prot_E-siliculosus-1a_M_contig81.16345.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig81.16345.1
Unique Nameprot_E-siliculosus-1a_M_contig81.16345.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length121
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig81.16345.1 vs. uniprot
Match: A0A6H5LBM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBM3_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.600e-6
Identity = 21/40 (52.50%), Postives = 26/40 (65.00%), Query Frame = 0 
Query:    1 MVDVRN-KLCDHPGCPKHPSFGIDGTRKPEFCGTHRKQGM 39
            MVD+ N + C H  C KHP++G+ GTRK EFC  H   GM
Sbjct:    8 MVDIHNIRRCAHEDCVKHPTYGVPGTRKAEFCAPHALDGM 47
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BLAST of mRNA_E-siliculosus-1a_M_contig81.16345.1 vs. uniprot
Match: D8LCI2_ECTSI (EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 1.580e-5
Identity = 19/31 (61.29%), Postives = 23/31 (74.19%), Query Frame = 0 
Query:    9 CDHPGCPKHPSFGIDGTRKPEFCGTHRKQGM 39
            C HPGC KH S+G+ GT++ EFCG H K GM
Sbjct:    6 CGHPGCGKHSSYGVKGTKEREFCGRHAKMGM 36
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig81.16345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LBM3_9PHAE1.600e-652.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCI2_ECTSI1.580e-561.29EsV-1-7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCI2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig81contigE-siliculosus-1a_M_contig81:530691..531053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig81.16345.1mRNA_E-siliculosus-1a_M_contig81.16345.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig81 528839..531084 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig81.16345.1 ID=prot_E-siliculosus-1a_M_contig81.16345.1|Name=mRNA_E-siliculosus-1a_M_contig81.16345.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=121bp
MVDVRNKLCDHPGCPKHPSFGIDGTRKPEFCGTHRKQGMVDVIGKKCNHP
GCIKFPSHGKDGSYTREFCSQHAKKGMVVIKRCVHPGCARHAVFGMVGSK
KRDFCQSHAKPGMVRFGRAN*
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