mRNA_E-siliculosus-1a_M_contig8.16180.1 (mRNA) Ectocarpus siliculosus Ec864m_EcPH12_78m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_M_contig8.16180.1
Unique NamemRNA_E-siliculosus-1a_M_contig8.16180.1
TypemRNA
OrganismEctocarpus siliculosus Ec864m_EcPH12_78m male (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
Homology
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: D7FNZ5_ECTSI (DUF1279 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNZ5_ECTSI)

HSP 1 Score: 805 bits (2080), Expect = 2.260e-288
Identity = 446/471 (94.69%), Postives = 454/471 (96.39%), Query Frame = 1 
Query:   25 MAMVARRLGPVQTVVLRRTGLGDGSLLLPASRTIASIPGPINKASPKPSRRSPSCRNTYSTSAARGTAPVVTMQPLKGPPCVLRSSGSVGGNSATCIRRNLHCNSGRAVATADWLRPPVGAVLLRQGDASRAGGMPSPSAVNQLPTGGHGVVFLQAAGVRTMSRVFAPATGGAAGKKPGGEATSPSQPGSGNGHSSKTPPSPSEIRQPAGSGGRGASNNMDPPAAKPNNPQA--AEKPAGSIGDNERTVKGGNPDLRDREGTFVEMRDRIRHARADASEDAKDWMRXXXXXXXXXXXXXXXXXXXXXXXXXDGTLGAQLSDQAKESSNRLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLTSLPSGGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAKVSDADEDEGSDADDGSGGSRKQGSTR 1431
            MAMVARRLGPVQTVVLRRTGLGDGSLLLPASRTIASIPGPINKASPKPSRRSPSCRNTYSTSAARGTAPV TMQP+KGPPCVLRSSGSVGGNSATCIRRNLHCNSGRAVATADWLRP VGAVLLRQGDASRAGGMPS SAVNQLP+GGHGVVF+QAAG+RT+SRVFAPATGGAAGKKPGGEA SPSQPG GNGH SKTPPSPSEIR PAGSGGRGAS+NMDPPAAK NNPQA  AEKPAGSIGDNERTVKGGNPDLRDREG FVEMRDRIRHARADASEDAKDWMR XXXXXXXXXXXXXXXXXXXXX   DGTLGAQLSDQAKESSNRLQDLWRKYGAVGIGTYFGIYFGSIA+FYGIYDYGVLTSLPSGGTAVIEHMQEWMK+APEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAKVSDADEDEGSDADDGSGG RK GSTR
Sbjct:    1 MAMVARRLGPVQTVVLRRTGLGDGSLLLPASRTIASIPGPINKASPKPSRRSPSCRNTYSTSAARGTAPVATMQPVKGPPCVLRSSGSVGGNSATCIRRNLHCNSGRAVATADWLRPTVGAVLLRQGDASRAGGMPSSSAVNQLPSGGHGVVFVQAAGLRTLSRVFAPATGGAAGKKPGGEAASPSQPGGGNGHGSKTPPSPSEIRPPAGSGGRGASSNMDPPAAKLNNPQAEAAEKPAGSIGDNERTVKGGNPDLRDREGPFVEMRDRIRHARADASEDAKDWMRDXXXXXXXXXXXXXXXXXXXXXARLDGTLGAQLSDQAKESSNRLQDLWRKYGAVGIGTYFGIYFGSIAVFYGIYDYGVLTSLPSGGTAVIEHMQEWMKSAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAKVSDADEDEGSDADDGSGGGRKGGSTR 471
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: A0A836CLB5_9STRA (DUF1279 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB5_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.210e-25
Identity = 53/118 (44.92%), Postives = 80/118 (67.80%), Query Frame = 1 
Query: 1009 QDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLTS--LPSGGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAKV 1356
            +++WR+YG V +GTYFGIY  ++   Y ++DYG +T+  +P+G     + +Q  ++  P+WAQ   + L+  M ++   R+FVLAW T KV EPVR+L  + ITPR+ARALGRAP K+
Sbjct:    2 KEMWRRYGLVAVGTYFGIYVATLGGLYLVFDYGFMTASDMPAGAAHAGDTLQALVERLPDWAQAKVNALYAKMQQEPGFRNFVLAWLTTKVTEPVRVLATVGITPRIARALGRAPKKL 119
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: A0A3R7J9G6_9STRA (DUF1279 domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J9G6_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 1.010e-10
Identity = 47/121 (38.84%), Postives = 60/121 (49.59%), Query Frame = 1 
Query: 1000 NRLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYG-VLTSLPSGGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARS----FVLAWATCKVLEPVRLLGAIAITPRMARALGRAP 1347
            +RL+DLWRKYG V IGTY  +Y   +   Y   D G V TS         E     +    ++ +   D      +E  R  S    F+LAW   K  EPVRL   +A+TPR+AR LGRAP
Sbjct:    5 DRLKDLWRKYGIVAIGTYLSLYGAVLGSIYVAIDQGWVRTSKRRSSREGQEESFNLITTTNKFVKFAEDMGIAQYLEVERVNSKTGSFLLAWVATKFTEPVRLAVTLAVTPRIARFLGRAP 125
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: F0W5K2_9STRA (Uncharacterized protein AlNc14C21G2167 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W5K2_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 1.920e-10
Identity = 46/132 (34.85%), Postives = 66/132 (50.00%), Query Frame = 1 
Query: 1000 NRLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLTSLPSGGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDH-------------RARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAKV 1356
            NR +DLWRKYG V IGTYF +Y        GI    +  S+ +G  +   +++       ++    +     A+ ED+             +  SFV+AW   K  EP+RL   +AITPR+AR LGRAP K+
Sbjct:    4 NRFKDLWRKYGLVAIGTYFTMY--------GIVLGTIYISIENGLISKNRNVRSNKDTTTDFDVVSTTNKMIALAEDYGLAKYLDVERVNSKTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPKKM 127
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: A0A024GSA6_9STRA (DUF1279 domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GSA6_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 2.930e-10
Identity = 54/133 (40.60%), Postives = 70/133 (52.63%), Query Frame = 1 
Query:  982 QAKESSNRLQDLWRKYGAVGIGTYF---GIYFGSI--AIFYGIYDYGVLTSLPSGGTA---VIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAKV 1356
            Q++   NR +DLWRKYG V IGTYF   GI  GSI  +I  G+      T L    T    V+    + +  A ++  G    L    V   +  SFV+AW   K  EP+RL   +AITPR+AR LGRAP K+
Sbjct:   56 QSQTHLNRFKDLWRKYGLVAIGTYFTMYGIVLGSIYISIENGLISKNRNTRLNKDTTTNFDVVSTTNKMIALAEDY--GLVKYLDVERVNS-KTGSFVIAWVATKFTEPIRLAITLAITPRIARFLGRAPKKI 185
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: D0MUM9_PHYIT (DUF1279 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MUM9_PHYIT)

HSP 1 Score: 67.8 bits (164), Expect = 2.490e-9
Identity = 47/121 (38.84%), Postives = 60/121 (49.59%), Query Frame = 1 
Query: 1003 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLTS---LPSGGTAVIEHMQEWMKNAPEWAQ---GYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAP 1347
            RL+DLWRKYG V IGTY  +Y   +   Y   D G L +     S G    +     +    +W     G +  L    V   +  +F+LAW   K  EPVRL   IA+TPR+AR LGRAP
Sbjct:   42 RLKDLWRKYGIVAIGTYLSMYGAVLGSMYLAIDQGWLRTNRRTSSKGEGQSDESFNLVATTNKWIAEDLGIAQYLEVEQVSS-KTGTFLLAWIATKFTEPVRLALTIAVTPRIARFLGRAP 161
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: A0A5D6XY22_9STRA (DUF1279 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY22_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 5.090e-9
Identity = 46/120 (38.33%), Postives = 65/120 (54.17%), Query Frame = 1 
Query: 1003 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLTSLPSGGTAVIEHMQEWMKNAPEWAQGYSDRLFGAM---VEDHRARS--FVLAWATCKVLEPVRLLGAIAITPRMARALGRAP 1347
            RL DLWRKYGAV IGTYFG+Y   +   Y   D G +++         +  +  +  A      +++ L  A    VE   A++  F++AW   K  EP+RL   +AITPR+AR +GRAP
Sbjct:   97 RLMDLWRKYGAVAIGTYFGMYGAVLGSIYVAIDLGWVSTAKPARDGEPDDDEFNVVAATNKFVTFAENLGIAKYLEVEHVNAKTGTFLIAWIATKFTEPLRLAITLAITPRIARFVGRAP 216
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: A0A8K1C653_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C653_PYTOL)

HSP 1 Score: 67.4 bits (163), Expect = 6.770e-9
Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 1 
Query:  970 QLSDQAKESSNRLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVL----TSLPSG--GTAVIEHMQEWMKN-APEWAQ--GYSDRLFGAMVEDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAP 1347
            ++ ++ K   ++L++LWR+YG V +GTYF +YF  +   Y   + G +    TS   G  G A  +       N    WA+  G +  L    V + +  SFV+AW   K  EP+RL   +AITPR+AR +GRAP
Sbjct:   84 EMVEKGKSGWSKLKELWRQYGMVAVGTYFSMYFTVLGSIYVAIEQGWVSTKRTSRSEGENGEANADFNVVTATNKVVTWAEDMGIAKHLDLQRV-NAKTGSFVIAWVATKFTEPLRLAVTLAITPRIARLVGRAP 217
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: H3GLJ1_PHYRM (DUF1279 domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GLJ1_PHYRM)

HSP 1 Score: 67.0 bits (162), Expect = 7.600e-9
Identity = 46/122 (37.70%), Postives = 60/122 (49.18%), Query Frame = 1 
Query: 1003 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLTS---LPSGGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARS----FVLAWATCKVLEPVRLLGAIAITPRMARALGRAP 1347
            RL+DLWRKYG V IGTY  +Y   +   Y   D G + +     S G    +     +    ++ +   D      +E  R  S    F+LAW   K  EPVRL   IA+TPR+AR LGRAP
Sbjct:   70 RLKDLWRKYGVVAIGTYLTMYGAVLGSVYLAIDQGWVRTNKRTSSKGEGQSDETFNLVTTTNKFVRFAEDLGIAQYLEVERVNSKTGTFLLAWIATKFTEPVRLALTIAVTPRIARFLGRAP 191
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BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Match: A0A6A3TMX1_9STRA (DUF1279 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TMX1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.320e-8
Identity = 45/122 (36.89%), Postives = 60/122 (49.18%), Query Frame = 1 
Query: 1003 RLQDLWRKYGAVGIGTYFGIYFGSIAIFYGIYDYGVLTSLP---SGGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMVEDHRARS----FVLAWATCKVLEPVRLLGAIAITPRMARALGRAP 1347
            RL+DLWRKYG V IGTY  +Y   +   Y   D G + +     S G    +     +    ++ +   D      +E  R  S    F+LAW   K  EPVRL   +A+TPR+AR LGRAP
Sbjct:   66 RLKDLWRKYGVVAIGTYMSMYGVVLGSMYLAIDQGWVHTAKRSSSKGEGQADESFNLVTTTNKFVKIAEDLGIAQYLEVERVNSKTGTFLLAWIATKFTEPVRLAVTLAVTPRIARFLGRAP 187
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_M_contig8.16180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNZ5_ECTSI2.260e-28894.69DUF1279 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CLB5_9STRA1.210e-2544.92DUF1279 domain-containing protein (Fragment) n=1 T... [more]
A0A3R7J9G6_9STRA1.010e-1038.84DUF1279 domain-containing protein n=3 Tax=Phytopht... [more]
F0W5K2_9STRA1.920e-1034.85Uncharacterized protein AlNc14C21G2167 n=1 Tax=Alb... [more]
A0A024GSA6_9STRA2.930e-1040.60DUF1279 domain-containing protein n=1 Tax=Albugo c... [more]
D0MUM9_PHYIT2.490e-938.84DUF1279 domain-containing protein n=1 Tax=Phytopht... [more]
A0A5D6XY22_9STRA5.090e-938.33DUF1279 domain-containing protein n=1 Tax=Pythium ... [more]
A0A8K1C653_PYTOL6.770e-935.56Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
H3GLJ1_PHYRM7.600e-937.70DUF1279 domain-containing protein n=1 Tax=Phytopht... [more]
A0A6A3TMX1_9STRA1.320e-836.89DUF1279 domain-containing protein n=3 Tax=Phytopht... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_M_contig8contigE-siliculosus-1a_M_contig8:1688469..1691890 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a male vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec864m_EcPH12_78m male2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size1410
Model size2128
Exons4
Ec32 orthologEc-10_004940.1
Ec32 ortholog descriptionDomain of unknown function DUF1279
Hectar predicted targeting categorymitochondrion
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.S
EggNOG OGsKOG4526@1,KOG4526@2759
EggNOG free text desc.N-terminal peptidyl-methionine acetylation
Seed eggNOG ortholog42099.EPrPV00000018888
Seed ortholog evalue6.3e-10
Seed ortholog score72.4
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_M_contig8.16180.1prot_E-siliculosus-1a_M_contig8.16180.1Ectocarpus siliculosus Ec864m_EcPH12_78m malepolypeptideE-siliculosus-1a_M_contig8 1688493..1691196 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936193.974984-UTR-E-siliculosus-1a_M_contig8:1688468..16884921622936193.974984-UTR-E-siliculosus-1a_M_contig8:1688468..1688492Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1688469..1688492 +
1696250971.6234722-UTR-E-siliculosus-1a_M_contig8:1688468..16884921696250971.6234722-UTR-E-siliculosus-1a_M_contig8:1688468..1688492Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1688469..1688492 +
1622936194.0809314-UTR-E-siliculosus-1a_M_contig8:1691196..16918901622936194.0809314-UTR-E-siliculosus-1a_M_contig8:1691196..1691890Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1691197..1691890 +
1696250971.6907864-UTR-E-siliculosus-1a_M_contig8:1691196..16918901696250971.6907864-UTR-E-siliculosus-1a_M_contig8:1691196..1691890Ectocarpus siliculosus Ec864m_EcPH12_78m maleUTRE-siliculosus-1a_M_contig8 1691197..1691890 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622936193.9989607-CDS-E-siliculosus-1a_M_contig8:1688492..16893771622936193.9989607-CDS-E-siliculosus-1a_M_contig8:1688492..1689377Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1688493..1689377 +
1696250971.637177-CDS-E-siliculosus-1a_M_contig8:1688492..16893771696250971.637177-CDS-E-siliculosus-1a_M_contig8:1688492..1689377Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1688493..1689377 +
1622936194.0196185-CDS-E-siliculosus-1a_M_contig8:1690004..16901061622936194.0196185-CDS-E-siliculosus-1a_M_contig8:1690004..1690106Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1690005..1690106 +
1696250971.6494858-CDS-E-siliculosus-1a_M_contig8:1690004..16901061696250971.6494858-CDS-E-siliculosus-1a_M_contig8:1690004..1690106Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1690005..1690106 +
1622936194.0412564-CDS-E-siliculosus-1a_M_contig8:1690344..16904851622936194.0412564-CDS-E-siliculosus-1a_M_contig8:1690344..1690485Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1690345..1690485 +
1696250971.6612103-CDS-E-siliculosus-1a_M_contig8:1690344..16904851696250971.6612103-CDS-E-siliculosus-1a_M_contig8:1690344..1690485Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1690345..1690485 +
1622936194.0603502-CDS-E-siliculosus-1a_M_contig8:1690914..16911961622936194.0603502-CDS-E-siliculosus-1a_M_contig8:1690914..1691196Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1690915..1691196 +
1696250971.6753025-CDS-E-siliculosus-1a_M_contig8:1690914..16911961696250971.6753025-CDS-E-siliculosus-1a_M_contig8:1690914..1691196Ectocarpus siliculosus Ec864m_EcPH12_78m maleCDSE-siliculosus-1a_M_contig8 1690915..1691196 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_M_contig8.16180.1

>prot_E-siliculosus-1a_M_contig8.16180.1 ID=prot_E-siliculosus-1a_M_contig8.16180.1|Name=mRNA_E-siliculosus-1a_M_contig8.16180.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=polypeptide|length=470bp
MAMVARRLGPVQTVVLRRTGLGDGSLLLPASRTIASIPGPINKASPKPSR
RSPSCRNTYSTSAARGTAPVVTMQPLKGPPCVLRSSGSVGGNSATCIRRN
LHCNSGRAVATADWLRPPVGAVLLRQGDASRAGGMPSPSAVNQLPTGGHG
VVFLQAAGVRTMSRVFAPATGGAAGKKPGGEATSPSQPGSGNGHSSKTPP
SPSEIRQPAGSGGRGASNNMDPPAAKPNNPQAAEKPAGSIGDNERTVKGG
NPDLRDREGTFVEMRDRIRHARADASEDAKDWMRDKRDDMNTMKETLRDA
RRDLRNARRDGTLGAQLSDQAKESSNRLQDLWRKYGAVGIGTYFGIYFGS
IAIFYGIYDYGVLTSLPSGGTAVIEHMQEWMKNAPEWAQGYSDRLFGAMV
EDHRARSFVLAWATCKVLEPVRLLGAIAITPRMARALGRAPAKVSDADED
EGSDADDGSGGSRKQGSTR*
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mRNA from alignment at E-siliculosus-1a_M_contig8:1688469..1691890+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_M_contig8.16180.1 ID=mRNA_E-siliculosus-1a_M_contig8.16180.1|Name=mRNA_E-siliculosus-1a_M_contig8.16180.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=mRNA|length=3422bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1688469..1691890+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
GCGGCAGAAGAAAGGCTCTAGACTATGGCTATGGTTGCGCGAAGGCTAGG
ACCAGTGCAAACTGTTGTGTTGCGACGGACTGGGCTTGGCGATGGCTCTC
TGCTTCTCCCTGCATCGAGAACGATAGCGTCGATTCCCGGGCCGATCAAC
AAGGCCTCCCCGAAGCCGAGTCGGAGGAGCCCGTCATGCAGGAACACGTA
CTCAACATCGGCAGCACGAGGAACCGCCCCTGTGGTCACGATGCAACCGC
TGAAAGGGCCGCCGTGTGTACTCAGGTCTAGCGGTAGTGTTGGCGGGAAT
AGCGCCACTTGCATTCGGCGCAACCTGCATTGCAACAGCGGTAGAGCTGT
TGCTACTGCAGACTGGCTGCGCCCTCCGGTCGGCGCTGTGCTGCTGCGCC
AGGGCGATGCATCAAGGGCGGGAGGGATGCCTTCGCCAAGCGCGGTGAAT
CAATTACCAACGGGAGGGCACGGTGTAGTGTTCCTGCAGGCGGCAGGCGT
GCGGACAATGTCGCGCGTGTTCGCACCTGCTACCGGTGGCGCTGCTGGCA
AGAAACCGGGAGGGGAGGCCACCTCCCCGTCACAACCGGGGAGCGGTAAC
GGTCATAGCAGCAAGACTCCGCCGTCCCCCAGTGAGATTCGACAACCAGC
GGGTTCCGGAGGTCGTGGTGCAAGCAACAACATGGACCCTCCTGCGGCGA
AACCAAACAACCCTCAAGCCGCTGAAAAACCAGCAGGGTCGATAGGCGAC
AACGAGCGAACCGTCAAGGGTGGAAATCCTGATCTTCGGGATCGGGAAGG
CACCTTCGTCGAGATGCGCGACAGGATAAGGCACGCCAGGGCCGACGCCA
GCGAGGACGCCAAGGACTGGATGAGGGACAAGAGAGACGACATGAACACC
ATGAAAGAGGTATGGAACCCATCAGCCCCCTGTCAAATACAGGAAAATTC
TAACTACAGTAGCAGTAGTGCGTTGATCTTACATGATGCGGCGTCATCAG
TAGCTCGAGCCACAAGGCATTGGAGAAGAGAAGCCTGACCAGAGGCATAT
TCATGACTACTGTTGCATGGGAACGGTGCTCACTTACGCCGGCAGAGACA
AAGGTGCCGGAGATGAATTGTCTTGTATGTACAACAACGATGTTCTTTTT
CTTTCTGGTGGAAATAGAAACTCCGAAGGCAGCTTTGGACCCAGCTGCTG
CTACACGCACGCCCTGCGGCCCTTCCGTCTACGCTCTCTGCCTCTGTCCG
TTCTCTTTCCGCACACCCTCCTGTCGGTGGTCGCGTTCGCAAGAATGCGT
GTCATTTTTACCTCTTCTTCTTTGCTGCATATGCATACCTCCGTGAAACG
TCGAAATATTGATCTTTGTTCTCGGATGTCCGAGACAAGGAGGCAAACCG
AAGATCTCCCCCGTATCACTTTCATGCGTTCTCGCGCAACTGCGACACGT
GCGTTGTTGTCCCTTGCTCCCTTGCTCACCAATTCACCCCCACTTCGGCC
CATGAAATGGGTTTTGACCATGCCGCCTCTTGGCAGACCCTGAGAGATGC
CCGTCGAGACTTGAGAAACGCTCGCCGGGACGGGACGCTAGGAGCGCAGC
TTTCCGACCAGGCCAAGGAGAGCTCGAATCGCCTGCAGGTTGGTTTTTGC
CGTCCTTGTGCTGTGCCATCCTTAGTTGATTCCGGTGTGTTTTCTCGTTC
ACTCGTGTCGAAAGCCCGAAGCGATGGCTGCCTTTGTTTCAAAGACAGGC
AAGCACGCGCGCCCCCGGGCGGGAGAGAGCAGCAGCGGTGGCCACAACCA
CAGGCGGGGTGCCCTTTACGTCTGACATTCATTATTCATGTTCCAACTCG
CACGACGGCAAACTATTGAATGGCAGGATCTCTGGCGCAAGTACGGGGCG
GTGGGCATCGGGACGTACTTCGGCATCTATTTCGGGAGTATCGCGATCTT
CTACGGGATCTACGACTACGGCGTCTTGACCAGTCTGCCCTCGGGTGGTA
CGGCGGTGATCGAGCACGTGAGATTTATTGCCGTCCCCCCACCACCTGGT
TGGATAGATACAGGGTTGCCGAAATAGTTCGGAATAGGAGGGTTACAAAA
CGCCTACTCCGTTCAGTGTTGGAAGCCGTATCCTTTGAGTATGTGTACCA
CGGCGTTCGTCGTATTGAGAATGGGTGATGATCAGAACGGCGTTGGCATC
TGCAACAGGGCGCCCGTTCGGTTGTTCGGAGTGGTGTCCCCTACCTCTCC
ACAAGGGGCGATACTTAGCGTGCATCGTAGTCATGCCGTACGCAAGGCAG
GATTCGGACTGCAGCTCTGGTGACAGGAAAAACCAAACCCTCGTTTCAAG
AACCGAAGCGCTGGGTCAATCGATGGCCGATGATATACCCCAGACGACGC
CCCCCTGTCTGTTTTGGGGACCTGTGTTCGTGGTTTTCGCTGTCAGATGC
AAGAATGGATGAAGAACGCGCCGGAGTGGGCCCAGGGCTATTCGGACAGG
CTTTTCGGGGCCATGGTCGAGGACCACCGCGCTCGAAGCTTTGTCCTCGC
CTGGGCCACGTGTAAGGTGCTCGAGCCGGTGCGGCTGCTTGGCGCGATTG
CCATCACGCCGAGGATGGCGCGTGCTCTGGGCAGAGCCCCCGCCAAGGTT
TCCGATGCCGACGAGGACGAGGGCTCGGATGCGGACGATGGTAGTGGGGG
TAGCAGGAAACAGGGTAGCACCCGATAGTTGCAATTGCGACGAACGGAGT
ACGTGGAAGCATCACGCAAGGAGTTTTGAGGGAGGCACTGTGCTGCGGCT
GTTGGGCTGAATCGCGACTCGATCGGCCAAGAAAAAGTTAATAATAGGGA
GACAGTGTTGGGACCCGATTGTTGTTGGTAGATGCGAAAAACGTATTTGT
TTTGCATCAGTTAGGCCGAATCTTTGGAGCTTCTCACAAGATCGATCAGC
ACATCCCGCGGGGCGTGTGACTCTCCAATATAGTTGGGGGAGTTGCTGCT
CGAAATCGAGCATAGAGTGTCTGTTATTGCTGTCCGATCACTTTAGAACT
CACCAAACCGGGCAGCCCTCCTAAGAACCTGTCGCTGAGTCGAAGAAAGC
ATCATGCGTCTTTCGTTTATCTCTTGCAGATTGTAGCTAAATCGCTCTGG
ACGACTCACAGATGAAGTGTGTGTGTTGCCGCGTCCGAGGGTTCGGCCGC
ATCACAAACGAGCGGTTTGCACTGTCGAACATTGCGTGTCTGACACTTGG
GGAAAGAGAGAGGGGTGGGCGTCGACATCCGACATCATTCGCTACACTTA
AAAGGGTTGCCGTTGGTGGTGTGTGCAAGGGTGTATCCAATCTACATCAG
AACCGCTTGTTGTTCGCGGGTGGGTGCCCGTGAGATCACGTTTGCATGCG
CCCGCGGTAGGAGAAACCGCCG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_M_contig8:1688469..1691890+

>mRNA_E-siliculosus-1a_M_contig8.16180.1 ID=mRNA_E-siliculosus-1a_M_contig8.16180.1|Name=mRNA_E-siliculosus-1a_M_contig8.16180.1|organism=Ectocarpus siliculosus Ec864m_EcPH12_78m male|type=CDS|length=2820bp|location=Sequence derived from alignment at E-siliculosus-1a_M_contig8:1688469..1691890+ (Ectocarpus siliculosus Ec864m_EcPH12_78m male)
ATGGCTATGGTTGCGCGAAGGCTAGGACCAGTGCAAACTGTTGTGTTGCG
ACGGACTGGGCTTGGCGATGGCTCTCTGCTTCTCCCTGCATCGAGAACGA
TAGCGTCGATTCCCGGGCCGATCAACAAGGCCTCCCCGAAGCCGAGTCGG
AGGAGCCCGTCATGCAGGAACACGTACTCAACATCGGCAGCACGAGGAAC
CGCCCCTGTGGTCACGATGCAACCGCTGAAAGGGCCGCCGTGTGTACTCA
GGTCTAGCGGTAGTGTTGGCGGGAATAGCGCCACTTGCATTCGGCGCAAC
CTGCATTGCAACAGCGGTAGAGCTGTTGCTACTGCAGACTGGCTGCGCCC
TCCGGTCGGCGCTGTGCTGCTGCGCCAGGGCGATGCATCAAGGGCGGGAG
GGATGCCTTCGCCAAGCGCGGTGAATCAATTACCAACGGGAGGGCACGGT
GTAGTGTTCCTGCAGGCGGCAGGCGTGCGGACAATGTCGCGCGTGTTCGC
ACCTGCTACCGGTGGCGCTGCTGGCAAGAAACCGGGAGGGGAGGCCACCT
CCCCGTCACAACCGGGGAGCGGTAACGGTCATAGCAGCAAGACTCCGCCG
TCCCCCAGTGAGATTCGACAACCAGCGGGTTCCGGAGGTCGTGGTGCAAG
CAACAACATGGACCCTCCTGCGGCGAAACCAAACAACCCTCAAGCCGCTG
AAAAACCAGCAGGGTCGATAGGCGACAACGAGCGAACCGTCAAGGGTGGA
AATCCTGATCTTCGGGATCGGGAAGGCACCTTCGTCGAGATGCGCGACAG
GATAAGGCACGCCAGGGCCGACGCCAGCGAGGACGCCAAGGACTGGATGA
GGGACAAGAGAGACGACATGAACACCATGAAAGAGATGGCTATGGTTGCG
CGAAGGCTAGGACCAGTGCAAACTGTTGTGTTGCGACGGACTGGGCTTGG
CGATGGCTCTCTGCTTCTCCCTGCATCGAGAACGATAGCGTCGATTCCCG
GGCCGATCAACAAGGCCTCCCCGAAGCCGAGTCGGAGGAGCCCGTCATGC
AGGAACACGTACTCAACATCGGCAGCACGAGGAACCGCCCCTGTGGTCAC
GATGCAACCGCTGAAAGGGCCGCCGTGTGTACTCAGGTCTAGCGGTAGTG
TTGGCGGGAATAGCGCCACTTGCATTCGGCGCAACCTGCATTGCAACAGC
GGTAGAGCTGTTGCTACTGCAGACTGGCTGCGCCCTCCGGTCGGCGCTGT
GCTGCTGCGCCAGGGCGATGCATCAAGGGCGGGAGGGATGCCTTCGCCAA
GCGCGGTGAATCAATTACCAACGGGAGGGCACGGTGTAGTGTTCCTGCAG
GCGGCAGGCGTGCGGACAATGTCGCGCGTGTTCGCACCTGCTACCGGTGG
CGCTGCTGGCAAGAAACCGGGAGGGGAGGCCACCTCCCCGTCACAACCGG
GGAGCGGTAACGGTCATAGCAGCAAGACTCCGCCGTCCCCCAGTGAGATT
CGACAACCAGCGGGTTCCGGAGGTCGTGGTGCAAGCAACAACATGGACCC
TCCTGCGGCGAAACCAAACAACCCTCAAGCCGCTGAAAAACCAGCAGGGT
CGATAGGCGACAACGAGCGAACCGTCAAGGGTGGAAATCCTGATCTTCGG
GATCGGGAAGGCACCTTCGTCGAGATGCGCGACAGGATAAGGCACGCCAG
GGCCGACGCCAGCGAGGACGCCAAGGACTGGATGAGGGACAAGAGAGACG
ACATGAACACCATGAAAGAGACCCTGAGAGATGCCCGTCGAGACTTGAGA
AACGCTCGCCGGGACGGGACGCTAGGAGCGCAGCTTTCCGACCAGGCCAA
GGAGAGCTCGAATCGCCTGCAGACCCTGAGAGATGCCCGTCGAGACTTGA
GAAACGCTCGCCGGGACGGGACGCTAGGAGCGCAGCTTTCCGACCAGGCC
AAGGAGAGCTCGAATCGCCTGCAGGATCTCTGGCGCAAGTACGGGGCGGT
GGGCATCGGGACGTACTTCGGCATCTATTTCGGGAGTATCGCGATCTTCT
ACGGGATCTACGACTACGGCGTCTTGACCAGTCTGCCCTCGGGTGGTACG
GCGGTGATCGAGCACGATCTCTGGCGCAAGTACGGGGCGGTGGGCATCGG
GACGTACTTCGGCATCTATTTCGGGAGTATCGCGATCTTCTACGGGATCT
ACGACTACGGCGTCTTGACCAGTCTGCCCTCGGGTGGTACGGCGGTGATC
GAGCACATGCAAGAATGGATGAAGAACGCGCCGGAGTGGGCCCAGGGCTA
TTCGGACAGGCTTTTCGGGGCCATGGTCGAGGACCACCGCGCTCGAAGCT
TTGTCCTCGCCTGGGCCACGTGTAAGGTGCTCGAGCCGGTGCGGCTGCTT
GGCGCGATTGCCATCACGCCGAGGATGGCGCGTGCTCTGGGCAGAGCCCC
CGCCAAGGTTTCCGATGCCGACGAGGACGAGGGCTCGGATGCGGACGATG
GTAGTGGGGGTAGCAGGAAACAGGGTAGCACCCGATAGATGCAAGAATGG
ATGAAGAACGCGCCGGAGTGGGCCCAGGGCTATTCGGACAGGCTTTTCGG
GGCCATGGTCGAGGACCACCGCGCTCGAAGCTTTGTCCTCGCCTGGGCCA
CGTGTAAGGTGCTCGAGCCGGTGCGGCTGCTTGGCGCGATTGCCATCACG
CCGAGGATGGCGCGTGCTCTGGGCAGAGCCCCCGCCAAGGTTTCCGATGC
CGACGAGGACGAGGGCTCGGATGCGGACGATGGTAGTGGGGGTAGCAGGA
AACAGGGTAGCACCCGATAG
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