prot_E-siliculosus-1a_M_contig83.16507.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig83.16507.1
Unique Nameprot_E-siliculosus-1a_M_contig83.16507.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length375
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig83.16507.1 vs. uniprot
Match: A0A6H5KA41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA41_9PHAE)

HSP 1 Score: 615 bits (1586), Expect = 2.050e-220
Identity = 334/374 (89.30%), Postives = 341/374 (91.18%), Query Frame = 0 
Query:    1 MIFFKPNKEVAVVACALLPLAVGFTFRPVSAFSAAVRPTALRSATHPAAFFSAHSSRPAAARPCRRRTAAECCDVLPVSNMVMSAAAGAEAGGRNGGPAEEGRAVVAPGRAKKKVIKSAGVALAWYLASSAVAVAATAATGGAVRARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVDFIVFCFFSRWVGFPFKELFSPQRIAHLQTPDFWVATTLAGAFGFAIVTWTRRVGQGYLRSVCASAFSPAMHRLVVRPAKAVASVAGMGDGWDLGLTDEQRKARRPSIELRRSLSTFKDPDFHGDGGIGDSGGAAFPQAPPPAAAAGVDDGAPPDLKRSS 374
            MIFFK  KEVAVVA  LL LAVGFTFRP SAFSAAVRPTALRSATHPAAFFSAHSS PAAARPCRRRTAAECC+VLP+SNMV            +   +EEG+AVVAPGRAKK VIKSAGVALAWYLASSAVA+AATAATGGA RARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVD IVF F SRWVGFPFKEL S QRIAHLQTPDFWVATTLAGAFGFAIVTWTRRVGQGYLRSVCASA SPAMHRL+VRPAKAVASVAGMGDGWDLGLTDEQRKARRPSIELRRSLSTFKDPDFHGDGGIGDSGGAAFPQAP P  AAGVDDGAPPDLKRSS
Sbjct:    1 MIFFK-RKEVAVVASTLL-LAVGFTFRPASAFSAAVRPTALRSATHPAAFFSAHSSSPAAARPCRRRTAAECCNVLPMSNMVXXXXXXXXXXXXS---SEEGKAVVAPGRAKK-VIKSAGVALAWYLASSAVALAATAATGGAARARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVDCIVFFFLSRWVGFPFKELVSAQRIAHLQTPDFWVATTLAGAFGFAIVTWTRRVGQGYLRSVCASALSPAMHRLLVRPAKAVASVAGMGDGWDLGLTDEQRKARRPSIELRRSLSTFKDPDFHGDGGIGDSGGAAFPQAPSPPPAAGVDDGAPPDLKRSS 368
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig83.16507.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KA41_9PHAE2.050e-22089.30Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 228..246
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 266..374
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..122
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..207
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..144
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 208..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 247..264
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 206..228

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig83contigE-siliculosus-1a_M_contig83:642794..648250 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig83.16507.1mRNA_E-siliculosus-1a_M_contig83.16507.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig83 642794..648250 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig83.16507.1 ID=prot_E-siliculosus-1a_M_contig83.16507.1|Name=mRNA_E-siliculosus-1a_M_contig83.16507.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=375bp
MIFFKPNKEVAVVACALLPLAVGFTFRPVSAFSAAVRPTALRSATHPAAF
FSAHSSRPAAARPCRRRTAAECCDVLPVSNMVMSAAAGAEAGGRNGGPAE
EGRAVVAPGRAKKKVIKSAGVALAWYLASSAVAVAATAATGGAVRARPQP
RMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAM
SWGKPAGLMAYTSVDFIVFCFFSRWVGFPFKELFSPQRIAHLQTPDFWVA
TTLAGAFGFAIVTWTRRVGQGYLRSVCASAFSPAMHRLVVRPAKAVASVA
GMGDGWDLGLTDEQRKARRPSIELRRSLSTFKDPDFHGDGGIGDSGGAAF
PQAPPPAAAAGVDDGAPPDLKRSS*
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