prot_E-siliculosus-1a_F_contig1048.345.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1048.345.1
Unique Nameprot_E-siliculosus-1a_F_contig1048.345.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length394
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1048.345.1 vs. uniprot
Match: D8LDX6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX6_ECTSI)

HSP 1 Score: 709 bits (1831), Expect = 1.600e-254
Identity = 375/393 (95.42%), Postives = 383/393 (97.46%), Query Frame = 0 
Query:    1 MRSRETTQLSLISTRAMANREMRTCKAERDRAFAELVYGRLFTRTGGIVRTWTAIIANIKRLLFLQGAVERAARQHLLEANMNRMAIVTRFMSQMALKRRRNRAVKILIGALSAFTNSNAIGRYAQRVKWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLHPPVPVPLMTTAMLLRPPSKASLPPSRPGTAETTPATSTSPSSNKRPNRRKGAGGQGGQKKGRARPKRQKSVVGREKKVENDTGGGGGQGSAGATLASTVPETAESNSAPPENASQPRRPPVYVSSEARHREIFSWLQRTRAKHCRDVINYERFTIFPCMVELLLQHERRTYGTRLQAVKHVIALRSFGRLSRVWTEGGYFSKMSHVLPPPPRMPRVFTPEEGDEMFDRAAAR 393
            MRSRETTQLSLISTRAMANREMRTCKAERDRAFAELV+GRLFTRTGGIVRTWTAIIANIKRLLFLQGAVERAARQHLLEANMNRMAIVTRFMSQMALKRRRNRAVKI+IGALSAFTNSNAIGRYAQRV WGTRHLQAVVRRRMACMTSHLTLLNRHWDRL+PPVP+PLMTTAML RPPSKASLPPSRPGTAETTPATS SPSSNKRPNRRKGAGGQGGQKKGR RPKRQKSVVGREKKVENDTGGGGGQGSA ATLASTVPETA+S SAPP+NA QPRRPPVYVSSEA+HREI SWLQRTRAKHCRDVINYERFTIFPCMVELLLQHERRTYGTRLQAVKHVIALRSFGRLSRVWTEGGYF+KMSHVLPPP RMPRVFTPEEGDEM DRAAAR
Sbjct:   85 MRSRETTQLSLISTRAMANREMRTCKAERDRAFAELVHGRLFTRTGGIVRTWTAIIANIKRLLFLQGAVERAARQHLLEANMNRMAIVTRFMSQMALKRRRNRAVKIIIGALSAFTNSNAIGRYAQRVNWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTTAML-RPPSKASLPPSRPGTAETTPATSNSPSSNKRPNRRKGAGGQGGQKKGRTRPKRQKSVVGREKKVENDTGGGGGQGSARATLASTVPETADSTSAPPKNALQPRRPPVYVSSEAKHREILSWLQRTRAKHCRDVINYERFTIFPCMVELLLQHERRTYGTRLQAVKHVIALRSFGRLSRVWTEGGYFAKMSHVLPPPSRMPRVFTPEEGDEMLDRAAAR 476
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1048.345.1 vs. uniprot
Match: A0A6H5L2P4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2P4_9PHAE)

HSP 1 Score: 664 bits (1714), Expect = 1.490e-238
Identity = 359/432 (83.10%), Postives = 377/432 (87.27%), Query Frame = 0 
Query:    1 MRSRETTQLSLISTRAMANREMRTCKAERDRAFAELVYGRLFTRTGGIVRTWTAIIANIKRLLFL------------------------QGAVERAARQHLLEANMNRMAIVTRFMSQMALKRRRNRAVKILIGALSAFTNSNAIGRYAQRVKWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLHPPVPVPLMTTAMLLRPPSKASLPPSRPGTAETTPATSTSPSSNKRPNRRKGAGGQGGQKKGRARPKRQKSVVGREKKVENDTGGGGGQGSAGATLASTVPETAESNSAPPENASQPRRPPVYVSSEARHREIFSWLQRTRAKHCRDVINYERFT---------------IFPCMVELLLQHERRTYGTRLQAVKHVIALRSFGRLSRVWTEGGYFSKMSHVLPPPPRMPRVFTPEEGDEMFDRAAAR 393
            MRSRETTQL LIST+A+ANREMRTCKAERDRAFAELVYGRLFTRTGGIVRTWTAIIANIKRLLFL                        QGAVERAARQHLLEANMNRMAIVTRF+ QMALKRRRNRAVKILIGALSAFT+S+AIGRYAQRV WGTRHLQAVVRRRMACMTSHLTLLNRHWDRL+PPVP+PLMTT M LRPPS+ASLPPS+PGTA+TTPATSTSPSSNKRPNRRKGAGGQGG KKGR RPKRQKSVVGR+K+ +ND GGGGGQGSAGAT ASTVPETAESNSAP E A Q RRPPVYVSSEA+HREIFSWLQRTRAKHCRD+INYERFT               IFPCMVELLLQHERRTYGTRLQAV+HVI LRSFGRLSRVWTEGGYF+KMSH LPPPPRMPRVFTPEEGDEMFDRAA+R
Sbjct:    1 MRSRETTQLFLISTKALANREMRTCKAERDRAFAELVYGRLFTRTGGIVRTWTAIIANIKRLLFLMPHIVHGADDNDISICLRSYDIVQQGAVERAARQHLLEANMNRMAIVTRFIGQMALKRRRNRAVKILIGALSAFTSSSAIGRYAQRVNWGTRHLQAVVRRRMACMTSHLTLLNRHWDRLYPPVPLPLMTTGMPLRPPSEASLPPSQPGTAKTTPATSTSPSSNKRPNRRKGAGGQGGPKKGRTRPKRQKSVVGRKKQFQNDAGGGGGQGSAGATHASTVPETAESNSAPRETAPQRRRPPVYVSSEAKHREIFSWLQRTRAKHCRDIINYERFTPFSSLELPLNLKRTKIFPCMVELLLQHERRTYGTRLQAVRHVITLRSFGRLSRVWTEGGYFAKMSHALPPPPRMPRVFTPEEGDEMFDRAASR 432
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1048.345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LDX6_ECTSI1.600e-25495.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L2P4_9PHAE1.490e-23883.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1048contigE-siliculosus-1a_F_contig1048:31614..34003 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1048.345.1mRNA_E-siliculosus-1a_F_contig1048.345.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1048 30185..34219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1048.345.1 ID=prot_E-siliculosus-1a_F_contig1048.345.1|Name=mRNA_E-siliculosus-1a_F_contig1048.345.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=394bp
MRSRETTQLSLISTRAMANREMRTCKAERDRAFAELVYGRLFTRTGGIVR
TWTAIIANIKRLLFLQGAVERAARQHLLEANMNRMAIVTRFMSQMALKRR
RNRAVKILIGALSAFTNSNAIGRYAQRVKWGTRHLQAVVRRRMACMTSHL
TLLNRHWDRLHPPVPVPLMTTAMLLRPPSKASLPPSRPGTAETTPATSTS
PSSNKRPNRRKGAGGQGGQKKGRARPKRQKSVVGREKKVENDTGGGGGQG
SAGATLASTVPETAESNSAPPENASQPRRPPVYVSSEARHREIFSWLQRT
RAKHCRDVINYERFTIFPCMVELLLQHERRTYGTRLQAVKHVIALRSFGR
LSRVWTEGGYFSKMSHVLPPPPRMPRVFTPEEGDEMFDRAAAR*
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