prot_E-siliculosus-1a_M_contig8.16198.1 (polypeptide) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16198.1
Unique Nameprot_E-siliculosus-1a_M_contig8.16198.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Sequence length289
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16198.1 vs. uniprot
Match: D7FNX6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNX6_ECTSI)

HSP 1 Score: 450 bits (1158), Expect = 4.170e-158
Identity = 253/288 (87.85%), Postives = 255/288 (88.54%), Query Frame = 0 
Query:    1 MTEGVAMSEVDEVQDRVMEIAALLKNKAPHLAPSVIPRPYKHAAANIVTLCSTPRQRADAEAFLASKAESATADDVAAEGKKGRGEEGQQIESEDAAEGGRHHVVLETETDIATRTFRITAAKLGGRIDATLSDLNLLMDLLLNAPRQELEPYVERFAAANELDPSTAALALHGACSLAYALQVATSSIAGWNGFVGSHRLPLAGDVDMTVVMKELFRPPPTPPASPRSHSKSKTKGKKGXXXXXXXXXXXXXXXXXXXGESGAAGVEGGVSGKGKTAKKGSKRKKQG 288
            MTEGVAM EVDEVQDRVMEIAALLK KAPHLAPSVIPRPYKHAAANIVTLCSTPRQRADAEAFLASKAESAT DDVAA G++GRGEEGQQIESEDAAEGGRHHVVLETETDIATRTFRITAAKLGGRIDATLSDLNLLMDL LNAPRQELEPYVERFAAANELDPSTAALALHGACSLAYALQVATSSIAGWNGFVGSH LPLAGDVDMTVVM ELFRPPPTPPASPRS     TKGKKG                   GESGAAGVEG VS KGKTAKKGSKRKKQG
Sbjct:    1 MTEGVAMGEVDEVQDRVMEIAALLKKKAPHLAPSVIPRPYKHAAANIVTLCSTPRQRADAEAFLASKAESATVDDVAAAGERGRGEEGQQIESEDAAEGGRHHVVLETETDIATRTFRITAAKLGGRIDATLSDLNLLMDLHLNAPRQELEPYVERFAAANELDPSTAALALHGACSLAYALQVATSSIAGWNGFVGSHPLPLAGDVDMTVVMNELFRPPPTPPASPRSXXXXXTKGKKGGAKKKKAAAAG--------GESGAAGVEGVVSEKGKTAKKGSKRKKQG 280
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16198.1 vs. uniprot
Match: A0A7S2SU08_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SU08_9STRA)

HSP 1 Score: 56.2 bits (134), Expect = 6.420e-6
Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 0 
Query:  118 RITAAK--LGGRIDATLSDLNLLMDLLLNAPRQELEPYVERFAAANELDPSTAALALHGACSLAYALQVATSSIAGWNGFVGSHRLPLAGDVDMTVVMKEL 216
            R+T  K  L G + ATLS+L+ ++ L L+    ELEPYV  F   N  +    A  +  A ++AY+ QV   ++ GW   +G H++P+  +V +  V+ EL
Sbjct:   88 RVTVDKFLLVGEVQATLSNLDAMLQLQLHGSPAELEPYVTFFGDRNRSEEP--ARDMQEALNVAYSAQVVVDNMPGWATRIGEHKVPVPSNVPVRQVISEL 186
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FNX6_ECTSI4.170e-15887.85Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SU08_9STRA6.420e-634.65Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 279..288

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1912653..1915333 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a male2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16198.1mRNA_E-siliculosus-1a_M_contig8.16198.1Ectocarpus siliculosus Ec864m_EcPH12_78m malemRNAE-siliculosus-1a_M_contig8 1912551..1915720 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_M_contig8.16198.1 ID=prot_E-siliculosus-1a_M_contig8.16198.1|Name=mRNA_E-siliculosus-1a_M_contig8.16198.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=289bp
MTEGVAMSEVDEVQDRVMEIAALLKNKAPHLAPSVIPRPYKHAAANIVTL
CSTPRQRADAEAFLASKAESATADDVAAEGKKGRGEEGQQIESEDAAEGG
RHHVVLETETDIATRTFRITAAKLGGRIDATLSDLNLLMDLLLNAPRQEL
EPYVERFAAANELDPSTAALALHGACSLAYALQVATSSIAGWNGFVGSHR
LPLAGDVDMTVVMKELFRPPPTPPASPRSHSKSKTKGKKGGAKKKKAAAA
AAAAAAAAGGESGAAGVEGGVSGKGKTAKKGSKRKKQG*
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