prot_E-siliculosus-1a_F_contig1599.3434.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1599.3434.1
Unique Nameprot_E-siliculosus-1a_F_contig1599.3434.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length456
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1599.3434.1 vs. uniprot
Match: D7G3J9_ECTSI (Cyclic nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3J9_ECTSI)

HSP 1 Score: 746 bits (1927), Expect = 1.070e-269
Identity = 405/445 (91.01%), Postives = 413/445 (92.81%), Query Frame = 0 
Query:    1 MSVTFAHEGDDACWACNDPSFSYFLVSGSLAPVDIIPNRLSASLLTPIPLRYAGTSDSLKHTLSVELTASEAQLRQDRCEHSARLEAQESNAEKRTAGGVHHPAVYGVHIPGTARSSGDKSRSTAGSTWSPMAPRKDXXXXXXXXXXXXXXXXXXXXXXXXSIHRATTPSEVNASDVDCSSNEGEETPPLLPGQSLDCYLLLHRVKIVGQESDPDKPVSPEVVPAAAERATGTTRWKLDARQGSCIGRLFGKGFSAAALERVALLMERREEPEAAVVRRKGSAVDKVLLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFFTIPAEAFLRAIDGVWTEPLYRLRSRARVVGHGCRADSAGQARPLTAAGIGGERSLPRNWSSNDALLNLTKSRTRPSPVMLTPVPLFSGIQGGSGLEERRD 445
            MSVTFAHEGDDA WAC DPSFSYFLVSGSLAP++IIPNRLSA+LLTP PL Y GTSDSLKHTLSVELTASEAQLRQDR EHSARLEAQES  EK TAGGVHHPAVYGV IPGTARSSGDKSRSTAGSTWSP+APRKD       XXXXXXXXXXXXXXXXX   RATTPSEVNASDVD SSNEGEET PLLPGQSLDCYLLLHRVKIV  ESDPDKPVS EVVPAA ERATGTTRWKL+ARQGSCIGR+FGKGFSAAALE+VALLMERREEP AAVVRRKGSAVDKVLLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFF IPAEAFLRAIDGVWTEPLYRLRSRARVVGHGCRADSAGQ RPLTAAGIGGERSLPRNWSSNDAL NLTKSRTRP PVMLTPVPLFSGIQGGSGLEER +
Sbjct:    1 MSVTFAHEGDDASWACTDPSFSYFLVSGSLAPMEIIPNRLSATLLTPTPLHYVGTSDSLKHTLSVELTASEAQLRQDRGEHSARLEAQESKPEKGTAGGVHHPAVYGVQIPGTARSSGDKSRSTAGSTWSPVAPRKDGGLTSEHXXXXXXXXXXXXXXXXXXXXRATTPSEVNASDVDFSSNEGEETLPLLPGQSLDCYLLLHRVKIVDPESDPDKPVSLEVVPAAVERATGTTRWKLEARQGSCIGRVFGKGFSAAALEQVALLMERREEPAAAVVRRKGSAVDKVLLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFFAIPAEAFLRAIDGVWTEPLYRLRSRARVVGHGCRADSAGQERPLTAAGIGGERSLPRNWSSNDALPNLTKSRTRPPPVMLTPVPLFSGIQGGSGLEEREN 445
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BLAST of mRNA_E-siliculosus-1a_F_contig1599.3434.1 vs. uniprot
Match: A0A6H5L8E9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8E9_9PHAE)

HSP 1 Score: 426 bits (1095), Expect = 3.110e-145
Identity = 229/316 (72.47%), Postives = 242/316 (76.58%), Query Frame = 0 
Query:    1 MSVTFAHEGDDACWACNDPSFSYFLVSGSLAPVDIIPNRLSASLLTPIPLRYAGTSDSLKHTLSVELTASEAQLRQDRCEHSARLEAQESNAEKRTAGGVHHPAVYGVHIPGTARSSGDKSRSTAGSTWSPMAPRKDXXXXXXXXXXXXXXXXXXXXXXXXSIHRATTPSEVNASDVDCSSNEGEETPPLLPGQSLDCYLLLHRVKIVGQESDPDKPVSPEVVPAAAERATGTTRWKLDARQGSCIGRL-----------------------------FGKGFSAAALERVALLMERREEPEAAVVRRKGSAVDKV 287
            MSVTFAHEG DACWACNDPSFSYFLVSGSLAPV IIPNRLSASL  P PLRYAGTS+SLKHTL VELTASEAQLRQDRCEHSARLEA ESNAEK TAGGVHHPAVYGV IPGTARS GDKS STAGSTWSP+APRKD                        S+ +AT PSE+NAS+VD S+NEG ETP LLPGQSLDCYLLLHRVK++G E DPDK VSPEVVPAAAER TGTTRWKLDARQGSCIG++                             FGKGFSAAALE+VALLMERR+EP AAVVRRKGSAVDKV
Sbjct:    1 MSVTFAHEGYDACWACNDPSFSYFLVSGSLAPVKIIPNRLSASLQNPTPLRYAGTSNSLKHTLGVELTASEAQLRQDRCEHSARLEAHESNAEKGTAGGVHHPAVYGVQIPGTARSPGDKSSSTAGSTWSPVAPRKDGGLTSDHGGGGGSDIESTPGGGIFSVLKATKPSEINASEVDFSTNEGRETPLLLPGQSLDCYLLLHRVKVIGPERDPDKAVSPEVVPAAAERVTGTTRWKLDARQGSCIGKVSRRFLRELEREEAKHETEVKVSFLRQTEVFGKGFSAAALEQVALLMERRKEPAAAVVRRKGSAVDKV 316
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BLAST of mRNA_E-siliculosus-1a_F_contig1599.3434.1 vs. uniprot
Match: A0A6H5JRR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRR7_9PHAE)

HSP 1 Score: 301 bits (770), Expect = 2.120e-98
Identity = 150/158 (94.94%), Postives = 152/158 (96.20%), Query Frame = 0 
Query:  286 KVLLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFFTIPAEAFLRAIDGVWTEPLYRLRSRARVVGHGCRADSAGQARPLTAAGIGGERSLPRNWSSNDALLNLTKSRTRPSPVMLTPVPLFSGIQGGSGLEER 443
            +VLLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFF IPAEAFLRAIDGVWTEPLYRLRSR RVVG GCRADSAGQARPLTAAGI GERSLPRNWSSNDAL NLTKSRTRP PVMLTP+PLFSGIQGGSGLEER
Sbjct:    4 QVLLVESGEAVRLGDPRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFFAIPAEAFLRAIDGVWTEPLYRLRSRVRVVGDGCRADSAGQARPLTAAGIDGERSLPRNWSSNDALPNLTKSRTRPPPVMLTPIPLFSGIQGGSGLEER 161
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1599.3434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G3J9_ECTSI1.070e-26991.01Cyclic nucleotide-binding domain-containing protei... [more]
A0A6H5L8E9_9PHAE3.110e-14572.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRR7_9PHAE2.120e-9894.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014710RmlC-like jelly roll foldGENE3D2.60.120.10coord: 248..362
e-value: 2.7E-9
score: 38.7
IPR000595Cyclic nucleotide-binding domainPROSITEPS50042CNMP_BINDING_3coord: 250..356
score: 7.402
IPR018490Cyclic nucleotide-binding-likeSUPERFAMILY51206cAMP-binding domain-likecoord: 252..357

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1599contigE-siliculosus-1a_F_contig1599:21336..25861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1599.3434.1mRNA_E-siliculosus-1a_F_contig1599.3434.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1599 21174..25861 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1599.3434.1 ID=prot_E-siliculosus-1a_F_contig1599.3434.1|Name=mRNA_E-siliculosus-1a_F_contig1599.3434.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=456bp
MSVTFAHEGDDACWACNDPSFSYFLVSGSLAPVDIIPNRLSASLLTPIPL
RYAGTSDSLKHTLSVELTASEAQLRQDRCEHSARLEAQESNAEKRTAGGV
HHPAVYGVHIPGTARSSGDKSRSTAGSTWSPMAPRKDGGLTSEHGGGGGS
DIESTLDGGIFSIHRATTPSEVNASDVDCSSNEGEETPPLLPGQSLDCYL
LLHRVKIVGQESDPDKPVSPEVVPAAAERATGTTRWKLDARQGSCIGRLF
GKGFSAAALERVALLMERREEPEAAVVRRKGSAVDKVLLVESGEAVRLGD
PRENTIRNYSSLRIRAGQLFGAEEALSGLPSYTCNLTATCPLQFFTIPAE
AFLRAIDGVWTEPLYRLRSRARVVGHGCRADSAGQARPLTAAGIGGERSL
PRNWSSNDALLNLTKSRTRPSPVMLTPVPLFSGIQGGSGLEERRDDIGFL
LQPEK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018490cNMP-bd-like
IPR000595cNMP-bd_dom
IPR014710RmlC-like_jellyroll