mRNA_E-siliculosus-1a_M_contig8.16202.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16202.1
Unique NamemRNA_E-siliculosus-1a_M_contig8.16202.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_M_contig8.16202.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.100e-5
Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 1 
Query:  571 ASGTTCSNGLAGVEDPLGKVCCAPSCPQCAGGGCGGFDGAL---CCETNVTASSIYCDVAQEAPCILGD 768
            ASGTTCSNGL+G+E   G VCC   C  C G GCG   G     CC + +   +  C V +EAPC++ +
Sbjct:   19 ASGTTCSNGLSGLEK--GGVCCPVECGTCGGTGCGSRPGLTKYDCCTSTIKEDNHLCSVTKEAPCVIDE 85
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16202.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JNF5_9PHAE1.100e-544.93MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1950657..1956831 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1191
Model size2172
Exons7
Hectar predicted targeting categorysignal peptide
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGs2CYCX@1,2S3MN@2759
EggNOG free text desc.Glycosyl Hydrolase Family 88
Seed eggNOG ortholog2880.D7FUJ9
Seed ortholog evalue1.7e-08
Seed ortholog score67.4
Taxonomic scopeEukaryota
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936199.0102618-UTR-E-siliculosus-1a_M_contig8:1950656..19508181622936199.0102618-UTR-E-siliculosus-1a_M_contig8:1950656..1950818Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1950657..1950818 +
1696250973.9140513-UTR-E-siliculosus-1a_M_contig8:1950656..19508181696250973.9140513-UTR-E-siliculosus-1a_M_contig8:1950656..1950818Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1950657..1950818 +
1622936199.0256865-UTR-E-siliculosus-1a_M_contig8:1950904..19511521622936199.0256865-UTR-E-siliculosus-1a_M_contig8:1950904..1951152Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1950905..1951152 +
1696250973.9298306-UTR-E-siliculosus-1a_M_contig8:1950904..19511521696250973.9298306-UTR-E-siliculosus-1a_M_contig8:1950904..1951152Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1950905..1951152 +
1622936199.0465512-UTR-E-siliculosus-1a_M_contig8:1952058..19520771622936199.0465512-UTR-E-siliculosus-1a_M_contig8:1952058..1952077Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1952059..1952077 +
1696250973.9394891-UTR-E-siliculosus-1a_M_contig8:1952058..19520771696250973.9394891-UTR-E-siliculosus-1a_M_contig8:1952058..1952077Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1952059..1952077 +
1622936199.1582863-UTR-E-siliculosus-1a_M_contig8:1956279..19568311622936199.1582863-UTR-E-siliculosus-1a_M_contig8:1956279..1956831Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1956280..1956831 +
1696250974.0149581-UTR-E-siliculosus-1a_M_contig8:1956279..19568311696250974.0149581-UTR-E-siliculosus-1a_M_contig8:1956279..1956831Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1956280..1956831 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936199.0680368-CDS-E-siliculosus-1a_M_contig8:1952077..19521891622936199.0680368-CDS-E-siliculosus-1a_M_contig8:1952077..1952189Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1952078..1952189 +
1696250973.9506989-CDS-E-siliculosus-1a_M_contig8:1952077..19521891696250973.9506989-CDS-E-siliculosus-1a_M_contig8:1952077..1952189Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1952078..1952189 +
1622936199.0850675-CDS-E-siliculosus-1a_M_contig8:1953867..19539031622936199.0850675-CDS-E-siliculosus-1a_M_contig8:1953867..1953903Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1953868..1953903 +
1696250973.9624171-CDS-E-siliculosus-1a_M_contig8:1953867..19539031696250973.9624171-CDS-E-siliculosus-1a_M_contig8:1953867..1953903Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1953868..1953903 +
1622936199.1036255-CDS-E-siliculosus-1a_M_contig8:1954296..19544851622936199.1036255-CDS-E-siliculosus-1a_M_contig8:1954296..1954485Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1954297..1954485 +
1696250973.9814336-CDS-E-siliculosus-1a_M_contig8:1954296..19544851696250973.9814336-CDS-E-siliculosus-1a_M_contig8:1954296..1954485Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1954297..1954485 +
1622936199.120282-CDS-E-siliculosus-1a_M_contig8:1955004..19550821622936199.120282-CDS-E-siliculosus-1a_M_contig8:1955004..1955082Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1955005..1955082 +
1696250973.9936094-CDS-E-siliculosus-1a_M_contig8:1955004..19550821696250973.9936094-CDS-E-siliculosus-1a_M_contig8:1955004..1955082Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1955005..1955082 +
1622936199.137076-CDS-E-siliculosus-1a_M_contig8:1955503..19562791622936199.137076-CDS-E-siliculosus-1a_M_contig8:1955503..1956279Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1955504..1956279 +
1696250974.0042233-CDS-E-siliculosus-1a_M_contig8:1955503..19562791696250974.0042233-CDS-E-siliculosus-1a_M_contig8:1955503..1956279Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1955504..1956279 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16202.1prot_E-siliculosus-1a_M_contig8.16202.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig8 1952078..1956279 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig8.16202.1

>prot_E-siliculosus-1a_M_contig8.16202.1 ID=prot_E-siliculosus-1a_M_contig8.16202.1|Name=mRNA_E-siliculosus-1a_M_contig8.16202.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=397bp
MGSRNVRCWGSTAAAAAALASKVFLGSVGLGALPAVGVSAVAKPIPAASG
TTCSNGLAGVEDPLGKVCCAPSCPQCAGGGCGGFDGALCCETNVTASSIY
CDVAQEAPCILGDVPGSLSTLISSPKSPSVAPTLTPPSGALTPTTAPKEH
MPRGLPMPSISPTQAEGLDDGVAHTSIAAASVVGSFLLVVLVLTCAGLKS
HCDEKRKSIRRSLEALFARGSFWGAMFVLFGLLIALNIYNYSSPWAAVII
FGTFVIWFGVVAWFVAFQTGTPATVSLDCPCRASRTACRVEDGNSSDAGS
SSSRSSSRSSSRSSSACSTPANVASPKRPCSSRGRGGIKTPQAAVARCSA
PSPAAVRPAADSFFPETVVSAVYFPSSTHTVFVPSTTEKIAMATTA*
back to top

mRNA from alignment at E-siliculosus-1a_M_contig8:1950657..1956831+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig8.16202.1 ID=mRNA_E-siliculosus-1a_M_contig8.16202.1|Name=mRNA_E-siliculosus-1a_M_contig8.16202.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=6175bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1950657..1956831+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
AAGGACATCTGCAAGCCACACTTCATGCAAGGAGCAGAGCACGAAGCCCC
AAGCCCCACTCGGCTTTACCCCGCGCGCGACGCGCGTTCACCCACGTGCG
CTAAAGCACCCGATTGCTGCAGCAGTTCCGCTCTACAACTTTCCACCGCT
GCTGTGTATTTTCACCTCGTACACGATATGCGTTTGGATGCAGATTTCGA
AGGCGAAGGGGCAGGGGACGCGCACCTTCACTATAATAGACTACAGCAAG
CAGTGATGCTCTGTATTGGCGCGCGCGGGGGGGGGGGAGCGGAGCAAACG
GAGCAACAAACCAAAGCGATAGAGGCCTGGTTTACGAAGTTCGGGCGGGT
ATTCTTTCACTCTGTACGTGTACATAGGCTCCGCGCTGAGAGTTGACACA
CACCAGCAGCAGCAGCAGCAGCAGCAGCACAGCGCGAGTGGGAGCACAAC
AAGCATATAAGCAGCAGCGCGCCATCGGTTCCTACTCTCGACAGAGGTGA
GCCCATCATCGCCGACGCCAAAGTCGGCCAGGTTGAAGACATGTAGGCTT
GTTCCGCTTCGTGGTACGCAGGTAGCCGCTCGTTGTTGTTGTTGATGTGT
TGTTGTTGTTGTTGTTTGCTCGTCCCGGTTGCTGTCGGTGTGTGCGGTGA
TGTGTAGCCGCTTCCAACCTGCCTGTCCTACACTGTAGGACTTTGGACTG
TCTACAAGACTCTCTGTCGTAGCGTTGATATGTATCAGGGACAGGGAAGC
TACCCGTAGAAGAAGTAGGTAGGTAACGTAATCCCCTCTAATCCCCACTA
TACTTTGCAGAAGGGAAAGTTGTGTTTGTCTGTTTTGTTGAGGAAAACAA
GTCTCGGTACTGCCGTACGAATACACGACCACGCTGTTCCAAGAACAAGC
ACCTTGTTCATCTTCCGTTCGCGCTGATGTGAACAACGGGCAGGGCAGAT
CGGGCGCCCTGCTAGATACTCCAAGTGCGGCACACAGAAAACAATGACAG
CGAGCGGGCACCTCGATACACACAACAGGCAGTATAGTTCTCGAACCCGT
GAAAGCTCAATCGTGTTGGTATGGTGCGGACGACCGCTAGCAGGGACAGG
GAGACGCGTCATCGCGACGGAAATAGGATATTTTAGAAAACATGCAAGTG
CAATCAAAGAGAGACTACAGTATAATATGCATGCATACTACGGAGATATG
CATGTAACCATACAGCAGTCGAAGGGGATGGGCTGAACTCTTACAGTCAG
TGCGTGGGGGAGAAAAACCGGCTGGATATATATGGGCCTTGCATTGAGTC
ATTTTGAGTCTGTTCTCTGAGATACTTCTAACTCCCGATCGACCATCGGT
GGTATCCACCACGGTTGGTTGACGATATTCGCCTTCCCTCCCGATATTTC
AGAGCGACAACGAAGAGATCCATGGGCTCGCGAAATGTACGTTGCTGGGG
CTCCACCGCTGCTGCTGCTGCTGCGCTGGCTTCGAAAGTGTTCCTGGGTT
CGGTTGGGTTAGGTGCCCTTCCCGCCGTCGGTGGTAAGACAACATGTTTT
CGCTTGCACTACTGCAGCATGTGCTCGCCCTATATGTAAAATGTACTTCA
ATGTACTTCAACCTGCGTAGTTTTGGCACAGTTTGGGGTTCATAGTTCCT
TGAGGGTCATACTACGAAATTCCACCACATAGATTTTTTGTATCGGTTCT
AAACCGAGCTCACAAGTGGTGCACAAGCTCTTAGAGTATTTTTTTGAGAT
TTTTTTGCAGGATTCTTAACTACCAAGCGCGGGCGCTTTGTTCAGTTGTT
GTTCTGCACGGTACGCCGCCTGCTCGGAAACACCATAACGGTCCAGATTA
AGCACGAGCACCATTATATTTCCAAGTCTGCTGCTCCTGTTCTGATATGC
GGCGTACGTAACATATCCATTGCAGCCCCTTGGTGCAAGGTACAAATAGT
GATCTGGAGGCTGTGCTCGTGCCAGAATCGTTCACACGTCCTTAAAGCAG
GGACGTCCGTTACTCCGAACAAATACCCTCCCTACCGAACGAGAAATGAA
AAAAAAAAAAGTTTCGAATTTTTCCGGCCGGCAGGACACCAAAAAAACCG
GAGATATAAAAATACCCCGTCCCAGGGGAAATCAACCGTTCCATTCGTTG
TATGTGTAGGTACACCCAAAATTGTATTTGCTTTCGATGTTTTTGTGACC
GCCTCTTCTTCTTTGTGCATGACCGCCTTTCTTTCTGTTCGTGAGAGATG
CATATTCCGGAGTACGTTTGTTTGTTTTTTGTTGACTCTATCAACGCTCC
GAACAAATTTGAAGCAGTCTGTCGTGCAGATAGATAGGTAGGTGTGTTAA
GCAGCAAGCACCACGCTTTCTTGGGTCTCATGGTTCGTCGTTGGGCAGGC
AAGCAAGGACGCGGGGATGGATGCGCTTGTGTAGTGCCCCTCTTCTACAG
GTAGCTCCAGAGCTTGACAGCAACGATTGAAACATGTTCGAAAGATGCGA
TGAAAACAAGAAAGTGGTGAAGTTCCCGCCGGTCCGTGTCTCCCTCCACA
AGCAACGAAGGAAAAGAAAAAGAAACGGGAAAAACTACCATCCCGAGAGG
TCAGAAAAACAAATATGTCAACGAGCAAACCGTCACCGCCGTCGTTCCAT
TACCCCACCATTCCAAACCCCAAAAAAGAAGCGATACTCATCTACTCTCC
TGCTCGCGTAGTTGAAATAAATATGAAGCAAAACAGAAAAGCGGGCGAGC
ACAGGCTCGCCTACACTTTTACCAGCTCGTCACTGGACGATAGCCGTCTG
ATTGTGCCAAGGTCGCCGCTCGCGAGGGCAGGGTTAGGGTTTGGTTGGGG
GGCTGGGACGACCTCCGCAAGTGAGACCCCCGCAGGGTACGGTCCCCCCC
CCCCAGTACTTGGCTCTACCCACCCGGCAGAGTATTTACCGGAATTTTCC
CGGAAAGGGGGAAGGGGCATCCCAAGTAGGCATTCATGTGGCCTCCTTGT
GGTGGGTCGTAATTTCGGCCGCTCTTTCGTTTCGTTCGAGTAGGAGAAAC
AGAGACCCAACTCTCGGCAAACCATATTGTACGGAGAGATAATGTAGGAC
GTCAACGTCCTTCTTTCATGTTCCAGATTCCCTCCCTCGTTTGTTTGGCT
CCGCTGCTCGTGATGATGCTCGACTCGTCGTCGGCGTGCCTTCGGCGCTG
TGTGCATCCAGTGTCCGCGGTGGCTAAGCCCATTCCCGCAGCGTCAGGTA
ACGGCACCTTTGTTGGTTACACCATCGGAGAGCGTTGTGGATGGCGTTAT
TGCCGGCAGACGTTGGAAGACGGAATCCGACCAAGTCACTCGTTGCTCCG
GTCCAATAGCCGCCTCACGCGTGTATTCATGTTTTAGTTCACGTCGCGTC
TGCCGGACTCGAGGGAAAAGGTCTTTCTCAAAAACGCTTACTTTTGTACA
TCCTGCGTTGGTTCCAGGGTGTGTTGCATACAGGTCACGGGTCTGCTGTT
TCGGACGAACAAGAGGCTATCTCCAGGACTCCCCGCCCCCCCCTTTACCA
ACCTCTTTCCAGCAACAGCCGCGGTGCGATGTCAATACGCGCCACGCCAT
CGTTCCCCCGCTGCTTGCTGTACCGTGTGAATGTTTTCAGGCACGACCTG
CAGCAACGGGTTGGCAGGGGTTGAGGATCCCCTCGGCAAGGTCTGCTGCG
CGCCCTCGTGTCCGCAATGCGCCGGGGGAGGGTGCGGGGGCTTCGACGGC
GCGCTTTGCTGCGAAACCAACGTGACTGCGTCGAGCATTTATTGTGATGT
CGCGCAAGAGGCCCCGTGTATCCTCGGTGGTGAGTCTCCATCTATCTGTG
CATCGTGTGCGAAAAGAACGGACCGGGAGGGGGGGCGTACTCACGCTTTG
CACGCCTTATGGCGAGTGGTTACGCCATGGACCACGCGTCCTCGATAGGA
CGGCCGGCAGGAGGTGTACACCTGGGTAATTGGGGTTGCTTCGTCATTAT
CTCTTTCATGGCTTCTCGCCATATACGGAGCAGTACCAAGCGGAGTCGTG
TACCACTGATCGTTTTTTGTTGTACCTCGGAGGAGGCAAAACCAAAGTGA
TGTAGGACGCCATCCAGACCTCAAGCGCCAAACGGTGGGGTTGATGAAAG
CCTAAGCTCGTACACGAAGCATTTAGTGCGTTGTGTTGAAAAAGTTTCGA
ATCCGCTGCATTGTGTACAAATGGCTGTTTTTCTGAGATGGGCGTACACA
TGCTTCACTACGGTTTCATTCGCCCCCCCTCCCCCCCCTCCTTCTCTGTC
GTGCCCCCGGGGATGATCTTCTTGCCGGGCTACTAACCGGCCCTTTAGAT
GTGCCGGGATCGCTTTCTACGCTTATATCTTCTCCGAAGTCACCGTCAGT
CGCGCCTACCTTGACTCCACCTTCAGGTATGTGAATTAGCAATCTCGGTG
TGATTGAACCTCCTTCCTCCGCAGACTCATCGTGTGACCACACGGCACCA
CGTGAAATTTTTTACGCCGTTCCCTTGAAATAGACGGTGCGACGAGTGGC
TCGAAATCGGGCAAAGCACGGGCGTACATTCAATTTCGCGCGTCTCACGA
CAATGTAGGTTCGGCCGCTACATGGTGTGCATCTTCGTCTATCGTCACGG
TACATGTTTGCAGACACCTGGGTGGGCAGGTAAAGGTTATCGGCGGTCCG
GTTAAGACAACGCGATCGATCTTGACGCTTCACACGAAGCGTCTCGATGT
TCGTCTTCTCTTTCCAGCGCCACGGTTGGTTTCGTTTTCGCTGGTCGGAC
ATGCCGCGACCGAAACAAACTCGACCACCCGCTCCCTCCTCCACCAGGTG
CCCTAACCCCGACAACGGCTCCTAAAGAACACATGCCAAGGGGGCTGCCG
ATGCCGTCCATCTCGCCCACCCAGGCCGAGGGGCTGGACGACGGCGTCGC
TCACACGTCAATCGCCGCCGCTTCCGTGGTGGGGAGCTTCCTGTTGGTCG
TCCTGGTGCTGACGTGCGCCGGGCTGAAGTCGCACTGCGACGAGAAACGG
AAGAGTATACGGCGGTCCTTGGAGGCGTTGTTCGCCCGGGGGTCTTTCTG
GGGCGCCATGTTCGTCCTCTTCGGCCTGCTCATCGCCCTCAACATCTACA
ACTACTCTTCGCCGTGGGCGGCGGTGATAATCTTCGGCACCTTCGTCATC
TGGTTCGGGGTGGTGGCGTGGTTCGTGGCGTTCCAGACGGGCACGCCGGC
GACGGTGTCGCTGGACTGCCCGTGCCGCGCGAGCCGCACCGCCTGTCGGG
TCGAAGACGGCAACAGCAGCGACGCCGGCAGCAGCAGCAGCAGGAGCAGC
AGCAGGAGTAGCAGCAGGAGCAGCAGTGCCTGCAGTACCCCGGCCAATGT
CGCTTCGCCTAAGCGACCGTGTTCATCTCGGGGGCGCGGGGGGATAAAGA
CTCCCCAAGCTGCTGTTGCGAGATGTTCTGCTCCCTCTCCCGCTGCTGTG
AGGCCTGCCGCGGACTCGTTCTTCCCGGAAACTGTTGTCAGCGCCGTGTA
TTTCCCGTCAAGCACACACACAGTGTTTGTCCCGTCCACCACAGAAAAAA
TCGCTATGGCTACCACCGCTTAGGGGTTGGTCTTGTACAATTCGTCGTGT
AAGTACCTTGCTTCATTGTGTAAATATGAATGACGTTCTGTTCGGGTGAT
GCGGTTCGGAGACTTGGTACAAACGCAGAAACGCAGACGATCTTTTGTGG
CATCAAGTTGGATGAGGTTCGGGAGTGAATAAATAGGTCCAAGGGCTTTA
GGTATCTCGTTGTATGCGTAGGTAGGTGTGGATTTTGTTGCCGTGATACT
CGTCGTCGATGACGTAGCAGACTTAAATCGGCACGTTTTTTGGGGCGGCG
GGGGCTGGGGCAAGGATCGGTGTTTGTATAGGAAATAGGGAGAAGTGGCT
CTATTTGCGTCTCAGGGGGCGCCGGAGAGTAGACAAAGAAATTTATCGTT
TTTTTGGGAATAGCGCATAATCTACTCCATGGCGTGGTTGTACACACATA
TTTTCCTCGTTTTTTCTTGGAGAAACAATTGATTGGTAAAGAGCTAGGAA
ACATTCTCGATGCAAGTAGATATTTTATTTGTACAGATGGCACCGCGAAA
AAAAAATTGTTCAGGGGAACTCCCG
back to top

Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1950657..1956831+

>mRNA_E-siliculosus-1a_M_contig8.16202.1 ID=mRNA_E-siliculosus-1a_M_contig8.16202.1|Name=mRNA_E-siliculosus-1a_M_contig8.16202.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2382bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1950657..1956831+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGGCTCGCGAAATGTACGTTGCTGGGGCTCCACCGCTGCTGCTGCTGC
TGCGCTGGCTTCGAAAGTGTTCCTGGGTTCGGTTGGGTTAGGTGCCCTTC
CCGCCGTCGGTGATGGGCTCGCGAAATGTACGTTGCTGGGGCTCCACCGC
TGCTGCTGCTGCTGCGCTGGCTTCGAAAGTGTTCCTGGGTTCGGTTGGGT
TAGGTGCCCTTCCCGCCGTCGGTGTGTCCGCGGTGGCTAAGCCCATTCCC
GCAGCGTCAGTGTCCGCGGTGGCTAAGCCCATTCCCGCAGCGTCAGGCAC
GACCTGCAGCAACGGGTTGGCAGGGGTTGAGGATCCCCTCGGCAAGGTCT
GCTGCGCGCCCTCGTGTCCGCAATGCGCCGGGGGAGGGTGCGGGGGCTTC
GACGGCGCGCTTTGCTGCGAAACCAACGTGACTGCGTCGAGCATTTATTG
TGATGTCGCGCAAGAGGCCCCGTGTATCCTCGGTGGCACGACCTGCAGCA
ACGGGTTGGCAGGGGTTGAGGATCCCCTCGGCAAGGTCTGCTGCGCGCCC
TCGTGTCCGCAATGCGCCGGGGGAGGGTGCGGGGGCTTCGACGGCGCGCT
TTGCTGCGAAACCAACGTGACTGCGTCGAGCATTTATTGTGATGTCGCGC
AAGAGGCCCCGTGTATCCTCGGTGATGTGCCGGGATCGCTTTCTACGCTT
ATATCTTCTCCGAAGTCACCGTCAGTCGCGCCTACCTTGACTCCACCTTC
AGATGTGCCGGGATCGCTTTCTACGCTTATATCTTCTCCGAAGTCACCGT
CAGTCGCGCCTACCTTGACTCCACCTTCAGGTGCCCTAACCCCGACAACG
GCTCCTAAAGAACACATGCCAAGGGGGCTGCCGATGCCGTCCATCTCGCC
CACCCAGGCCGAGGGGCTGGACGACGGCGTCGCTCACACGTCAATCGCCG
CCGCTTCCGTGGTGGGGAGCTTCCTGTTGGTCGTCCTGGTGCTGACGTGC
GCCGGGCTGAAGTCGCACTGCGACGAGAAACGGAAGAGTATACGGCGGTC
CTTGGAGGCGTTGTTCGCCCGGGGGTCTTTCTGGGGCGCCATGTTCGTCC
TCTTCGGCCTGCTCATCGCCCTCAACATCTACAACTACTCTTCGCCGTGG
GCGGCGGTGATAATCTTCGGCACCTTCGTCATCTGGTTCGGGGTGGTGGC
GTGGTTCGTGGCGTTCCAGACGGGCACGCCGGCGACGGTGTCGCTGGACT
GCCCGTGCCGCGCGAGCCGCACCGCCTGTCGGGTCGAAGACGGCAACAGC
AGCGACGCCGGCAGCAGCAGCAGCAGGAGCAGCAGCAGGAGTAGCAGCAG
GAGCAGCAGTGCCTGCAGTACCCCGGCCAATGTCGCTTCGCCTAAGCGAC
CGTGTTCATCTCGGGGGCGCGGGGGGATAAAGACTCCCCAAGCTGCTGTT
GCGAGATGTTCTGCTCCCTCTCCCGCTGCTGTGAGGCCTGCCGCGGACTC
GTTCTTCCCGGAAACTGTTGTCAGCGCCGTGTATTTCCCGTCAAGCACAC
ACACAGTGTTTGTCCCGTCCACCACAGAAAAAATCGCTATGGCTACCACC
GCTTAGGTGCCCTAACCCCGACAACGGCTCCTAAAGAACACATGCCAAGG
GGGCTGCCGATGCCGTCCATCTCGCCCACCCAGGCCGAGGGGCTGGACGA
CGGCGTCGCTCACACGTCAATCGCCGCCGCTTCCGTGGTGGGGAGCTTCC
TGTTGGTCGTCCTGGTGCTGACGTGCGCCGGGCTGAAGTCGCACTGCGAC
GAGAAACGGAAGAGTATACGGCGGTCCTTGGAGGCGTTGTTCGCCCGGGG
GTCTTTCTGGGGCGCCATGTTCGTCCTCTTCGGCCTGCTCATCGCCCTCA
ACATCTACAACTACTCTTCGCCGTGGGCGGCGGTGATAATCTTCGGCACC
TTCGTCATCTGGTTCGGGGTGGTGGCGTGGTTCGTGGCGTTCCAGACGGG
CACGCCGGCGACGGTGTCGCTGGACTGCCCGTGCCGCGCGAGCCGCACCG
CCTGTCGGGTCGAAGACGGCAACAGCAGCGACGCCGGCAGCAGCAGCAGC
AGGAGCAGCAGCAGGAGTAGCAGCAGGAGCAGCAGTGCCTGCAGTACCCC
GGCCAATGTCGCTTCGCCTAAGCGACCGTGTTCATCTCGGGGGCGCGGGG
GGATAAAGACTCCCCAAGCTGCTGTTGCGAGATGTTCTGCTCCCTCTCCC
GCTGCTGTGAGGCCTGCCGCGGACTCGTTCTTCCCGGAAACTGTTGTCAG
CGCCGTGTATTTCCCGTCAAGCACACACACAGTGTTTGTCCCGTCCACCA
CAGAAAAAATCGCTATGGCTACCACCGCTTAG
back to top