTRGNPI 224
            MDGDGDILGMRRRPEPAQPAEPTTA AGN    XXXXXXXXXXX    AGASPLKR+RSLAAGAA RAE QVVE VAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIE GQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLL+ARETLARDGRGPPLRSPTTRDRGLAGV+GR+GGGGS LGGPGVLTRGNPI
Sbjct:    1 MDGDGDILGMRRRPEPAQPAEPTTASAGNPXXXXXXXXXXXXXXXXXXAGASPLKRKRSLAAGAATRAEFQVVESVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIESGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLKARETLARDGRGPPLRSPTTRDRGLAGVQGRNGGGGSLLGGPGVLTRGNPI 224          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: D7FZG3_ECTSI (TAFII28 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG3_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 8.140e-74
Identity = 138/153 (90.20%), Postives = 138/153 (90.20%), Query Frame = 0
Query:    1 MDGDGDILGMRRRPEPAQPAEPTTAVAGNSAAVXXXXXXXXXXXARHTAGASPLKRQRSLAAGAAARAEGQVVEGVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEE 153
            MDGDGDILGMRRRPEPA PAE            XXXXXXXXXXX RH AGASPLKRQRSLAAGAAARAEGQVVEGVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEE
Sbjct:    1 MDGDGDILGMRRRPEPAPPAEXXXXXXXXXXXXXXXXXXXXXXXXRHAAGASPLKRQRSLAAGAAARAEGQVVEGVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEE 153          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: UPI00053C30E2 (transcription initiation factor TFIID subunit 11-like n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C30E2)

HSP 1 Score: 60.5 bits (145), Expect = 1.280e-7
Identity = 37/103 (35.92%), Postives = 58/103 (56.31%), Query Frame = 0
Query:   84 QLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEARETLARDGRGP 186
            Q   +Q+ RY+++ RS F+R+ ++ L+          SI G Q    +    TI + S+AK FVGDLVE+A+    ER D+GP++P  + EA   L  +G+ P
Sbjct:  110 QFTGDQMNRYESYRRSAFQRSSMKRLLT---------SITGTQ---TINLQITIVMCSIAKMFVGDLVEKARTVMGERKDSGPIRPCHIREAYRRLKLEGKVP 200          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: A0A7S0Q4X8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4X8_9EUKA)

HSP 1 Score: 58.5 bits (140), Expect = 2.310e-7
Identity = 37/96 (38.54%), Postives = 48/96 (50.00%), Query Frame = 0
Query:   88 EQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEARETLARDG 183
            EQL R++ + RS+F RA +R L+ D                G   E S I +AS+AK FVGDLVE A  A    G+ GP++P  L  A     R G
Sbjct:   45 EQLARFEQYKRSKFPRAAMRRLMADVV--------------GSSTERSAIILASIAKMFVGDLVESAVEAMAAAGETGPVRPHHLRNAHHKAKRAG 126          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: UPI001745F140 (transcription initiation factor TFIID subunit 11-like n=4 Tax=Molossus molossus TaxID=27622 RepID=UPI001745F140)

HSP 1 Score: 59.3 bits (142), Expect = 5.200e-7
Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 0
Query:   55 KRQRSLAAGAAARAEGQVVEGVAGEVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEARETLARDGRGP 186
            KRQ+  A G   R + +V E  A ++ +  L+ EQL RY+ + RS F RA +  L+   A+ +             V +T+ IA+A +AK FVG++VEEA     + G+A PL+P  L EA   L+  G+ P
Sbjct:  125 KRQKRDAKGKKER-KWKVDEADAQKMKLLMLSEEQLNRYEVYRRSAFPRAAVNRLMRSAASTS-------------VPQTAVIAMAGLAKVFVGEVVEEALDVCEKWGEAPPLQPKHLREAVRRLSSKGKIP 242          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: A0A267F1M2_9PLAT (TAFII28 domain-containing protein (Fragment) n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267F1M2_9PLAT)

HSP 1 Score: 57.4 bits (137), Expect = 1.110e-6
Identity = 33/100 (33.00%), Postives = 52/100 (52.00%), Query Frame = 0
Query:   82 VDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEARETLAR 181
            +   + EQL R++ + R+ F +A ++ LI   +            G   V +   IAVA +AK +VG++VEEA   +   GD GPL+P  + EA   L+R
Sbjct:   78 ISHFSEEQLNRFEKYRRAAFAKASVKRLITQAS------------GVSQVSQNVVIAVAGIAKVYVGEIVEEALNVRQRLGDVGPLQPRHIREAERLLSR 165          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: E9G9U8_DAPPU (TAFII28 domain-containing protein n=5 Tax=Daphnia TaxID=6668 RepID=E9G9U8_DAPPU)

HSP 1 Score: 55.5 bits (132), Expect = 1.320e-6
Identity = 36/97 (37.11%), Postives = 53/97 (54.64%), Query Frame = 0
Query:   79 EVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEA 175
            +V V     EQL RY+ + RS F +A I+ L+         ++I G      + +   IA+A +AK FVG++VEEA     + GD+GPL+P  L EA
Sbjct:    2 QVLVSNFTEEQLDRYEMYRRSAFPKAAIKRLM---------QTITGCS----ISQNVVIAMAGIAKVFVGEVVEEALDVMEQWGDSGPLQPKHLREA 85          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: E9G9V1_DAPPU (TAFII28 domain-containing protein n=1 Tax=Daphnia pulex TaxID=6669 RepID=E9G9V1_DAPPU)

HSP 1 Score: 55.5 bits (132), Expect = 1.320e-6
Identity = 36/97 (37.11%), Postives = 53/97 (54.64%), Query Frame = 0
Query:   79 EVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEA 175
            +V V     EQL RY+ + RS F +A I+ L+         ++I G      + +   IA+A +AK FVG++VEEA     + GD+GPL+P  L EA
Sbjct:    2 QVLVSNFTEEQLDRYEMYRRSAFPKAAIKRLM---------QTITGCS----ISQNVVIAMAGIAKVFVGEVVEEALDVMEQWGDSGPLQPKHLREA 85          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: UPI000C253B1F (transcription initiation factor TFIID subunit 11 n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C253B1F)

HSP 1 Score: 57.4 bits (137), Expect = 1.840e-6
Identity = 37/105 (35.24%), Postives = 55/105 (52.38%), Query Frame = 0
Query:   79 EVPVDQLNPEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEARETLARDG 183
            +V V     +QL RY+ + RS F +A I+ L+         ++I G      V +   IA+A +AK FVG++VEE      E GD GP++P  L EA   + +DG
Sbjct:  115 QVLVSNFTEDQLDRYEMYRRSAFPKAAIKRLM---------QTITGCS----VSQNVVIAMAGIAKVFVGEVVEEGLDVMEETGDTGPIQPKHLREAVRRMRKDG 206          
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Match: A0A7S3FEL7_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FEL7_9EUKA)

HSP 1 Score: 56.6 bits (135), Expect = 1.950e-6
Identity = 33/97 (34.02%), Postives = 50/97 (51.55%), Query Frame = 0
Query:   87 PEQLQRYKAWVRSRFERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDLVEEAKRAQLERGDAGPLKPSDLLEARETLARDG 183
            PEQLQR+  + RS+F R  +  L+ +                G   + S I +AS+AK FVG++VE A+      G++GP++P  L +A  TL   G
Sbjct:   74 PEQLQRFDHYKRSKFPRVAMNRLMKETV--------------GHSSQKSAIVLASLAKMFVGEMVETAREQMTSVGESGPIQPHRLRQAYRTLQNSG 156          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LGD3_9PHAE2.770e-12491.96TAFII28 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FZG3_ECTSI8.140e-7490.20TAFII28 domain-containing protein n=1 Tax=Ectocarp... [more]
UPI00053C30E21.280e-735.92transcription initiation factor TFIID subunit 11-l... [more]
A0A7S0Q4X8_9EUKA2.310e-738.54Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
UPI001745F1405.200e-735.61transcription initiation factor TFIID subunit 11-l... [more]
A0A267F1M2_9PLAT1.110e-633.00TAFII28 domain-containing protein (Fragment) n=1 T... [more]
E9G9U8_DAPPU1.320e-637.11TAFII28 domain-containing protein n=5 Tax=Daphnia ... [more]
E9G9V1_DAPPU1.320e-637.11TAFII28 domain-containing protein n=1 Tax=Daphnia ... [more]
UPI000C253B1F1.840e-635.24transcription initiation factor TFIID subunit 11 n... [more]
A0A7S3FEL7_9EUKA1.950e-634.02Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 85..186
e-value: 4.8E-16
score: 60.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 86..183
IPR006809TAFII28-like proteinPFAMPF04719TAFII28coord: 82..176
e-value: 9.7E-18
score: 64.1
NoneNo IPR availablePANTHERPTHR13218FAMILY NOT NAMEDcoord: 69..189

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:648642..653452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16509.1mRNA_E-siliculosus-1a_M_contig83.16509.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 648528..653989 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16509.1 ID=prot_E-siliculosus-1a_M_contig83.16509.1|Name=mRNA_E-siliculosus-1a_M_contig83.16509.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=225bp
MDGDGDILGMRRRPEPAQPAEPTTAVAGNSAAVADAAPAAAAAAARHTAG
ASPLKRQRSLAAGAAARAEGQVVEGVAGEVPVDQLNPEQLQRYKAWVRSR
FERAPIRELILDQAAPTLVRSIEGGQGRGVVQETSTIAVASMAKQFVGDL
VEEAKRAQLERGDAGPLKPSDLLEARETLARDGRGPPLRSPTTRDRGLAG
VRGRSGGGGSFLGGPGVLTRGNPI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006809TAFII28
IPR009072Histone-fold