mRNA_E-siliculosus-1a_M_contig83.16507.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig83.16507.1 vs. uniprot
Match: A0A6H5KA41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA41_9PHAE) HSP 1 Score: 615 bits (1586), Expect = 2.050e-220 Identity = 334/374 (89.30%), Postives = 341/374 (91.18%), Query Frame = 1
Query: 1 MIFFKPNKEVAVVACALLPLAVGFTFRPVSAFSAAVRPTALRSATHPAAFFSAHSSRPAAARPCRRRTAAECCDVLPVSNMVMSAAAGAEAGGRNGGPAEEGRAVVAPGRAKKKVIKSAGVALAWYLASSAVAVAATAATGGAVRARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVDFIVFCFFSRWVGFPFKELFSPQRIAHLQTPDFWVATTLAGAFGFAIVTWTRRVGQGYLRSVCASAFSPAMHRLVVRPAKAVASVAGMGDGWDLGLTDEQRKARRPSIELRRSLSTFKDPDFHGDGGIGDSGGAAFPQAPPPAAAAGVDDGAPPDLKRSS 1122
MIFFK KEVAVVA LL LAVGFTFRP SAFSAAVRPTALRSATHPAAFFSAHSS PAAARPCRRRTAAECC+VLP+SNMV + +EEG+AVVAPGRAKK VIKSAGVALAWYLASSAVA+AATAATGGA RARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVD IVF F SRWVGFPFKEL S QRIAHLQTPDFWVATTLAGAFGFAIVTWTRRVGQGYLRSVCASA SPAMHRL+VRPAKAVASVAGMGDGWDLGLTDEQRKARRPSIELRRSLSTFKDPDFHGDGGIGDSGGAAFPQAP P AAGVDDGAPPDLKRSS
Sbjct: 1 MIFFK-RKEVAVVASTLL-LAVGFTFRPASAFSAAVRPTALRSATHPAAFFSAHSSSPAAARPCRRRTAAECCNVLPMSNMVXXXXXXXXXXXXS---SEEGKAVVAPGRAKK-VIKSAGVALAWYLASSAVALAATAATGGAARARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVDCIVFFFLSRWVGFPFKELVSAQRIAHLQTPDFWVATTLAGAFGFAIVTWTRRVGQGYLRSVCASALSPAMHRLLVRPAKAVASVAGMGDGWDLGLTDEQRKARRPSIELRRSLSTFKDPDFHGDGGIGDSGGAAFPQAPSPPPAAGVDDGAPPDLKRSS 368 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_M_contig83.16507.1 >prot_E-siliculosus-1a_M_contig83.16507.1 ID=prot_E-siliculosus-1a_M_contig83.16507.1|Name=mRNA_E-siliculosus-1a_M_contig83.16507.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=375bp MIFFKPNKEVAVVACALLPLAVGFTFRPVSAFSAAVRPTALRSATHPAAFback to top mRNA from alignment at E-siliculosus-1a_M_contig83:642794..648250- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_M_contig83.16507.1 ID=mRNA_E-siliculosus-1a_M_contig83.16507.1|Name=mRNA_E-siliculosus-1a_M_contig83.16507.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=5457bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:642794..648250- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig83:642794..648250- >mRNA_E-siliculosus-1a_M_contig83.16507.1 ID=mRNA_E-siliculosus-1a_M_contig83.16507.1|Name=mRNA_E-siliculosus-1a_M_contig83.16507.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2250bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig83:642794..648250- (Ectocarpus siliculosus Ec864m_EcPH12_78m male)back to top |