prot_E-siliculosus-1a_M_contig8.16201.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16201.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16201.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length512
Homology
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 112 bits (279), Expect = 9.990e-23
Identity = 62/143 (43.36%), Postives = 84/143 (58.74%), Query Frame = 0
Query:  158 ATCSNGVPGVENFMGTVCCPILCGDTCGGSTC-----GEVDATNCCASSIVEMNVDCDVSEEAPCVISDSGSTT-ATCSNGVAGVENEMGTVCCPIECGDFCGGEECV----INALLCCSSSIIDSDVYCDESDEAPCVIGSA 290
            A CSNG+ G+++    VCC   C + CGG  C       + + +CCA+ IVE    CDVS  APC+I+ + +   + C NG  GV +    VCCP+ECGD CGGE C     +NA  CCSS II+S   C ++  APCV+G+A
Sbjct:   28 AVCSNGLEGIQSTSLDVCCVEGC-EVCGGVDCTPANTSSLTSADCCATEIVESGTFCDVSMAAPCIITTAAAANDSVCENGQTGVPDPDTDVCCPLECGDSCGGEGCGSIPGVNATQCCSSLIIESGAVCSDTVSAPCVVGAA 169          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: D8LML5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LML5_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 2.470e-22
Identity = 58/143 (40.56%), Postives = 83/143 (58.04%), Query Frame = 0
Query:  158 ATCSNGVPGVENFMGTVCCPILCGDTCGGSTC-----GEVDATNCCASSIVEMNVDCDVSEEAPCVISDSG-STTATCSNGVAGVENEMGTVCCPIECGDFCGGEECV----INALLCCSSSIIDSDVYCDESDEAPCVIGSA 290
            A CSNG+ G+++     CC   CG  CGG  C       + + +CCA+ I+E    C+VS  APC+I+ +  S  + C NG  GV++    VCCP+ CGD CGGE C     ++A  CCS+ II+S   C ++  APCV+G+A
Sbjct:   28 AVCSNGLEGIQSTSLDACCVEECG-LCGGVGCTPANTSSLTSADCCATEIIESGTLCEVSMAAPCIITTAAASNDSVCENGQTGVQDPDTDVCCPLVCGDSCGGEGCGSLAGVDATQCCSNLIIESGAVCSDTVSAPCVVGAA 169          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 3.420e-22
Identity = 65/148 (43.92%), Postives = 85/148 (57.43%), Query Frame = 0
Query:  159 TCSNGVPGVENFMGTVCCPILCGDTCGGSTCGE------VDATNCCASSIVEMNVDCDVSEEAPCVISDSGSTTAT----CSNGVAGVENEMGTVCCPIECGDFCGGEECV-------INALLCCSSSIIDSDVYCDESDEAPCVIGS 289
            TCSNG+ G++   G VCCP+ CG  CGG+ C        +D ++CC  SI      CD + +APC+I  S + + T    CSNGV G++   G VCCP+ CG  CGG  C        + A  CC  SI  SD YCDE++EAPC+IGS
Sbjct:  269 TCSNGLEGIDG-NGVVCCPLGCGQ-CGGTGCNTSGAAAGLDGSSCCGGSIKASGKYCDETNDAPCIIGSSPAPSPTPSETCSNGVEGIDGN-GVVCCPLGCGQ-CGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCIIGS 412          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 2.950e-21
Identity = 61/148 (41.22%), Postives = 83/148 (56.08%), Query Frame = 0
Query:  157 VATCSNGVPGVENFMGTVCCPILCGDTCGGSTC------GEVDATNCCASSIVEMNVDCDVSEEAPCVISDSGSTTATCSNGVAGVENEMGTVCCPIECGDFCGGEECV-------INALLCCSSSIIDSDVYCDESDEAPCVIGSAS 291
            V TCSNG+ G+E   G VCCP+ C + CGG+ C        + + +CC   I      CD + EAPC+I    +T  TCSNG+ G++   G VCCP+EC   CGG  C        + +  CC   I  S  YCD+++EAPC+IGS+S
Sbjct:  469 VETCSNGLEGIEG-NGVVCCPLEC-NQCGGTGCTMSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCIIGSRPTTVETCSNGLEGIDGN-GVVCCPLECNQ-CGGTGCTTSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCIIGSSS 612          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: D8LG71_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG71_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.470e-19
Identity = 57/137 (41.61%), Postives = 79/137 (57.66%), Query Frame = 0
Query:  159 TCSNGVPGVENFMGTVCCPILCGDTCGGSTC-----GEVDATNCCASSIVEMNVDCDVSEEAPCVIS-DSGSTTATCSNGVAGVENEMGTVCCPIECGDFCGGEECV----INALLCCSSSIIDSDVYCDESDEAPC 285
            TC+ G+ GVE+    VCC + CG TCGG  C       + A +CCA+ I E  V C  +  APC++S ++ S  + C NG  GV++    VCCP+ECG+ CGGE C     ++A  CC+S I  S + C +  EAPC
Sbjct:   24 TCAGGISGVESTSLDVCCTLECG-TCGGVGCTPANTSSLTANDCCATEISESGVMCSDTGVAPCILSTEAASADSVCDNGQTGVQDPDTDVCCPLECGESCGGEGCGTIPGVDASQCCASIIEQSGIVCGDGIEAPC 159          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 101 bits (252), Expect = 5.050e-19
Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = 0
Query:  159 TCSNGVPGVENFMGTVCCPILCGDTCGGSTCGEVDATN------CCASSIVEMNVDCDVSEEAPCVI----------SDSGSTTATCSNGVAGVENEMGTVCCPIECGDFCGGEECV-------INALLCCSSSIIDSDVYCDESDEAPCVIGSASDT 293
            TCS+G  G++   G VCCPI CG  C G  CG   + N      CC + +  + + CD + EAPC+I          S+S   T TCS+G  G++   G VCCPI CG  C G+ C        + +  CC + +    +YCD+++EAPC+IGS  DT
Sbjct:  420 TCSDGTEGIDG-NGVVCCPIGCGQ-CAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDTDDVDSESADETQTCSDGTEGIDGN-GVVCCPIGCGQ-CAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCIIGSRPDT 573          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: A0A6H5JUS5_9PHAE (MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS5_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.950e-16
Identity = 55/153 (35.95%), Postives = 80/153 (52.29%), Query Frame = 0
Query:  162 NGVPGVENFMGTVCCPILCGDTCGGSTCGEVDATN------CCASSIVEMNVDCDVSEEAPCVIS--------------DSGSTTATCSNGVAGVENEMGTVCCPIECGDFCGGEEC-------VINALLCCSSSIIDSDVYCDESDEAPCVI 287
            +G  G++   G VCCPI CG  CGG  C    + N      CC   +  + V CD + EAPC+I               +S   T TCSNG+ G++++ G VCCP+ CG  CGG  C        ++   CCSS ++  +VYC++++ APC+I
Sbjct:  575 DGTEGIDG-NGVVCCPIGCGQ-CGGDGCSTAGSANGLGSESCCGGGVKSLGVYCDDTNEAPCIIGSAPDTDDVDSGISEESADDTQTCSNGIEGIDHK-GEVCCPLACGQ-CGGTGCGSAGSAFELDGESCCSSQVLAGNVYCEDTNAAPCII 723          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: A0A6H5JZG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZG5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.980e-16
Identity = 64/177 (36.16%), Postives = 83/177 (46.89%), Query Frame = 0
Query:  159 TCSNGVPGVENFMGTVCCPILCGDTCGGSTCGEVDATN------CCASSIVEMNVDCDVSEEAPCVISDS---------------------------------GSTTATCSNGVAGVENEMGTVCCPIECGDFCGGEECVI----NAL---LCCSSSIIDSDVYCDESDEAPCVIGS 289
            TCSNG+ G++   G VCC + CG  CGG  C    + N      CC+  I   +  CD + EAPC+I                                    G +  TCSNG+ G++   G VCCP++CG  CGG+ C      N L    CCS  I  SD YCDE++EAPC+IGS
Sbjct:  240 TCSNGLEGIDG-SGGVCCSLDCGQ-CGGKGCYTSGSANGLGGDFCCSGGIKASDEYCDETNEAPCIIGSRPGAKMIHVPSLHVIYDRVTHKQACLANVYLFFLGQSVETCSNGLEGIDGSGG-VCCPLDCGQ-CGGKGCYTSGSANGLGGDFCCSGGIKASDEYCDETNEAPCIIGS 412          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: A0A6H5JYT7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 1.550e-15
Identity = 59/164 (35.98%), Postives = 80/164 (48.78%), Query Frame = 0
Query:  157 VATCSNGVPGVENFMGTVCCPILCGDTCGGSTCGEVDATN------CCASSIVEMNVDCDVSEEAPCVISDSGST--------------------TATCSNGVAGVENEMGTVCCPIECGDFCGGEECV-------INALLCCSSSIIDSDVYCDESDEAPCVI 287
            V TCS+G+ G++   G VCCP+ CG  C GS CG   A N      CC   I      CD +  APC+   + +                       TCSN + G++++ G VCCP+ CG  CGG  C        + A  CCSS + DS  YCD+++EAPC+I
Sbjct:  646 VGTCSDGIEGIDG-NGVVCCPLGCGQ-CAGSGCGAAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCIYGSAPNADDDXXXXXXXXXXXXXXXXXATTCSNDLEGIDHK-GEVCCPLGCGQ-CGGSGCSTSGASNGLGAESCCSSEVKDSGRYCDDANEAPCII 805          
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 1.050e-7
Identity = 38/77 (49.35%), Postives = 47/77 (61.04%), Query Frame = 0
Query:  221 DSGSTTATCSNGVAGVENEMGTVCCPIECGDFCGGEECV-------INALLCCSSSIIDSDVYCDESDEAPCVIGSA 290
            DS S T TCSNGV G++   G VCCP+EC   CGG  C        + A  CC S +  S  YCD++DEAPC+IGS+
Sbjct:  520 DSASVT-TCSNGVQGIDGN-GIVCCPMECNQ-CGGSGCTHAGRAAGLGAESCCGSGVKASGRYCDDTDEAPCIIGSS 593          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16201.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
A0A6H5K7R2_9PHAE9.990e-2343.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LML5_ECTSI2.470e-2240.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JC43_9PHAE3.420e-2243.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQV4_ECTSI2.950e-2141.22Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
D8LG71_ECTSI2.470e-1941.61Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G651_ECTSI5.050e-1937.97Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
A0A6H5JUS5_9PHAE1.950e-1635.95MEP12 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5JZG5_9PHAE2.980e-1636.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYT7_9PHAE1.550e-1535.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUJ9_ECTSI1.050e-749.35Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..351
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 377..396
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 445..511
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 352..376
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 422..426
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 397..421
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 427..444
NoneNo IPR availableTMHMMTMhelixcoord: 354..376
NoneNo IPR availableTMHMMTMhelixcoord: 420..442
NoneNo IPR availableTMHMMTMhelixcoord: 397..416

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1944706..1949044 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16201.1mRNA_E-siliculosus-1a_M_contig8.16201.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1931413..1949353 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16201.1 ID=prot_E-siliculosus-1a_M_contig8.16201.1|Name=mRNA_E-siliculosus-1a_M_contig8.16201.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=512bp
MGTSGMHQWRSDPTAAAASTHASSKMFVASMAVLIMLSGKRLLVTKARTL
DATTTSSADTPAPSAATTAPAAAPSSRGGERTRVPLSAPAATVAPTAAPV
LGTAAATMAATAAPVSATAAATMAPTAAPVSATANPAPTTATANATVAPS
SAPTAFVATCSNGVPGVENFMGTVCCPILCGDTCGGSTCGEVDATNCCAS
SIVEMNVDCDVSEEAPCVISDSGSTTATCSNGVAGVENEMGTVCCPIECG
DFCGGEECVINALLCCSSSIIDSDVYCDESDEAPCVIGSASDTPSPVAVL
LPTPDSTTAPGEATAPPSNSSSGGGTDPTTVPPTTTPAEVSSEDDDNTRQ
TLSIVGAAVCAALASAVFVLTCVGLKSHCAAEGKSIRRSLEVLCGKGSFW
SAMFVLVGLLIALNVVSLGWVWGAVSVYASVVLIFVVVAWFVAFKTGTPA
TVSLQCACCICPYKPSSFSVKNEQTCPHREDSVSRIAPGEEAPAWEEQRG
AASSASSDSSF*
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